RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 C9JAW5 83 aa6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 ZNF625Q96I27 306 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
RTFDC1-205ENST00000466260 CXCL5P42830 114 aa6.15□□□□□ -1.42
RTFDC1-205ENST00000466260 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
RTFDC1-205ENST00000466260 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.42
RTFDC1-205ENST00000466260 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
RTFDC1-205ENST00000466260 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.42
RTFDC1-205ENST00000466260 H7C2G1 150 aa6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 LST1O00453 97 aa6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 TRIAP1O43715 76 aa6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 C6orf48Q9UBA6 75 aa6.14□□□□□ -1.43
RTFDC1-205ENST00000466260 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 TRACP01848 142 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 ACYP1P07311 99 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 KIAA0087Q14695 138 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 GAGE2EQ4V326 116 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 GAGE2DQ9UEU5 116 aa6.13□□□□□ -1.43
RTFDC1-205ENST00000466260 A0A1B0GV72 72 aa6.12□□□□□ -1.43
RTFDC1-205ENST00000466260 H0YGX0 51 aa6.12□□□□□ -1.43
RTFDC1-205ENST00000466260 SNCGO76070 127 aa6.12□□□□□ -1.43
RTFDC1-205ENST00000466260 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
RTFDC1-205ENST00000466260 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 CKS1BP61024 79 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 COX17Q14061 63 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 C9orf116Q5BN46 136 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 C6orf226Q5I0X4 101 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 Q6ZRP5 223 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 Q8IZM0 81 aa6.11□□□□□ -1.43
RTFDC1-205ENST00000466260 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
RTFDC1-205ENST00000466260 F8WDY8 70 aa6.1□□□□□ -1.43
RTFDC1-205ENST00000466260 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-205ENST00000466260 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-205ENST00000466260 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
RTFDC1-205ENST00000466260 A0A1B0GX51 115 aa6.09□□□□□ -1.43
RTFDC1-205ENST00000466260 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
RTFDC1-205ENST00000466260 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-205ENST00000466260 DNAL4O96015 105 aa6.08□□□□□ -1.44
RTFDC1-205ENST00000466260 LINC00158P58513 81 aa6.08□□□□□ -1.44
RTFDC1-205ENST00000466260 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-205ENST00000466260 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
RTFDC1-205ENST00000466260 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
RTFDC1-205ENST00000466260 NDUFC2O95298 119 aa6.07□□□□□ -1.44
RTFDC1-205ENST00000466260 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
RTFDC1-205ENST00000466260 Q6Q795 121 aa6.07□□□□□ -1.44
RTFDC1-205ENST00000466260 MIR7-3HGQ8N6C7 128 aa6.07□□□□□ -1.44
RTFDC1-205ENST00000466260 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
RTFDC1-205ENST00000466260 H3BQ85 93 aa6.06□□□□□ -1.44
RTFDC1-205ENST00000466260 NPC2P61916 151 aa6.06□□□□□ -1.44
RTFDC1-205ENST00000466260 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
RTFDC1-205ENST00000466260 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
RTFDC1-205ENST00000466260 UBE2BP63146 152 aa6.05□□□□□ -1.44
RTFDC1-205ENST00000466260 C9orf129Q5T035 196 aaKnown RBP6.05□□□□□ -1.44
RTFDC1-205ENST00000466260 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
RTFDC1-205ENST00000466260 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
RTFDC1-205ENST00000466260 DAND5Q8N907 189 aa6.04□□□□□ -1.44
RTFDC1-205ENST00000466260 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
RTFDC1-205ENST00000466260 C1orf137Q5JT78 98 aa6.03□□□□□ -1.44
RTFDC1-205ENST00000466260 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
RTFDC1-205ENST00000466260 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
RTFDC1-205ENST00000466260 CLEC2BQ92478 149 aa6.03□□□□□ -1.44
RTFDC1-205ENST00000466260 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
RTFDC1-205ENST00000466260 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
RTFDC1-205ENST00000466260 PFN2P35080 140 aa6.02□□□□□ -1.45
RTFDC1-205ENST00000466260 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
RTFDC1-205ENST00000466260 KRTAP7-1Q8IUC3 87 aa6.02□□□□□ -1.45
RTFDC1-205ENST00000466260 TMEM126AQ9H061 195 aa6.02□□□□□ -1.45
RTFDC1-205ENST00000466260 OXTP01178 125 aa6.01□□□□□ -1.45
RTFDC1-205ENST00000466260 BAALC-AS2P0C853 105 aa6.01□□□□□ -1.45
RTFDC1-205ENST00000466260 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
RTFDC1-205ENST00000466260 TEX49A0A1B0GTD5 131 aa6□□□□□ -1.45
RTFDC1-205ENST00000466260 JMJD7-PLA2G4BH0Y9G9 81 aa5.99□□□□□ -1.45
RTFDC1-205ENST00000466260 LINC00643Q86TS7 51 aa5.99□□□□□ -1.45
RTFDC1-205ENST00000466260 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
RTFDC1-205ENST00000466260 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
RTFDC1-205ENST00000466260 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 MT-ATP8P03928 68 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 S100A7L2Q5SY68 101 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 LINC00337Q8N6G1 96 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 SMIM11BQ8TCY0 68 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 ORMDL1Q9P0S3 153 aa5.98□□□□□ -1.45
RTFDC1-205ENST00000466260 HERC1Q15751 4861 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 TRBV7-7A0A0K0K1E9 115 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 TMEM256-PLSCR3K7ERE1 68 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
RTFDC1-205ENST00000466260 NKAPP1Q8N9T2 125 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms