RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 LINC00959A0A1B0GUT2 108 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 CLPSL2Q6UWE3 100 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 CD164L2Q6UWJ8 174 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 LINC01561Q8N1V8 128 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 Q8N3U1 123 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 CHCHD10Q8WYQ3 142 aaPredicted RBP5.15□□□□□ -1.59
USP4-207ENST00000462673 UBL5Q9BZL1 73 aa5.15□□□□□ -1.59
USP4-207ENST00000462673 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 VPS13DQ5THJ4 4388 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 IGLV10-54A0A075B6I4 117 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 Q8IZM0 81 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 Q8N814 137 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 DSCR8Q96T75 97 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 PKIGQ9Y2B9 76 aa5.14□□□□□ -1.59
USP4-207ENST00000462673 IGHV3OR16-9A0A0B4J2B5 98 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 LRCOL1A6NCL2 159 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 H3BQ85 93 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 TMEM256-PLSCR3K7ERE1 68 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 XCL1P47992 114 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 C9orf129Q5T035 196 aaKnown RBP5.13□□□□□ -1.59
USP4-207ENST00000462673 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
USP4-207ENST00000462673 SACSQ9NZJ4 4579 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 IGLV5-52A0A0A0MRZ9 124 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 C16orf90A8MZG2 172 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 ZNF561-AS1K7EIQ3 104 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 PFN2P35080 140 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 ATP5EP56381 51 aaPredicted RBP5.12□□□□□ -1.59
USP4-207ENST00000462673 KMT2AQ03164 3969 aa5.12□□□□□ -1.59
USP4-207ENST00000462673 DNAH1Q9P2D7 4330 aa5.11□□□□□ -1.59
USP4-207ENST00000462673 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
USP4-207ENST00000462673 F8WDY8 70 aa5.11□□□□□ -1.59
USP4-207ENST00000462673 SERP1Q9Y6X1 66 aa5.11□□□□□ -1.59
USP4-207ENST00000462673 HYDINQ4G0P3 5121 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 TRAV23DV6A0A075B6W5 121 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 LOC110117498A0A087WWA1 95 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 OXTP01178 125 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 SLPIP03973 132 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 COX17Q14061 63 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 C6orf226Q5I0X4 101 aa5.1□□□□□ -1.59
USP4-207ENST00000462673 RYR3Q15413 4870 aa5.09□□□□□ -1.59
USP4-207ENST00000462673 PDE6GP18545 87 aa5.09□□□□□ -1.59
USP4-207ENST00000462673 Q5XG85 94 aa5.09□□□□□ -1.59
USP4-207ENST00000462673 KRTAP26-1Q6PEX3 210 aa5.09□□□□□ -1.59
USP4-207ENST00000462673 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
USP4-207ENST00000462673 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.08□□□□□ -1.6
USP4-207ENST00000462673 GVQW2A0A096LPI5 108 aaPredicted RBP5.08□□□□□ -1.6
USP4-207ENST00000462673 Q6ZQT0 140 aa5.08□□□□□ -1.6
USP4-207ENST00000462673 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 NDUFC1O43677 76 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
USP4-207ENST00000462673 CNBPP62633 177 aaKnown RBP5.07□□□□□ -1.6
USP4-207ENST00000462673 CXCL6P80162 114 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 KLKP1Q107X0 134 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 LINC00474Q9P2X8 69 aa5.07□□□□□ -1.6
USP4-207ENST00000462673 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
USP4-207ENST00000462673 RBM3P98179 157 aaKnown RBP5.06□□□□□ -1.6
USP4-207ENST00000462673 HRCT1Q6UXD1 115 aa5.06□□□□□ -1.6
USP4-207ENST00000462673 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
USP4-207ENST00000462673 CAMK2N2Q96S95 79 aa5.06□□□□□ -1.6
USP4-207ENST00000462673 RYR2Q92736 4967 aa5.06□□□□□ -1.6
USP4-207ENST00000462673 SYCNQ0VAF6 134 aa5.05□□□□□ -1.6
USP4-207ENST00000462673 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
USP4-207ENST00000462673 C6orf99Q4VX62 202 aa5.05□□□□□ -1.6
USP4-207ENST00000462673 LINC00575Q6W349 94 aa5.05□□□□□ -1.6
USP4-207ENST00000462673 H7BZZ5 65 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 SPAG11BQ08648 103 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 HIGD2BQ4VC39 106 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 Q6ZVQ6 151 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 LAMTOR3Q9UHA4 124 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
USP4-207ENST00000462673 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
USP4-207ENST00000462673 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
USP4-207ENST00000462673 LINC01547P58512 204 aaPredicted RBP5.03□□□□□ -1.6
USP4-207ENST00000462673 C15orf56Q8N910 161 aa5.03□□□□□ -1.6
USP4-207ENST00000462673 ERC2-IT1O76042 136 aa5.02□□□□□ -1.61
USP4-207ENST00000462673 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
USP4-207ENST00000462673 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
USP4-207ENST00000462673 F8WEM9 126 aa5.01□□□□□ -1.61
USP4-207ENST00000462673 HAMPP81172 84 aa5.01□□□□□ -1.61
USP4-207ENST00000462673 KIAA0087Q14695 138 aa5.01□□□□□ -1.61
USP4-207ENST00000462673 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.01□□□□□ -1.61
USP4-207ENST00000462673 FAM229AH3BQW9 127 aa5□□□□□ -1.61
USP4-207ENST00000462673 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 IGLV6-57P01721 117 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 KRTAP10-1P60331 282 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 NREPQ16612 68 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 Q6ZQY7 126 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 Q6ZRU5 148 aa4.99□□□□□ -1.61
USP4-207ENST00000462673 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
USP4-207ENST00000462673 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
USP4-207ENST00000462673 COX7BP24311 80 aa4.98□□□□□ -1.61
USP4-207ENST00000462673 FUSP35637 526 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP4-207ENST00000462673 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
USP4-207ENST00000462673 PRR3P79522 188 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms