RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MOBPQ13875 183 aa11.73□□□□□ -0.53
CSPG5-204ENST00000465441 SPANXB1Q9NS25 103 aaPredicted RBP11.71□□□□□ -0.53
CSPG5-204ENST00000465441 NDUFC2O95298 119 aa11.7□□□□□ -0.54
CSPG5-204ENST00000465441 LGALS3P17931 250 aaKnown RBP11.7□□□□□ -0.54
CSPG5-204ENST00000465441 NMUP48645 174 aa11.7□□□□□ -0.54
CSPG5-204ENST00000465441 Q6ZRX8 168 aa11.7□□□□□ -0.54
CSPG5-204ENST00000465441 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
CSPG5-204ENST00000465441 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
CSPG5-204ENST00000465441 ASB16-AS1Q495Z4 193 aa11.69□□□□□ -0.54
CSPG5-204ENST00000465441 S100A7L2Q5SY68 101 aa11.69□□□□□ -0.54
CSPG5-204ENST00000465441 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
CSPG5-204ENST00000465441 Q8N377 158 aa11.69□□□□□ -0.54
CSPG5-204ENST00000465441 S100A1P23297 94 aa11.68□□□□□ -0.54
CSPG5-204ENST00000465441 PET117Q6UWS5 81 aa11.68□□□□□ -0.54
CSPG5-204ENST00000465441 E9PLD3 99 aa11.67□□□□□ -0.54
CSPG5-204ENST00000465441 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
CSPG5-204ENST00000465441 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
CSPG5-204ENST00000465441 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
CSPG5-204ENST00000465441 NPC2P61916 151 aa11.65□□□□□ -0.54
CSPG5-204ENST00000465441 ADAMTSL4-AS1Q5T5F5 129 aa11.65□□□□□ -0.54
CSPG5-204ENST00000465441 TRAV23DV6A0A075B6W5 121 aa11.64□□□□□ -0.55
CSPG5-204ENST00000465441 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
CSPG5-204ENST00000465441 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CSPG5-204ENST00000465441 KRTAP4-1Q9BYQ7 146 aa11.64□□□□□ -0.55
CSPG5-204ENST00000465441 A0A0J9YXY3 114 aa11.63□□□□□ -0.55
CSPG5-204ENST00000465441 SLC25A20O43772 301 aa11.63□□□□□ -0.55
CSPG5-204ENST00000465441 SEC61BP60468 96 aaKnown RBP11.62□□□□□ -0.55
CSPG5-204ENST00000465441 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
CSPG5-204ENST00000465441 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
CSPG5-204ENST00000465441 C9orf153Q5TBE3 101 aa11.6□□□□□ -0.55
CSPG5-204ENST00000465441 KRTDAPP60985 99 aa11.59□□□□□ -0.55
CSPG5-204ENST00000465441 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
CSPG5-204ENST00000465441 C20orf202A1L168 122 aa11.55□□□□□ -0.56
CSPG5-204ENST00000465441 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
CSPG5-204ENST00000465441 LINC01547P58512 204 aaPredicted RBP11.54□□□□□ -0.56
CSPG5-204ENST00000465441 XP32Q5T750 250 aa11.54□□□□□ -0.56
CSPG5-204ENST00000465441 LITAFQ99732 161 aa11.54□□□□□ -0.56
CSPG5-204ENST00000465441 LINC00308Q8TCZ7 52 aa11.53□□□□□ -0.56
CSPG5-204ENST00000465441 CBY1Q9Y3M2 126 aa11.53□□□□□ -0.56
CSPG5-204ENST00000465441 TIMM17BO60830 172 aa11.52□□□□□ -0.57
CSPG5-204ENST00000465441 OR13C6PQ8NH95 151 aa11.52□□□□□ -0.57
CSPG5-204ENST00000465441 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
CSPG5-204ENST00000465441 AKR1D1P51857 326 aa11.51□□□□□ -0.57
CSPG5-204ENST00000465441 HIST3H2BBQ8N257 126 aa11.51□□□□□ -0.57
CSPG5-204ENST00000465441 SPANXCQ9NY87 97 aa11.51□□□□□ -0.57
CSPG5-204ENST00000465441 ZNF815PA8K554 130 aa11.5□□□□□ -0.57
CSPG5-204ENST00000465441 SPRR1BP22528 89 aa11.5□□□□□ -0.57
CSPG5-204ENST00000465441 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
CSPG5-204ENST00000465441 TTTY13Q9BZ97 58 aa11.48□□□□□ -0.57
CSPG5-204ENST00000465441 HRCT1Q6UXD1 115 aa11.47□□□□□ -0.57
CSPG5-204ENST00000465441 DHRS4-AS1Q9P1J3 65 aa11.47□□□□□ -0.57
CSPG5-204ENST00000465441 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.57
CSPG5-204ENST00000465441 S100A2P29034 98 aa11.45□□□□□ -0.58
CSPG5-204ENST00000465441 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
CSPG5-204ENST00000465441 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
CSPG5-204ENST00000465441 SPANXDQ9BXN6 97 aa11.44□□□□□ -0.58
CSPG5-204ENST00000465441 LAMTOR3Q9UHA4 124 aa11.44□□□□□ -0.58
CSPG5-204ENST00000465441 S100A6P06703 90 aa11.42□□□□□ -0.58
CSPG5-204ENST00000465441 COX7BP24311 80 aa11.42□□□□□ -0.58
CSPG5-204ENST00000465441 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
CSPG5-204ENST00000465441 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
CSPG5-204ENST00000465441 LINC00518Q8N0U6 118 aa11.42□□□□□ -0.58
CSPG5-204ENST00000465441 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
CSPG5-204ENST00000465441 ELOF1P60002 83 aaKnown RBP11.41□□□□□ -0.58
CSPG5-204ENST00000465441 TAL2Q16559 108 aa11.4□□□□□ -0.58
CSPG5-204ENST00000465441 SCGB1D4Q6XE38 83 aa11.39□□□□□ -0.59
CSPG5-204ENST00000465441 DEFB105AQ8NG35 78 aa11.39□□□□□ -0.59
CSPG5-204ENST00000465441 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
CSPG5-204ENST00000465441 Q1RN00 199 aa11.37□□□□□ -0.59
CSPG5-204ENST00000465441 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
CSPG5-204ENST00000465441 PCP2Q8IVA1 136 aa11.37□□□□□ -0.59
CSPG5-204ENST00000465441 TEX49A0A1B0GTD5 131 aa11.35□□□□□ -0.59
CSPG5-204ENST00000465441 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
CSPG5-204ENST00000465441 LCE2DQ5TA82 110 aaPredicted RBP11.35□□□□□ -0.59
CSPG5-204ENST00000465441 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
CSPG5-204ENST00000465441 CD164Q04900 197 aa11.34□□□□□ -0.59
CSPG5-204ENST00000465441 Q6ZVH6 145 aa11.34□□□□□ -0.59
CSPG5-204ENST00000465441 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
CSPG5-204ENST00000465441 IFITM1P13164 125 aa11.33□□□□□ -0.6
CSPG5-204ENST00000465441 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
CSPG5-204ENST00000465441 TRBV7-6A0A0J9YX20 115 aa11.32□□□□□ -0.6
CSPG5-204ENST00000465441 KRTAP19-2Q3LHN2 52 aa11.32□□□□□ -0.6
CSPG5-204ENST00000465441 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
CSPG5-204ENST00000465441 HSBP1L1C9JCN9 74 aa11.31□□□□□ -0.6
CSPG5-204ENST00000465441 H7C2G1 150 aa11.3□□□□□ -0.6
CSPG5-204ENST00000465441 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
CSPG5-204ENST00000465441 A6NDN8 102 aa11.28□□□□□ -0.6
CSPG5-204ENST00000465441 A0A0G2JQZ4 141 aa11.27□□□□□ -0.61
CSPG5-204ENST00000465441 Q5XG85 94 aa11.27□□□□□ -0.61
CSPG5-204ENST00000465441 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
CSPG5-204ENST00000465441 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
CSPG5-204ENST00000465441 C1orf195Q5TG92 126 aa11.25□□□□□ -0.61
CSPG5-204ENST00000465441 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
CSPG5-204ENST00000465441 MT1HP80294 61 aa11.23□□□□□ -0.61
CSPG5-204ENST00000465441 A4D1N5 150 aa11.2□□□□□ -0.62
CSPG5-204ENST00000465441 SMIM11BQ8TCY0 68 aa11.19□□□□□ -0.62
CSPG5-204ENST00000465441 TRAV13-2A0A0B4J235 113 aa11.18□□□□□ -0.62
CSPG5-204ENST00000465441 COX8AP10176 69 aa11.17□□□□□ -0.62
CSPG5-204ENST00000465441 NHP2Q9NX24 153 aaKnown RBP11.16□□□□□ -0.62
CSPG5-204ENST00000465441 DLEU1O43261 78 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms