RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
PTPRD-207ENST00000463477 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 CCKP06307 115 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 VPREB1P12018 145 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 TRAV23DV6A0A075B6W5 121 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 GHRHP01286 108 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 Q6JHZ5 121 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 Q6ZRU5 148 aa6.49□□□□□ -1.37
PTPRD-207ENST00000463477 TRBV10-3A0A0K0K1G6 114 aa6.48□□□□□ -1.37
PTPRD-207ENST00000463477 M0R378 163 aa6.48□□□□□ -1.37
PTPRD-207ENST00000463477 DIRC1Q969H9 104 aa6.48□□□□□ -1.37
PTPRD-207ENST00000463477 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
PTPRD-207ENST00000463477 A0A1B0GVY2 172 aa6.47□□□□□ -1.37
PTPRD-207ENST00000463477 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
PTPRD-207ENST00000463477 BIRC6Q9NR09 4857 aa6.47□□□□□ -1.37
PTPRD-207ENST00000463477 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.37
PTPRD-207ENST00000463477 ELOF1P60002 83 aaKnown RBP6.46□□□□□ -1.37
PTPRD-207ENST00000463477 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.46□□□□□ -1.37
PTPRD-207ENST00000463477 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.37
PTPRD-207ENST00000463477 LINC00846Q9NV44 126 aa6.46□□□□□ -1.37
PTPRD-207ENST00000463477 PKD1P98161 4303 aa6.46□□□□□ -1.38
PTPRD-207ENST00000463477 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-207ENST00000463477 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 PDE6GP18545 87 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 COX7BP24311 80 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
PTPRD-207ENST00000463477 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
PTPRD-207ENST00000463477 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
PTPRD-207ENST00000463477 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
PTPRD-207ENST00000463477 TNP2Q05952 138 aa6.44□□□□□ -1.38
PTPRD-207ENST00000463477 RBM3P98179 157 aaKnown RBP6.43□□□□□ -1.38
PTPRD-207ENST00000463477 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-207ENST00000463477 RMI2Q96E14 147 aa6.43□□□□□ -1.38
PTPRD-207ENST00000463477 PKHD1P08F94 4074 aa6.43□□□□□ -1.38
PTPRD-207ENST00000463477 Q6ZQT0 140 aa6.42□□□□□ -1.38
PTPRD-207ENST00000463477 Q6ZRP5 223 aa6.42□□□□□ -1.38
PTPRD-207ENST00000463477 Q6ZQY7 126 aa6.42□□□□□ -1.38
PTPRD-207ENST00000463477 LINC00528Q8N1L1 170 aa6.42□□□□□ -1.38
PTPRD-207ENST00000463477 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
PTPRD-207ENST00000463477 IGLV5-37A0A075B6J1 123 aa6.41□□□□□ -1.38
PTPRD-207ENST00000463477 KCNQ1DNQ9H478 68 aa6.4□□□□□ -1.38
PTPRD-207ENST00000463477 LAMTOR3Q9UHA4 124 aa6.4□□□□□ -1.38
PTPRD-207ENST00000463477 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
PTPRD-207ENST00000463477 ATOX1O00244 68 aa6.39□□□□□ -1.39
PTPRD-207ENST00000463477 DSCR8Q96T75 97 aa6.39□□□□□ -1.39
PTPRD-207ENST00000463477 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
PTPRD-207ENST00000463477 DYNC1H1Q14204 4646 aaKnown RBP6.39□□□□□ -1.39
PTPRD-207ENST00000463477 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
PTPRD-207ENST00000463477 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
PTPRD-207ENST00000463477 NKAPP1Q8N9T2 125 aa6.38□□□□□ -1.39
PTPRD-207ENST00000463477 IGKV3D-7A0A0C4DH55 119 aa6.37□□□□□ -1.39
PTPRD-207ENST00000463477 UQCRQO14949 82 aa6.37□□□□□ -1.39
PTPRD-207ENST00000463477 B5MCH6 92 aa6.36□□□□□ -1.39
PTPRD-207ENST00000463477 A0A087WTM6 91 aa6.36□□□□□ -1.39
PTPRD-207ENST00000463477 PRYO14603 147 aa6.36□□□□□ -1.39
PTPRD-207ENST00000463477 C3orf22Q8N5N4 141 aa6.36□□□□□ -1.39
PTPRD-207ENST00000463477 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
PTPRD-207ENST00000463477 COX7CP15954 63 aa6.35□□□□□ -1.39
PTPRD-207ENST00000463477 SPRR1AP35321 89 aa6.35□□□□□ -1.39
PTPRD-207ENST00000463477 SERTAD4-AS1Q5TG53 156 aa6.35□□□□□ -1.39
PTPRD-207ENST00000463477 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
PTPRD-207ENST00000463477 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
PTPRD-207ENST00000463477 LRCOL1A6NCL2 159 aa6.34□□□□□ -1.39
PTPRD-207ENST00000463477 KRTAP4-16G5E9R7 235 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-207ENST00000463477 PSCAO43653 123 aa6.34□□□□□ -1.39
PTPRD-207ENST00000463477 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
PTPRD-207ENST00000463477 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
PTPRD-207ENST00000463477 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
PTPRD-207ENST00000463477 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
PTPRD-207ENST00000463477 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
PTPRD-207ENST00000463477 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
PTPRD-207ENST00000463477 LCE2BO14633 110 aa6.32□□□□□ -1.4
PTPRD-207ENST00000463477 BCE1O60756 84 aa6.32□□□□□ -1.4
PTPRD-207ENST00000463477 CXCL6P80162 114 aa6.32□□□□□ -1.4
PTPRD-207ENST00000463477 Q6ZVQ6 151 aa6.32□□□□□ -1.4
PTPRD-207ENST00000463477 Q6ZRX8 168 aa6.31□□□□□ -1.4
PTPRD-207ENST00000463477 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
PTPRD-207ENST00000463477 A0A1B0GW54 56 aa6.3□□□□□ -1.4
PTPRD-207ENST00000463477 CRYGAP11844 174 aa6.3□□□□□ -1.4
PTPRD-207ENST00000463477 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
PTPRD-207ENST00000463477 A0A087WVE0 104 aa6.3□□□□□ -1.4
PTPRD-207ENST00000463477 LINC01547P58512 204 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-207ENST00000463477 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
PTPRD-207ENST00000463477 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
PTPRD-207ENST00000463477 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
PTPRD-207ENST00000463477 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
PTPRD-207ENST00000463477 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
PTPRD-207ENST00000463477 HERC2O95714 4834 aa6.28□□□□□ -1.4
PTPRD-207ENST00000463477 ETDCA0A1B0GVM5 59 aa6.28□□□□□ -1.4
PTPRD-207ENST00000463477 CDK2AP2O75956 126 aa6.28□□□□□ -1.4
PTPRD-207ENST00000463477 Q8N377 158 aa6.28□□□□□ -1.4
PTPRD-207ENST00000463477 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
PTPRD-207ENST00000463477 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
PTPRD-207ENST00000463477 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
PTPRD-207ENST00000463477 RYR1P21817 5038 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms