RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
SDCCAG3-208ENST00000466579 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
SDCCAG3-208ENST00000466579 IGLV6-57P01721 117 aa5.65□□□□□ -1.5
SDCCAG3-208ENST00000466579 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.5
SDCCAG3-208ENST00000466579 SPANXDQ9BXN6 97 aa5.65□□□□□ -1.5
SDCCAG3-208ENST00000466579 SPANXCQ9NY87 97 aa5.65□□□□□ -1.5
SDCCAG3-208ENST00000466579 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
SDCCAG3-208ENST00000466579 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
SDCCAG3-208ENST00000466579 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
SDCCAG3-208ENST00000466579 DDTP30046 118 aa5.63□□□□□ -1.51
SDCCAG3-208ENST00000466579 RPL13AP40429 203 aaKnown RBP5.63□□□□□ -1.51
SDCCAG3-208ENST00000466579 PRLHP81277 87 aa5.63□□□□□ -1.51
SDCCAG3-208ENST00000466579 Q6ZVH6 145 aa5.63□□□□□ -1.51
SDCCAG3-208ENST00000466579 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
SDCCAG3-208ENST00000466579 A0A087X002 238 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 B5MCH6 92 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 IFITM1P13164 125 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 NPC2P61916 151 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 S100A12P80511 92 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 SCGB1D4Q6XE38 83 aa5.61□□□□□ -1.51
SDCCAG3-208ENST00000466579 HSBP1L1C9JCN9 74 aa5.6□□□□□ -1.51
SDCCAG3-208ENST00000466579 LINC00518Q8N0U6 118 aa5.6□□□□□ -1.51
SDCCAG3-208ENST00000466579 COPS9Q8WXC6 57 aa5.6□□□□□ -1.51
SDCCAG3-208ENST00000466579 CBY1Q9Y3M2 126 aa5.6□□□□□ -1.51
SDCCAG3-208ENST00000466579 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 SCGB1D1O95968 90 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 CRYGAP11844 174 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 S100A7L2Q5SY68 101 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.51
SDCCAG3-208ENST00000466579 ZNF73O43830 326 aaPredicted RBP5.58□□□□□ -1.52
SDCCAG3-208ENST00000466579 Q6ZRX8 168 aa5.58□□□□□ -1.52
SDCCAG3-208ENST00000466579 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
SDCCAG3-208ENST00000466579 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
SDCCAG3-208ENST00000466579 JOSD1Q15040 202 aaPredicted RBP5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 MUSTN1Q8IVN3 82 aa5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 Q9BRP9 147 aa5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 ANAPC11Q9NYG5 84 aa5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 ZNF706Q9Y5V0 76 aaPredicted RBP5.57□□□□□ -1.52
SDCCAG3-208ENST00000466579 DLEU1O43261 78 aa5.56□□□□□ -1.52
SDCCAG3-208ENST00000466579 COX8AP10176 69 aa5.56□□□□□ -1.52
SDCCAG3-208ENST00000466579 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
SDCCAG3-208ENST00000466579 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
SDCCAG3-208ENST00000466579 TRBV7-6A0A0J9YX20 115 aa5.54□□□□□ -1.52
SDCCAG3-208ENST00000466579 CTAG1AP78358 180 aa5.54□□□□□ -1.52
SDCCAG3-208ENST00000466579 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
SDCCAG3-208ENST00000466579 LRP2P98164 4655 aa5.53□□□□□ -1.52
SDCCAG3-208ENST00000466579 A6NJY4 79 aa5.53□□□□□ -1.52
SDCCAG3-208ENST00000466579 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
SDCCAG3-208ENST00000466579 TRAV13-2A0A0B4J235 113 aa5.52□□□□□ -1.53
SDCCAG3-208ENST00000466579 HINT1P49773 126 aaPredicted RBP5.52□□□□□ -1.53
SDCCAG3-208ENST00000466579 ELOF1P60002 83 aaKnown RBP5.52□□□□□ -1.53
SDCCAG3-208ENST00000466579 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 SPATA45Q537H7 98 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 VAMP8Q9BV40 100 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 HIGD1BQ9P298 99 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 PAM16Q9Y3D7 125 aa5.51□□□□□ -1.53
SDCCAG3-208ENST00000466579 A4D1N5 150 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 SPRR1BP22528 89 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 COX7BP24311 80 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 C14orf144Q96I85 54 aa5.5□□□□□ -1.53
SDCCAG3-208ENST00000466579 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
SDCCAG3-208ENST00000466579 A6NDN8 102 aa5.49□□□□□ -1.53
SDCCAG3-208ENST00000466579 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
SDCCAG3-208ENST00000466579 C2orf91Q6ZV80 131 aa5.49□□□□□ -1.53
SDCCAG3-208ENST00000466579 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
SDCCAG3-208ENST00000466579 SPAG11AQ6PDA7 123 aa5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 SMIM11BQ8TCY0 68 aa5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 HIST1H4GQ99525 98 aa5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 TMA7Q9Y2S6 64 aaKnown RBP5.48□□□□□ -1.53
SDCCAG3-208ENST00000466579 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
SDCCAG3-208ENST00000466579 TSPAN13O95857 204 aa5.46□□□□□ -1.54
SDCCAG3-208ENST00000466579 TAL2Q16559 108 aa5.46□□□□□ -1.54
SDCCAG3-208ENST00000466579 LPAP08519 4548 aa5.46□□□□□ -1.54
SDCCAG3-208ENST00000466579 Q8NBF4 154 aa5.45□□□□□ -1.54
SDCCAG3-208ENST00000466579 IGLV5-48A0A075B6I7 105 aa5.44□□□□□ -1.54
SDCCAG3-208ENST00000466579 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
SDCCAG3-208ENST00000466579 CFC1P0CG37 223 aa5.44□□□□□ -1.54
SDCCAG3-208ENST00000466579 LINC01547P58512 204 aaPredicted RBP5.44□□□□□ -1.54
SDCCAG3-208ENST00000466579 MOBPQ13875 183 aa5.44□□□□□ -1.54
SDCCAG3-208ENST00000466579 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
SDCCAG3-208ENST00000466579 SPINK1P00995 79 aa5.43□□□□□ -1.54
SDCCAG3-208ENST00000466579 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
SDCCAG3-208ENST00000466579 CEND1Q8N111 149 aa5.43□□□□□ -1.54
SDCCAG3-208ENST00000466579 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
SDCCAG3-208ENST00000466579 IGLV9-49A0A0B4J1Y8 123 aa5.42□□□□□ -1.54
SDCCAG3-208ENST00000466579 TEX49A0A1B0GTD5 131 aa5.42□□□□□ -1.54
SDCCAG3-208ENST00000466579 VAMP3Q15836 100 aa5.42□□□□□ -1.54
SDCCAG3-208ENST00000466579 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
SDCCAG3-208ENST00000466579 C12orf57Q99622 126 aa5.42□□□□□ -1.54
SDCCAG3-208ENST00000466579 PRR4Q16378 134 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms