RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 LINC00158P58513 81 aa4.72□□□□□ -1.65
APP-213ENST00000464867 JOSD1Q15040 202 aaPredicted RBP4.72□□□□□ -1.65
APP-213ENST00000464867 SFTA2Q6UW10 78 aa4.72□□□□□ -1.65
APP-213ENST00000464867 LAMTOR2Q9Y2Q5 125 aa4.72□□□□□ -1.65
APP-213ENST00000464867 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
APP-213ENST00000464867 FAM236DA0A1B0GTK5 79 aa4.71□□□□□ -1.66
APP-213ENST00000464867 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
APP-213ENST00000464867 SMLR1H3BR10 107 aa4.71□□□□□ -1.66
APP-213ENST00000464867 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
APP-213ENST00000464867 FAM236CP0DP71 79 aa4.71□□□□□ -1.66
APP-213ENST00000464867 RPL23P62829 140 aaKnown RBP4.71□□□□□ -1.66
APP-213ENST00000464867 CD164Q04900 197 aa4.71□□□□□ -1.66
APP-213ENST00000464867 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
APP-213ENST00000464867 C10orf91Q5T1B1 145 aa4.71□□□□□ -1.66
APP-213ENST00000464867 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
APP-213ENST00000464867 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
APP-213ENST00000464867 BOD1L2Q8IYS8 172 aa4.71□□□□□ -1.66
APP-213ENST00000464867 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
APP-213ENST00000464867 Q9BRP9 147 aa4.71□□□□□ -1.66
APP-213ENST00000464867 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
APP-213ENST00000464867 TRBV10-3A0A0K0K1G6 114 aa4.7□□□□□ -1.66
APP-213ENST00000464867 H7C2G1 150 aa4.7□□□□□ -1.66
APP-213ENST00000464867 PMVKQ15126 192 aa4.7□□□□□ -1.66
APP-213ENST00000464867 Q6ZRX8 168 aa4.7□□□□□ -1.66
APP-213ENST00000464867 ERASQ7Z444 233 aa4.7□□□□□ -1.66
APP-213ENST00000464867 SCGB3A1Q96QR1 104 aa4.7□□□□□ -1.66
APP-213ENST00000464867 C5orf52A6NGY3 159 aa4.68□□□□□ -1.66
APP-213ENST00000464867 Q5XG85 94 aa4.68□□□□□ -1.66
APP-213ENST00000464867 ALKAL2Q6UX46 152 aa4.68□□□□□ -1.66
APP-213ENST00000464867 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
APP-213ENST00000464867 LAMTOR3Q9UHA4 124 aa4.68□□□□□ -1.66
APP-213ENST00000464867 A0A0U1RRA0 63 aa4.67□□□□□ -1.66
APP-213ENST00000464867 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
APP-213ENST00000464867 PRO1933Q9H354 126 aa4.67□□□□□ -1.66
APP-213ENST00000464867 CST9LQ9H4G1 147 aa4.67□□□□□ -1.66
APP-213ENST00000464867 NXT2Q9NPJ8 142 aaKnown RBP4.67□□□□□ -1.66
APP-213ENST00000464867 A0A1B0GXF2 115 aa4.66□□□□□ -1.66
APP-213ENST00000464867 ST20-AS1Q8NBB2 130 aa4.66□□□□□ -1.66
APP-213ENST00000464867 A4D1N5 150 aa4.65□□□□□ -1.67
APP-213ENST00000464867 DDTP30046 118 aa4.65□□□□□ -1.67
APP-213ENST00000464867 BATF3Q9NR55 127 aa4.65□□□□□ -1.67
APP-213ENST00000464867 LINC01549A6NIU2 74 aa4.64□□□□□ -1.67
APP-213ENST00000464867 ADIRFQ15847 76 aa4.64□□□□□ -1.67
APP-213ENST00000464867 TCL1BO95988 128 aa4.63□□□□□ -1.67
APP-213ENST00000464867 ADCYAP1P18509 176 aa4.63□□□□□ -1.67
APP-213ENST00000464867 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
APP-213ENST00000464867 PCP2Q8IVA1 136 aa4.63□□□□□ -1.67
APP-213ENST00000464867 SPRR1BP22528 89 aa4.62□□□□□ -1.67
APP-213ENST00000464867 HINT1P49773 126 aaPredicted RBP4.62□□□□□ -1.67
APP-213ENST00000464867 AKR1D1P51857 326 aa4.62□□□□□ -1.67
APP-213ENST00000464867 Q1RN00 199 aa4.62□□□□□ -1.67
APP-213ENST00000464867 FA2HQ7L5A8 372 aa4.62□□□□□ -1.67
APP-213ENST00000464867 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
APP-213ENST00000464867 SMIM13P0DJ93 91 aa4.61□□□□□ -1.67
APP-213ENST00000464867 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
APP-213ENST00000464867 S100A7L2Q5SY68 101 aa4.61□□□□□ -1.67
APP-213ENST00000464867 RBM12B-AS1Q9P1G2 102 aa4.61□□□□□ -1.67
APP-213ENST00000464867 KMT2DO14686 5537 aa4.6□□□□□ -1.67
APP-213ENST00000464867 IGLC3P0DOY3 106 aa4.6□□□□□ -1.67
APP-213ENST00000464867 NDUFA6P56556 154 aa4.6□□□□□ -1.67
APP-213ENST00000464867 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
APP-213ENST00000464867 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
APP-213ENST00000464867 TRBV10-2A0A0K0K1G8 114 aa4.59□□□□□ -1.67
APP-213ENST00000464867 LINC00587B1AMM8 73 aa4.59□□□□□ -1.67
APP-213ENST00000464867 ZNF22P17026 224 aaPredicted RBP4.59□□□□□ -1.67
APP-213ENST00000464867 Q6ZVH6 145 aa4.59□□□□□ -1.67
APP-213ENST00000464867 NAT8Q9UHE5 227 aa4.59□□□□□ -1.67
APP-213ENST00000464867 TRAV23DV6A0A075B6W5 121 aa4.58□□□□□ -1.68
APP-213ENST00000464867 SRP19P09132 144 aaKnown RBP4.58□□□□□ -1.68
APP-213ENST00000464867 SLC51BQ86UW2 128 aa4.58□□□□□ -1.68
APP-213ENST00000464867 MAP1LC3CQ9BXW4 147 aa4.58□□□□□ -1.68
APP-213ENST00000464867 LOC107984156A0A0G2JMH3 177 aa4.57□□□□□ -1.68
APP-213ENST00000464867 ZNF73O43830 326 aaPredicted RBP4.57□□□□□ -1.68
APP-213ENST00000464867 TAL2Q16559 108 aa4.57□□□□□ -1.68
APP-213ENST00000464867 TMEM170BQ5T4T1 132 aa4.57□□□□□ -1.68
APP-213ENST00000464867 ARL17AQ8IVW1 177 aa4.57□□□□□ -1.68
APP-213ENST00000464867 Q96NJ1 140 aa4.57□□□□□ -1.68
APP-213ENST00000464867 A0A0G2JQZ4 141 aa4.56□□□□□ -1.68
APP-213ENST00000464867 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
APP-213ENST00000464867 DHRS4-AS1Q9P1J3 65 aa4.56□□□□□ -1.68
APP-213ENST00000464867 CBY1Q9Y3M2 126 aa4.56□□□□□ -1.68
APP-213ENST00000464867 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
APP-213ENST00000464867 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
APP-213ENST00000464867 SPANXB1Q9NS25 103 aaPredicted RBP4.55□□□□□ -1.68
APP-213ENST00000464867 A6NN06 94 aa4.54□□□□□ -1.68
APP-213ENST00000464867 HERV-K104P63124 156 aa4.54□□□□□ -1.68
APP-213ENST00000464867 A8MWP4 228 aa4.53□□□□□ -1.68
APP-213ENST00000464867 COMMD7Q86VX2 200 aa4.53□□□□□ -1.68
APP-213ENST00000464867 MIEN1Q9BRT3 115 aa4.53□□□□□ -1.68
APP-213ENST00000464867 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
APP-213ENST00000464867 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
APP-213ENST00000464867 MTURNQ8N3F0 131 aa4.52□□□□□ -1.69
APP-213ENST00000464867 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
APP-213ENST00000464867 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
APP-213ENST00000464867 S100A6P06703 90 aa4.5□□□□□ -1.69
APP-213ENST00000464867 SMCO4Q9NRQ5 59 aa4.5□□□□□ -1.69
APP-213ENST00000464867 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
APP-213ENST00000464867 MYMXA0A1B0GTQ4 84 aa4.48□□□□□ -1.69
APP-213ENST00000464867 A8MUU9 505 aa4.48□□□□□ -1.69
APP-213ENST00000464867 NDUFC2O95298 119 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms