RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 SERF1AO75920 110 aa12.61□□□□□ -0.39
USP42-205ENST00000465073 ZNF73O43830 326 aaPredicted RBP12.6□□□□□ -0.39
USP42-205ENST00000465073 TRGC2P03986 189 aa12.6□□□□□ -0.39
USP42-205ENST00000465073 C5orf52A6NGY3 159 aa12.59□□□□□ -0.39
USP42-205ENST00000465073 LINC00310P59036 64 aa12.59□□□□□ -0.39
USP42-205ENST00000465073 IGKCP01834 107 aa12.59□□□□□ -0.39
USP42-205ENST00000465073 PMCHL2Q9BQD1 86 aa12.59□□□□□ -0.39
USP42-205ENST00000465073 CBY1Q9Y3M2 126 aa12.58□□□□□ -0.4
USP42-205ENST00000465073 FABP4P15090 132 aa12.57□□□□□ -0.4
USP42-205ENST00000465073 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
USP42-205ENST00000465073 SOSTDC1Q6X4U4 206 aa12.57□□□□□ -0.4
USP42-205ENST00000465073 ST20-AS1Q8NBB2 130 aa12.57□□□□□ -0.4
USP42-205ENST00000465073 HINT1P49773 126 aaPredicted RBP12.56□□□□□ -0.4
USP42-205ENST00000465073 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
USP42-205ENST00000465073 ADAMTSL4-AS1Q5T5F5 129 aa12.55□□□□□ -0.4
USP42-205ENST00000465073 A0A0J9YXY3 114 aa12.54□□□□□ -0.4
USP42-205ENST00000465073 NPC2P61916 151 aa12.54□□□□□ -0.4
USP42-205ENST00000465073 E9PLD3 99 aa12.5□□□□□ -0.41
USP42-205ENST00000465073 SLC25A34Q6PIV7 304 aa12.5□□□□□ -0.41
USP42-205ENST00000465073 SPRR1BP22528 89 aa12.49□□□□□ -0.41
USP42-205ENST00000465073 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
USP42-205ENST00000465073 LCE2CQ5TA81 110 aa12.47□□□□□ -0.41
USP42-205ENST00000465073 DHRS4-AS1Q9P1J3 65 aa12.47□□□□□ -0.41
USP42-205ENST00000465073 OR13C6PQ8NH95 151 aa12.46□□□□□ -0.41
USP42-205ENST00000465073 SPANXCQ9NY87 97 aa12.46□□□□□ -0.41
USP42-205ENST00000465073 LINC00308Q8TCZ7 52 aa12.45□□□□□ -0.42
USP42-205ENST00000465073 LAMTOR3Q9UHA4 124 aa12.45□□□□□ -0.42
USP42-205ENST00000465073 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
USP42-205ENST00000465073 LITAFQ99732 161 aa12.44□□□□□ -0.42
USP42-205ENST00000465073 TIMM17BO60830 172 aa12.42□□□□□ -0.42
USP42-205ENST00000465073 PCOTHQ58A44 107 aa12.41□□□□□ -0.42
USP42-205ENST00000465073 SPANXDQ9BXN6 97 aa12.41□□□□□ -0.42
USP42-205ENST00000465073 KRTAP19-2Q3LHN2 52 aa12.39□□□□□ -0.43
USP42-205ENST00000465073 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
USP42-205ENST00000465073 SYS1-DBNDD2H3BUS1 97 aa12.38□□□□□ -0.43
USP42-205ENST00000465073 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
USP42-205ENST00000465073 CD164Q04900 197 aa12.38□□□□□ -0.43
USP42-205ENST00000465073 IGLV8-61A0A075B6I0 122 aa12.37□□□□□ -0.43
USP42-205ENST00000465073 COLCA2A8K830 154 aa12.37□□□□□ -0.43
USP42-205ENST00000465073 COX7BP24311 80 aa12.37□□□□□ -0.43
USP42-205ENST00000465073 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
USP42-205ENST00000465073 CRCT1Q9UGL9 99 aa12.36□□□□□ -0.43
USP42-205ENST00000465073 TAL2Q16559 108 aa12.35□□□□□ -0.43
USP42-205ENST00000465073 C6orf99Q4VX62 202 aa12.34□□□□□ -0.43
USP42-205ENST00000465073 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
USP42-205ENST00000465073 ZNF815PA8K554 130 aa12.34□□□□□ -0.43
USP42-205ENST00000465073 MT1HP80294 61 aa12.34□□□□□ -0.43
USP42-205ENST00000465073 FSIP2Q5CZC0 6907 aa12.33□□□□□ -0.44
USP42-205ENST00000465073 Q1RN00 199 aa12.33□□□□□ -0.44
USP42-205ENST00000465073 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
USP42-205ENST00000465073 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
USP42-205ENST00000465073 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
USP42-205ENST00000465073 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
USP42-205ENST00000465073 H7C2G1 150 aa12.3□□□□□ -0.44
USP42-205ENST00000465073 Q5XG85 94 aa12.3□□□□□ -0.44
USP42-205ENST00000465073 TRBV7-6A0A0J9YX20 115 aa12.29□□□□□ -0.44
USP42-205ENST00000465073 PET117Q6UWS5 81 aa12.28□□□□□ -0.44
USP42-205ENST00000465073 AKR1D1P51857 326 aa12.27□□□□□ -0.44
USP42-205ENST00000465073 TTTY13Q9BZ97 58 aa12.27□□□□□ -0.45
USP42-205ENST00000465073 SMIM29Q86T20 159 aa12.25□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BKO60814 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BJP06899 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BOP23527 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BBP33778 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BDP58876 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BCP62807 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST2H2BEQ16778 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.24□□□□□ -0.45
USP42-205ENST00000465073 C1orf195Q5TG92 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BHQ93079 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BNQ99877 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 HIST1H2BMQ99879 126 aa12.24□□□□□ -0.45
USP42-205ENST00000465073 A0A1B0GWB2 263 aa12.23□□□□□ -0.45
USP42-205ENST00000465073 IGLV5-48A0A075B6I7 105 aa12.22□□□□□ -0.45
USP42-205ENST00000465073 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
USP42-205ENST00000465073 SLC7A5P1Q8MH63 180 aa12.21□□□□□ -0.45
USP42-205ENST00000465073 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.46
USP42-205ENST00000465073 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
USP42-205ENST00000465073 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
USP42-205ENST00000465073 A6NDN8 102 aa12.18□□□□□ -0.46
USP42-205ENST00000465073 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
USP42-205ENST00000465073 IFITM1P13164 125 aa12.18□□□□□ -0.46
USP42-205ENST00000465073 LORP23490 312 aaPredicted RBP12.17□□□□□ -0.46
USP42-205ENST00000465073 RPL37P61927 97 aaKnown RBP12.17□□□□□ -0.46
USP42-205ENST00000465073 A0A0G2JQZ4 141 aa12.16□□□□□ -0.46
USP42-205ENST00000465073 A4D1N5 150 aa12.16□□□□□ -0.46
USP42-205ENST00000465073 KRTAP10-6P60371 365 aaPredicted RBP12.15□□□□□ -0.46
USP42-205ENST00000465073 Q6ZVH6 145 aa12.15□□□□□ -0.46
USP42-205ENST00000465073 KRTDAPP60985 99 aa12.13□□□□□ -0.47
USP42-205ENST00000465073 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
USP42-205ENST00000465073 TCL1BO95988 128 aa12.12□□□□□ -0.47
USP42-205ENST00000465073 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
USP42-205ENST00000465073 M0R2T5 61 aa12.1□□□□□ -0.47
USP42-205ENST00000465073 ANKRD39Q53RE8 183 aa12.09□□□□□ -0.47
USP42-205ENST00000465073 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
USP42-205ENST00000465073 TRAV13-2A0A0B4J235 113 aa12.08□□□□□ -0.47
USP42-205ENST00000465073 C20orf202A1L168 122 aa12.08□□□□□ -0.47
USP42-205ENST00000465073 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
USP42-205ENST00000465073 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
USP42-205ENST00000465073 F8WEM9 126 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms