RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 DIRC1Q969H9 104 aa4□□□□□ -1.77
CLK1-207ENST00000461981 A6NED7 52 aa4□□□□□ -1.77
CLK1-207ENST00000461981 ERC2-IT1O76042 136 aa4□□□□□ -1.77
CLK1-207ENST00000461981 HTN1P15515 57 aa4□□□□□ -1.77
CLK1-207ENST00000461981 PRR15LQ9BU68 103 aa4□□□□□ -1.77
CLK1-207ENST00000461981 CHCHD7Q9BUK0 85 aa4□□□□□ -1.77
CLK1-207ENST00000461981 SVEP1Q4LDE5 3571 aa4□□□□□ -1.77
CLK1-207ENST00000461981 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
CLK1-207ENST00000461981 NDUFA4O00483 81 aa4□□□□□ -1.77
CLK1-207ENST00000461981 ATP11AUNQ6ZP68 121 aa4□□□□□ -1.77
CLK1-207ENST00000461981 RYR2Q92736 4967 aa4□□□□□ -1.77
CLK1-207ENST00000461981 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 NTM-AS1Q6ZSK4 140 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 NKAPP1Q8N9T2 125 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 FAM30AQ9NZY2 134 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 SERTAD4-AS1Q5TG53 156 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
CLK1-207ENST00000461981 DEFB136Q30KP8 78 aa3.98□□□□□ -1.77
CLK1-207ENST00000461981 IGHV3-16A0A0C4DH30 117 aa3.98□□□□□ -1.77
CLK1-207ENST00000461981 G3V318 75 aa3.98□□□□□ -1.77
CLK1-207ENST00000461981 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
CLK1-207ENST00000461981 CUBNO60494 3623 aa3.98□□□□□ -1.77
CLK1-207ENST00000461981 VPREB1P12018 145 aa3.97□□□□□ -1.77
CLK1-207ENST00000461981 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
CLK1-207ENST00000461981 IGKV3OR2-268A0A0C4DH90 116 aa3.97□□□□□ -1.77
CLK1-207ENST00000461981 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
CLK1-207ENST00000461981 CDK2AP2O75956 126 aa3.96□□□□□ -1.77
CLK1-207ENST00000461981 A8MTW9 85 aa3.96□□□□□ -1.78
CLK1-207ENST00000461981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.96□□□□□ -1.78
CLK1-207ENST00000461981 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
CLK1-207ENST00000461981 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
CLK1-207ENST00000461981 LOC110117498A0A087WWA1 95 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 TRBV6-4A0A1B0GX49 114 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 KLLNB2CW77 178 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 Q6ZSN1 163 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 IGKV4-1P06312 121 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 C10orf25Q5T742 122 aa3.95□□□□□ -1.78
CLK1-207ENST00000461981 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
CLK1-207ENST00000461981 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 SMIM29Q86T20 159 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 MAP6D1Q9H9H5 199 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 IGLV4-60A0A075B6I1 120 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 PRM2P04554 102 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 LINC00313P59037 77 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 MOBPQ13875 183 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 SPINK13Q1W4C9 94 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 LINC00612Q8N6U2 182 aa3.94□□□□□ -1.78
CLK1-207ENST00000461981 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
CLK1-207ENST00000461981 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
CLK1-207ENST00000461981 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
CLK1-207ENST00000461981 DNAH17Q9UFH2 4485 aa3.93□□□□□ -1.78
CLK1-207ENST00000461981 Q6ZQY7 126 aa3.92□□□□□ -1.78
CLK1-207ENST00000461981 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
CLK1-207ENST00000461981 LIMD2Q9BT23 127 aa3.92□□□□□ -1.78
CLK1-207ENST00000461981 HERC2O95714 4834 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 WNK1Q9H4A3 2382 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 K7EQD1 137 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 IGHV3-11P01762 117 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
CLK1-207ENST00000461981 Q6ZR54 194 aa3.91□□□□□ -1.78
CLK1-207ENST00000461981 A0A0J9YWU9 116 aa3.9□□□□□ -1.78
CLK1-207ENST00000461981 LY6G6CO95867 125 aa3.9□□□□□ -1.78
CLK1-207ENST00000461981 ODF3L2Q3SX64 289 aa3.9□□□□□ -1.78
CLK1-207ENST00000461981 RYR3Q15413 4870 aa3.9□□□□□ -1.78
CLK1-207ENST00000461981 PLECQ15149 4684 aaKnown RBP3.9□□□□□ -1.78
CLK1-207ENST00000461981 LINC00575Q6W349 94 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 CYP4F30PQ9H0H9 118 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.9□□□□□ -1.79
CLK1-207ENST00000461981 H3BNG1 76 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 Q75L30 129 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 Q8NAQ8 132 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 ST20-AS1Q8NBB2 130 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 RHPN1-AS1Q9BWJ2 59 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
CLK1-207ENST00000461981 PDE6GP18545 87 aa3.89□□□□□ -1.79
CLK1-207ENST00000461981 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
CLK1-207ENST00000461981 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
CLK1-207ENST00000461981 ZNF706Q9Y5V0 76 aaPredicted RBP3.89□□□□□ -1.79
CLK1-207ENST00000461981 DNAH10Q8IVF4 4471 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 TRGV2A0A075B6R0 118 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 LYSTQ99698 3801 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 IGHV4-28A0A0C4DH34 117 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 IGHV3-53P01767 116 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 ZCCHC13Q8WW36 166 aaKnown RBP3.88□□□□□ -1.79
CLK1-207ENST00000461981 MP68P56378 58 aa3.88□□□□□ -1.79
CLK1-207ENST00000461981 TGP01266 2768 aa3.87□□□□□ -1.79
CLK1-207ENST00000461981 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
CLK1-207ENST00000461981 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
CLK1-207ENST00000461981 CSNK1G2-AS1Q8NCQ2 148 aa3.86□□□□□ -1.79
CLK1-207ENST00000461981 NOTCH1P46531 2555 aa3.86□□□□□ -1.79
CLK1-207ENST00000461981 LOC101927531A0A1B0GV80 90 aa3.86□□□□□ -1.79
CLK1-207ENST00000461981 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
CLK1-207ENST00000461981 SPART-AS1P0CW21 52 aa3.85□□□□□ -1.79
CLK1-207ENST00000461981 COX7BP24311 80 aa3.85□□□□□ -1.79
CLK1-207ENST00000461981 X6R8D5 127 aa3.85□□□□□ -1.79
CLK1-207ENST00000461981 SPINK7P58062 85 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms