RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ERC2-IT1O76042 136 aa10.47□□□□□ -0.73
SRSF4-202ENST00000466448 B5MCH6 92 aa10.46□□□□□ -0.73
SRSF4-202ENST00000466448 J3QQQ9 107 aa10.46□□□□□ -0.73
SRSF4-202ENST00000466448 NMUP48645 174 aa10.46□□□□□ -0.73
SRSF4-202ENST00000466448 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
SRSF4-202ENST00000466448 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
SRSF4-202ENST00000466448 XP32Q5T750 250 aa10.45□□□□□ -0.74
SRSF4-202ENST00000466448 SSBP3-AS1Q7Z2R9 100 aa10.45□□□□□ -0.74
SRSF4-202ENST00000466448 SLC25A20O43772 301 aa10.44□□□□□ -0.74
SRSF4-202ENST00000466448 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
SRSF4-202ENST00000466448 S100A12P80511 92 aa10.43□□□□□ -0.74
SRSF4-202ENST00000466448 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
SRSF4-202ENST00000466448 Q9BRP9 147 aa10.43□□□□□ -0.74
SRSF4-202ENST00000466448 CRCT1Q9UGL9 99 aa10.42□□□□□ -0.74
SRSF4-202ENST00000466448 E9PLD3 99 aa10.41□□□□□ -0.74
SRSF4-202ENST00000466448 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
SRSF4-202ENST00000466448 C3orf79P0CE67 100 aa10.4□□□□□ -0.74
SRSF4-202ENST00000466448 DDTP30046 118 aa10.4□□□□□ -0.74
SRSF4-202ENST00000466448 Q6ZRX8 168 aa10.4□□□□□ -0.74
SRSF4-202ENST00000466448 KRTDAPP60985 99 aa10.39□□□□□ -0.75
SRSF4-202ENST00000466448 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
SRSF4-202ENST00000466448 C20orf202A1L168 122 aa10.38□□□□□ -0.75
SRSF4-202ENST00000466448 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
SRSF4-202ENST00000466448 TRBV10-2A0A0K0K1G8 114 aa10.37□□□□□ -0.75
SRSF4-202ENST00000466448 AKR1D1P51857 326 aa10.36□□□□□ -0.75
SRSF4-202ENST00000466448 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
SRSF4-202ENST00000466448 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
SRSF4-202ENST00000466448 MIEN1Q9BRT3 115 aa10.34□□□□□ -0.75
SRSF4-202ENST00000466448 SPANXB1Q9NS25 103 aaPredicted RBP10.34□□□□□ -0.75
SRSF4-202ENST00000466448 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
SRSF4-202ENST00000466448 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
SRSF4-202ENST00000466448 S100A6P06703 90 aa10.31□□□□□ -0.76
SRSF4-202ENST00000466448 S100A2P29034 98 aa10.31□□□□□ -0.76
SRSF4-202ENST00000466448 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
SRSF4-202ENST00000466448 TRAV23DV6A0A075B6W5 121 aa10.3□□□□□ -0.76
SRSF4-202ENST00000466448 MT1HP80294 61 aa10.3□□□□□ -0.76
SRSF4-202ENST00000466448 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
SRSF4-202ENST00000466448 ST20-AS1Q8NBB2 130 aa10.3□□□□□ -0.76
SRSF4-202ENST00000466448 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
SRSF4-202ENST00000466448 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
SRSF4-202ENST00000466448 TIMM17BO60830 172 aa10.28□□□□□ -0.76
SRSF4-202ENST00000466448 NDUFC2O95298 119 aa10.28□□□□□ -0.76
SRSF4-202ENST00000466448 ZNF73O43830 326 aaPredicted RBP10.27□□□□□ -0.77
SRSF4-202ENST00000466448 PCOTHQ58A44 107 aa10.27□□□□□ -0.77
SRSF4-202ENST00000466448 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
SRSF4-202ENST00000466448 HIST1H2BLQ99880 126 aa10.26□□□□□ -0.77
SRSF4-202ENST00000466448 IGLV8-61A0A075B6I0 122 aa10.25□□□□□ -0.77
SRSF4-202ENST00000466448 EIF4EBP3O60516 100 aaPredicted RBP10.25□□□□□ -0.77
SRSF4-202ENST00000466448 SNRPEP62304 92 aaKnown RBP10.25□□□□□ -0.77
SRSF4-202ENST00000466448 NPC2P61916 151 aa10.24□□□□□ -0.77
SRSF4-202ENST00000466448 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
SRSF4-202ENST00000466448 ATOH7Q8N100 152 aa10.23□□□□□ -0.77
SRSF4-202ENST00000466448 LITAFQ99732 161 aa10.23□□□□□ -0.77
SRSF4-202ENST00000466448 C9orf92A6NGG3 77 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 TTTY13Q9BZ97 58 aa10.22□□□□□ -0.77
SRSF4-202ENST00000466448 CFC1BP0CG36 223 aa10.21□□□□□ -0.77
SRSF4-202ENST00000466448 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
SRSF4-202ENST00000466448 SPRR1BP22528 89 aa10.2□□□□□ -0.78
SRSF4-202ENST00000466448 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
SRSF4-202ENST00000466448 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
SRSF4-202ENST00000466448 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
SRSF4-202ENST00000466448 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
SRSF4-202ENST00000466448 HINT1P49773 126 aaPredicted RBP10.18□□□□□ -0.78
SRSF4-202ENST00000466448 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
SRSF4-202ENST00000466448 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
SRSF4-202ENST00000466448 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
SRSF4-202ENST00000466448 Q6ZVH6 145 aa10.16□□□□□ -0.78
SRSF4-202ENST00000466448 LINC00518Q8N0U6 118 aa10.16□□□□□ -0.78
SRSF4-202ENST00000466448 IFITM1P13164 125 aa10.15□□□□□ -0.78
SRSF4-202ENST00000466448 KRTAP10-6P60371 365 aaPredicted RBP10.15□□□□□ -0.78
SRSF4-202ENST00000466448 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
SRSF4-202ENST00000466448 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
SRSF4-202ENST00000466448 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
SRSF4-202ENST00000466448 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
SRSF4-202ENST00000466448 SCGB1D1O95968 90 aa10.12□□□□□ -0.79
SRSF4-202ENST00000466448 H7C2G1 150 aa10.09□□□□□ -0.79
SRSF4-202ENST00000466448 CD164Q04900 197 aa10.09□□□□□ -0.79
SRSF4-202ENST00000466448 Q1RN00 199 aa10.09□□□□□ -0.79
SRSF4-202ENST00000466448 ELOF1P60002 83 aaKnown RBP10.08□□□□□ -0.8
SRSF4-202ENST00000466448 MUSTN1Q8IVN3 82 aa10.07□□□□□ -0.8
SRSF4-202ENST00000466448 PRO1933Q9H354 126 aa10.07□□□□□ -0.8
SRSF4-202ENST00000466448 M0R2T5 61 aa10.06□□□□□ -0.8
SRSF4-202ENST00000466448 COX7BP24311 80 aa10.06□□□□□ -0.8
SRSF4-202ENST00000466448 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
SRSF4-202ENST00000466448 TAL2Q16559 108 aa10.05□□□□□ -0.8
SRSF4-202ENST00000466448 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
SRSF4-202ENST00000466448 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
SRSF4-202ENST00000466448 Q5XG85 94 aa10.04□□□□□ -0.8
SRSF4-202ENST00000466448 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
SRSF4-202ENST00000466448 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
SRSF4-202ENST00000466448 A6NDN8 102 aa10.02□□□□□ -0.81
SRSF4-202ENST00000466448 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
SRSF4-202ENST00000466448 COX6B2Q6YFQ2 88 aa10.01□□□□□ -0.81
SRSF4-202ENST00000466448 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
SRSF4-202ENST00000466448 A0A0G2JQZ4 141 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms