RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
USP39-211ENST00000465282 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
USP39-211ENST00000465282 J3QL48 77 aa10.25□□□□□ -0.77
USP39-211ENST00000465282 HERC1Q15751 4861 aa10.25□□□□□ -0.77
USP39-211ENST00000465282 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
USP39-211ENST00000465282 KRTAP4-16G5E9R7 235 aaPredicted RBP10.24□□□□□ -0.77
USP39-211ENST00000465282 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
USP39-211ENST00000465282 TRAV23DV6A0A075B6W5 121 aa10.23□□□□□ -0.77
USP39-211ENST00000465282 PRLHP81277 87 aa10.22□□□□□ -0.77
USP39-211ENST00000465282 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
USP39-211ENST00000465282 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
USP39-211ENST00000465282 ZNF73O43830 326 aaPredicted RBP10.2□□□□□ -0.78
USP39-211ENST00000465282 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
USP39-211ENST00000465282 B5MCH6 92 aa10.19□□□□□ -0.78
USP39-211ENST00000465282 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
USP39-211ENST00000465282 TAL2Q16559 108 aa10.18□□□□□ -0.78
USP39-211ENST00000465282 A4D1N5 150 aa10.17□□□□□ -0.78
USP39-211ENST00000465282 A6NDN8 102 aa10.17□□□□□ -0.78
USP39-211ENST00000465282 Q6ZRX8 168 aa10.17□□□□□ -0.78
USP39-211ENST00000465282 C2orf91Q6ZV80 131 aa10.17□□□□□ -0.78
USP39-211ENST00000465282 HIGD2AQ9BW72 106 aa10.17□□□□□ -0.78
USP39-211ENST00000465282 MT1HL1P0DM35 61 aa10.16□□□□□ -0.78
USP39-211ENST00000465282 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
USP39-211ENST00000465282 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
USP39-211ENST00000465282 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
USP39-211ENST00000465282 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
USP39-211ENST00000465282 RPL13AP40429 203 aaKnown RBP10.14□□□□□ -0.79
USP39-211ENST00000465282 FAM229BQ4G0N7 80 aa10.13□□□□□ -0.79
USP39-211ENST00000465282 SMCR5Q8TEV8 140 aa10.13□□□□□ -0.79
USP39-211ENST00000465282 UQCR10Q9UDW1 63 aa10.13□□□□□ -0.79
USP39-211ENST00000465282 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
USP39-211ENST00000465282 TNXBP22105 4242 aa10.11□□□□□ -0.79
USP39-211ENST00000465282 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 A6NJY4 79 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 CRYGAP11844 174 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 ELOF1P60002 83 aaKnown RBP10.1□□□□□ -0.79
USP39-211ENST00000465282 CEND1Q8N111 149 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 Q9BRP9 147 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 DHRS4-AS1Q9P1J3 65 aa10.1□□□□□ -0.79
USP39-211ENST00000465282 COX7BP24311 80 aa10.09□□□□□ -0.79
USP39-211ENST00000465282 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
USP39-211ENST00000465282 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
USP39-211ENST00000465282 HSD52Q0P140 79 aa10.08□□□□□ -0.8
USP39-211ENST00000465282 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
USP39-211ENST00000465282 A0A0B4J2C4 111 aa10.07□□□□□ -0.8
USP39-211ENST00000465282 LOC105371267A0A1B0GV96 52 aa10.07□□□□□ -0.8
USP39-211ENST00000465282 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
USP39-211ENST00000465282 CFC1P0CG37 223 aa10.06□□□□□ -0.8
USP39-211ENST00000465282 VAMP3Q15836 100 aa10.06□□□□□ -0.8
USP39-211ENST00000465282 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
USP39-211ENST00000465282 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
USP39-211ENST00000465282 C12orf57Q99622 126 aa10.05□□□□□ -0.8
USP39-211ENST00000465282 A0A087X002 238 aa10.04□□□□□ -0.8
USP39-211ENST00000465282 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
USP39-211ENST00000465282 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
USP39-211ENST00000465282 ANAPC11Q9NYG5 84 aa10.03□□□□□ -0.8
USP39-211ENST00000465282 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
USP39-211ENST00000465282 FXYD2P54710 66 aa10.01□□□□□ -0.81
USP39-211ENST00000465282 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
USP39-211ENST00000465282 GAGE2AQ6NT46 116 aa10□□□□□ -0.81
USP39-211ENST00000465282 PRO1854Q9UHT4 67 aa10□□□□□ -0.81
USP39-211ENST00000465282 SLC25A20O43772 301 aa9.99□□□□□ -0.81
USP39-211ENST00000465282 KRTAP13-2Q52LG2 175 aa9.99□□□□□ -0.81
USP39-211ENST00000465282 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
USP39-211ENST00000465282 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
USP39-211ENST00000465282 H7C2G1 150 aa9.96□□□□□ -0.82
USP39-211ENST00000465282 SPRR1BP22528 89 aa9.96□□□□□ -0.82
USP39-211ENST00000465282 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
USP39-211ENST00000465282 ST20-AS1Q8NBB2 130 aa9.95□□□□□ -0.82
USP39-211ENST00000465282 H0YGX0 51 aa9.94□□□□□ -0.82
USP39-211ENST00000465282 CTAG1AP78358 180 aa9.94□□□□□ -0.82
USP39-211ENST00000465282 hADV29S1A0JD25 119 aa9.93□□□□□ -0.82
USP39-211ENST00000465282 Q1RN00 199 aa9.93□□□□□ -0.82
USP39-211ENST00000465282 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
USP39-211ENST00000465282 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
USP39-211ENST00000465282 SNCGO76070 127 aa9.92□□□□□ -0.82
USP39-211ENST00000465282 C3orf22Q8N5N4 141 aa9.92□□□□□ -0.82
USP39-211ENST00000465282 M0R143 59 aa9.91□□□□□ -0.82
USP39-211ENST00000465282 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
USP39-211ENST00000465282 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.82
USP39-211ENST00000465282 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.82
USP39-211ENST00000465282 LAMTOR3Q9UHA4 124 aa9.9□□□□□ -0.82
USP39-211ENST00000465282 IGLV9-49A0A0B4J1Y8 123 aa9.88□□□□□ -0.83
USP39-211ENST00000465282 DEFB105AQ8NG35 78 aa9.88□□□□□ -0.83
USP39-211ENST00000465282 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
USP39-211ENST00000465282 A0A1B0GX51 115 aa9.86□□□□□ -0.83
USP39-211ENST00000465282 K7ERJ3 54 aa9.86□□□□□ -0.83
USP39-211ENST00000465282 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
USP39-211ENST00000465282 MOBPQ13875 183 aa9.86□□□□□ -0.83
USP39-211ENST00000465282 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
USP39-211ENST00000465282 COX6CP09669 75 aa9.85□□□□□ -0.83
USP39-211ENST00000465282 Q6ZQY7 126 aa9.85□□□□□ -0.83
USP39-211ENST00000465282 Q8NBF4 154 aa9.85□□□□□ -0.83
USP39-211ENST00000465282 PPDPFLQ8WWR9 84 aa9.85□□□□□ -0.83
USP39-211ENST00000465282 TRIAP1O43715 76 aa9.84□□□□□ -0.83
USP39-211ENST00000465282 PSMB2P49721 201 aa9.84□□□□□ -0.83
USP39-211ENST00000465282 OCIAD2Q56VL3 154 aa9.84□□□□□ -0.83
USP39-211ENST00000465282 C9orf153Q5TBE3 101 aa9.84□□□□□ -0.83
USP39-211ENST00000465282 Q8N377 158 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms