RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 IGLV6-57P01721 117 aa5.88□□□□□ -1.47
SF3A3-204ENST00000462258 ADAMTSL4-AS1Q5T5F5 129 aa5.88□□□□□ -1.47
SF3A3-204ENST00000462258 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
SF3A3-204ENST00000462258 MUC2Q02817 5179 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-204ENST00000462258 C3orf79P0CE67 100 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 CTAG1AP78358 180 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 Q6ZRX8 168 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
SF3A3-204ENST00000462258 ZNF815PA8K554 130 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 KRTDAPP60985 99 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 COA6Q5JTJ3 125 aaKnown RBP5.86□□□□□ -1.47
SF3A3-204ENST00000462258 SPAG11AQ6PDA7 123 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 LITAFQ99732 161 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 Q9BRP9 147 aa5.86□□□□□ -1.47
SF3A3-204ENST00000462258 TMEM238LA0A1B0GVL6 79 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 TIMM17BO60830 172 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 ERC2-IT1O76042 136 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 Q8NBF4 154 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 LINC00308Q8TCZ7 52 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 SPANXCQ9NY87 97 aa5.85□□□□□ -1.47
SF3A3-204ENST00000462258 C20orf202A1L168 122 aa5.84□□□□□ -1.47
SF3A3-204ENST00000462258 ZNF73O43830 326 aaPredicted RBP5.84□□□□□ -1.47
SF3A3-204ENST00000462258 IGLV9-49A0A0B4J1Y8 123 aa5.83□□□□□ -1.48
SF3A3-204ENST00000462258 MOBPQ13875 183 aa5.83□□□□□ -1.48
SF3A3-204ENST00000462258 JOSD1Q15040 202 aaPredicted RBP5.83□□□□□ -1.48
SF3A3-204ENST00000462258 CBY1Q9Y3M2 126 aa5.83□□□□□ -1.48
SF3A3-204ENST00000462258 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
SF3A3-204ENST00000462258 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
SF3A3-204ENST00000462258 OR13C6PQ8NH95 151 aa5.82□□□□□ -1.48
SF3A3-204ENST00000462258 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
SF3A3-204ENST00000462258 SCGB1D4Q6XE38 83 aa5.81□□□□□ -1.48
SF3A3-204ENST00000462258 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
SF3A3-204ENST00000462258 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
SF3A3-204ENST00000462258 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-204ENST00000462258 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
SF3A3-204ENST00000462258 SPINK1P00995 79 aa5.79□□□□□ -1.48
SF3A3-204ENST00000462258 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
SF3A3-204ENST00000462258 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
SF3A3-204ENST00000462258 ST20-AS1Q8NBB2 130 aa5.79□□□□□ -1.48
SF3A3-204ENST00000462258 AKR1D1P51857 326 aa5.78□□□□□ -1.48
SF3A3-204ENST00000462258 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
SF3A3-204ENST00000462258 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
SF3A3-204ENST00000462258 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
SF3A3-204ENST00000462258 LINC00518Q8N0U6 118 aa5.77□□□□□ -1.49
SF3A3-204ENST00000462258 COPS9Q8WXC6 57 aa5.77□□□□□ -1.49
SF3A3-204ENST00000462258 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
SF3A3-204ENST00000462258 C6orf99Q4VX62 202 aa5.76□□□□□ -1.49
SF3A3-204ENST00000462258 PCP2Q8IVA1 136 aa5.76□□□□□ -1.49
SF3A3-204ENST00000462258 DHRS4-AS1Q9P1J3 65 aa5.76□□□□□ -1.49
SF3A3-204ENST00000462258 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 IFITM1P13164 125 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 COX7BP24311 80 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 Q6ZVH6 145 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 HIST3H2BBQ8N257 126 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
SF3A3-204ENST00000462258 SPRR1BP22528 89 aa5.74□□□□□ -1.49
SF3A3-204ENST00000462258 S100A2P29034 98 aa5.74□□□□□ -1.49
SF3A3-204ENST00000462258 Q8N377 158 aa5.74□□□□□ -1.49
SF3A3-204ENST00000462258 HIST1H2BLQ99880 126 aa5.74□□□□□ -1.49
SF3A3-204ENST00000462258 A6NDN8 102 aa5.73□□□□□ -1.49
SF3A3-204ENST00000462258 S100A1P23297 94 aa5.73□□□□□ -1.49
SF3A3-204ENST00000462258 SNRPEP62304 92 aaKnown RBP5.73□□□□□ -1.49
SF3A3-204ENST00000462258 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
SF3A3-204ENST00000462258 SLC25A34Q6PIV7 304 aa5.73□□□□□ -1.49
SF3A3-204ENST00000462258 SLC25A20O43772 301 aa5.72□□□□□ -1.49
SF3A3-204ENST00000462258 MUSTN1Q8IVN3 82 aa5.72□□□□□ -1.49
SF3A3-204ENST00000462258 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
SF3A3-204ENST00000462258 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
SF3A3-204ENST00000462258 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
SF3A3-204ENST00000462258 S100A6P06703 90 aa5.71□□□□□ -1.5
SF3A3-204ENST00000462258 LAMTOR3Q9UHA4 124 aa5.71□□□□□ -1.5
SF3A3-204ENST00000462258 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
SF3A3-204ENST00000462258 TAL2Q16559 108 aa5.69□□□□□ -1.5
SF3A3-204ENST00000462258 Q1RN00 199 aa5.69□□□□□ -1.5
SF3A3-204ENST00000462258 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
SF3A3-204ENST00000462258 LIMD2Q9BT23 127 aa5.69□□□□□ -1.5
SF3A3-204ENST00000462258 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
SF3A3-204ENST00000462258 HRCT1Q6UXD1 115 aa5.68□□□□□ -1.5
SF3A3-204ENST00000462258 A4D1N5 150 aa5.67□□□□□ -1.5
SF3A3-204ENST00000462258 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
SF3A3-204ENST00000462258 NHP2Q9NX24 153 aaKnown RBP5.67□□□□□ -1.5
SF3A3-204ENST00000462258 IGLV5-48A0A075B6I7 105 aa5.66□□□□□ -1.5
SF3A3-204ENST00000462258 LINC01547P58512 204 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-204ENST00000462258 ASB16-AS1Q495Z4 193 aa5.65□□□□□ -1.5
SF3A3-204ENST00000462258 SMIM29Q86T20 159 aa5.65□□□□□ -1.5
SF3A3-204ENST00000462258 PRO1933Q9H354 126 aa5.65□□□□□ -1.5
SF3A3-204ENST00000462258 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
SF3A3-204ENST00000462258 CD164Q04900 197 aa5.64□□□□□ -1.51
SF3A3-204ENST00000462258 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
SF3A3-204ENST00000462258 XP32Q5T750 250 aa5.63□□□□□ -1.51
SF3A3-204ENST00000462258 H7C2G1 150 aa5.62□□□□□ -1.51
SF3A3-204ENST00000462258 VAMP3Q15836 100 aa5.62□□□□□ -1.51
SF3A3-204ENST00000462258 C12orf57Q99622 126 aa5.62□□□□□ -1.51
SF3A3-204ENST00000462258 COX8AP10176 69 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms