RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PPDPFQ9H3Y8 114 aa7.52□□□□□ -1.21
XRN1-203ENST00000463916 S100A12P80511 92 aa7.51□□□□□ -1.21
XRN1-203ENST00000463916 TRAV23DV6A0A075B6W5 121 aa7.5□□□□□ -1.21
XRN1-203ENST00000463916 Q6ZRX8 168 aa7.5□□□□□ -1.21
XRN1-203ENST00000463916 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
XRN1-203ENST00000463916 C20orf202A1L168 122 aa7.5□□□□□ -1.21
XRN1-203ENST00000463916 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
XRN1-203ENST00000463916 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
XRN1-203ENST00000463916 HIST1H2BLQ99880 126 aa7.49□□□□□ -1.21
XRN1-203ENST00000463916 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
XRN1-203ENST00000463916 ZNF73O43830 326 aaPredicted RBP7.48□□□□□ -1.21
XRN1-203ENST00000463916 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
XRN1-203ENST00000463916 LINC00483Q53H64 154 aa7.48□□□□□ -1.21
XRN1-203ENST00000463916 GAGE2AQ6NT46 116 aa7.48□□□□□ -1.21
XRN1-203ENST00000463916 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
XRN1-203ENST00000463916 OR13C6PQ8NH95 151 aa7.47□□□□□ -1.21
XRN1-203ENST00000463916 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
XRN1-203ENST00000463916 MUC2Q02817 5179 aa7.44□□□□□ -1.22
XRN1-203ENST00000463916 S100A2P29034 98 aa7.44□□□□□ -1.22
XRN1-203ENST00000463916 Q8NBF4 154 aa7.44□□□□□ -1.22
XRN1-203ENST00000463916 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
XRN1-203ENST00000463916 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
XRN1-203ENST00000463916 LINC00518Q8N0U6 118 aa7.42□□□□□ -1.22
XRN1-203ENST00000463916 IGLV9-49A0A0B4J1Y8 123 aa7.42□□□□□ -1.22
XRN1-203ENST00000463916 S100A6P06703 90 aa7.42□□□□□ -1.22
XRN1-203ENST00000463916 AKR1D1P51857 326 aa7.42□□□□□ -1.22
XRN1-203ENST00000463916 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
XRN1-203ENST00000463916 MUSTN1Q8IVN3 82 aa7.42□□□□□ -1.22
XRN1-203ENST00000463916 CTAG1AP78358 180 aa7.41□□□□□ -1.22
XRN1-203ENST00000463916 MOBPQ13875 183 aa7.41□□□□□ -1.22
XRN1-203ENST00000463916 SPAG11AQ6PDA7 123 aa7.41□□□□□ -1.22
XRN1-203ENST00000463916 HINT1P49773 126 aaPredicted RBP7.4□□□□□ -1.22
XRN1-203ENST00000463916 IFITM1P13164 125 aa7.4□□□□□ -1.23
XRN1-203ENST00000463916 C6orf99Q4VX62 202 aa7.4□□□□□ -1.23
XRN1-203ENST00000463916 CBY1Q9Y3M2 126 aa7.4□□□□□ -1.23
XRN1-203ENST00000463916 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
XRN1-203ENST00000463916 Q6ZVH6 145 aa7.39□□□□□ -1.23
XRN1-203ENST00000463916 ELOF1P60002 83 aaKnown RBP7.38□□□□□ -1.23
XRN1-203ENST00000463916 IGLV7-46A0A075B6I9 117 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 A6NDN8 102 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 COX7BP24311 80 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
XRN1-203ENST00000463916 SPINK1P00995 79 aa7.36□□□□□ -1.23
XRN1-203ENST00000463916 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
XRN1-203ENST00000463916 HSBP1L1C9JCN9 74 aa7.35□□□□□ -1.23
XRN1-203ENST00000463916 SCGB1D1O95968 90 aa7.35□□□□□ -1.23
XRN1-203ENST00000463916 SPRR1BP22528 89 aa7.34□□□□□ -1.23
XRN1-203ENST00000463916 TPRXLQ17RH7 258 aa7.34□□□□□ -1.23
XRN1-203ENST00000463916 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
XRN1-203ENST00000463916 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
XRN1-203ENST00000463916 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
XRN1-203ENST00000463916 Q8N377 158 aa7.32□□□□□ -1.24
XRN1-203ENST00000463916 DEFB105AQ8NG35 78 aa7.31□□□□□ -1.24
XRN1-203ENST00000463916 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
XRN1-203ENST00000463916 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
XRN1-203ENST00000463916 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
XRN1-203ENST00000463916 A4D1N5 150 aa7.31□□□□□ -1.24
XRN1-203ENST00000463916 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
XRN1-203ENST00000463916 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
XRN1-203ENST00000463916 LINC01547P58512 204 aaPredicted RBP7.29□□□□□ -1.24
XRN1-203ENST00000463916 TAL2Q16559 108 aa7.29□□□□□ -1.24
XRN1-203ENST00000463916 Q1RN00 199 aa7.29□□□□□ -1.24
XRN1-203ENST00000463916 COX8AP10176 69 aa7.28□□□□□ -1.24
XRN1-203ENST00000463916 SMIM29Q86T20 159 aa7.28□□□□□ -1.24
XRN1-203ENST00000463916 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
XRN1-203ENST00000463916 LAMTOR3Q9UHA4 124 aa7.28□□□□□ -1.24
XRN1-203ENST00000463916 TEX49A0A1B0GTD5 131 aa7.27□□□□□ -1.25
XRN1-203ENST00000463916 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
XRN1-203ENST00000463916 IGLV5-48A0A075B6I7 105 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 C14orf144Q96I85 54 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 SLC25A20O43772 301 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 C12orf57Q99622 126 aa7.26□□□□□ -1.25
XRN1-203ENST00000463916 PAM16Q9Y3D7 125 aa7.25□□□□□ -1.25
XRN1-203ENST00000463916 DLEU1O43261 78 aa7.24□□□□□ -1.25
XRN1-203ENST00000463916 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
XRN1-203ENST00000463916 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
XRN1-203ENST00000463916 SPATA45Q537H7 98 aa7.23□□□□□ -1.25
XRN1-203ENST00000463916 LINC00575Q6W349 94 aa7.23□□□□□ -1.25
XRN1-203ENST00000463916 VAMP3Q15836 100 aa7.21□□□□□ -1.26
XRN1-203ENST00000463916 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
XRN1-203ENST00000463916 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
XRN1-203ENST00000463916 C2orf91Q6ZV80 131 aa7.2□□□□□ -1.26
XRN1-203ENST00000463916 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
XRN1-203ENST00000463916 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
XRN1-203ENST00000463916 CFC1P0CG37 223 aa7.2□□□□□ -1.26
XRN1-203ENST00000463916 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
XRN1-203ENST00000463916 H7C2G1 150 aa7.19□□□□□ -1.26
XRN1-203ENST00000463916 HIGD1BQ9P298 99 aa7.19□□□□□ -1.26
XRN1-203ENST00000463916 hADV29S1A0JD25 119 aa7.18□□□□□ -1.26
XRN1-203ENST00000463916 Q6ZQY7 126 aa7.18□□□□□ -1.26
XRN1-203ENST00000463916 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
XRN1-203ENST00000463916 CD164Q04900 197 aa7.18□□□□□ -1.26
XRN1-203ENST00000463916 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
XRN1-203ENST00000463916 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
XRN1-203ENST00000463916 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.26
XRN1-203ENST00000463916 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms