RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 PRR34Q9NV39 138 aa7.79□□□□□ -1.16
NPHP4-204ENST00000460696 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
NPHP4-204ENST00000460696 H3BNG1 76 aa7.78□□□□□ -1.16
NPHP4-204ENST00000460696 LINC01547P58512 204 aaPredicted RBP7.78□□□□□ -1.16
NPHP4-204ENST00000460696 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
NPHP4-204ENST00000460696 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
NPHP4-204ENST00000460696 Q6ZRP5 223 aa7.78□□□□□ -1.16
NPHP4-204ENST00000460696 TENM3Q9P273 2699 aa7.77□□□□□ -1.16
NPHP4-204ENST00000460696 Q8N9L7 120 aa7.77□□□□□ -1.17
NPHP4-204ENST00000460696 C1orf137Q5JT78 98 aa7.77□□□□□ -1.17
NPHP4-204ENST00000460696 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
NPHP4-204ENST00000460696 VPREB1P12018 145 aa7.75□□□□□ -1.17
NPHP4-204ENST00000460696 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
NPHP4-204ENST00000460696 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
NPHP4-204ENST00000460696 LINC00588Q9Y4M8 146 aa7.75□□□□□ -1.17
NPHP4-204ENST00000460696 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
NPHP4-204ENST00000460696 Q6ZQT0 140 aa7.75□□□□□ -1.17
NPHP4-204ENST00000460696 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
NPHP4-204ENST00000460696 FAM236DA0A1B0GTK5 79 aa7.74□□□□□ -1.17
NPHP4-204ENST00000460696 FAM236CP0DP71 79 aa7.74□□□□□ -1.17
NPHP4-204ENST00000460696 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
NPHP4-204ENST00000460696 TMEM258P61165 79 aa7.73□□□□□ -1.17
NPHP4-204ENST00000460696 H0Y9J4 135 aa7.73□□□□□ -1.17
NPHP4-204ENST00000460696 PRLHP81277 87 aa7.73□□□□□ -1.17
NPHP4-204ENST00000460696 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
NPHP4-204ENST00000460696 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
NPHP4-204ENST00000460696 NDUFS5O43920 106 aa7.72□□□□□ -1.17
NPHP4-204ENST00000460696 C15orf56Q8N910 161 aa7.72□□□□□ -1.17
NPHP4-204ENST00000460696 TRAV7A0A075B6U4 112 aa7.71□□□□□ -1.17
NPHP4-204ENST00000460696 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.17
NPHP4-204ENST00000460696 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
NPHP4-204ENST00000460696 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
NPHP4-204ENST00000460696 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 VWFP04275 2813 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 LRCOL1A6NCL2 159 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 F8WDY8 70 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
NPHP4-204ENST00000460696 NDUFB1O75438 58 aa7.69□□□□□ -1.18
NPHP4-204ENST00000460696 PRYO14603 147 aa7.69□□□□□ -1.18
NPHP4-204ENST00000460696 MP68P56378 58 aa7.69□□□□□ -1.18
NPHP4-204ENST00000460696 FAM30AQ9NZY2 134 aa7.69□□□□□ -1.18
NPHP4-204ENST00000460696 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
NPHP4-204ENST00000460696 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
NPHP4-204ENST00000460696 Q8NDZ9 215 aa7.68□□□□□ -1.18
NPHP4-204ENST00000460696 LOC110117498A0A087WWA1 95 aa7.67□□□□□ -1.18
NPHP4-204ENST00000460696 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
NPHP4-204ENST00000460696 A0A087WSZ3 146 aa7.66□□□□□ -1.18
NPHP4-204ENST00000460696 TRBV7-6A0A0J9YX20 115 aa7.66□□□□□ -1.18
NPHP4-204ENST00000460696 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
NPHP4-204ENST00000460696 PRR4Q16378 134 aa7.66□□□□□ -1.18
NPHP4-204ENST00000460696 CASC10Q5T4H9 136 aa7.66□□□□□ -1.18
NPHP4-204ENST00000460696 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
NPHP4-204ENST00000460696 CRYGAP11844 174 aa7.65□□□□□ -1.18
NPHP4-204ENST00000460696 CXCL6P80162 114 aa7.65□□□□□ -1.18
NPHP4-204ENST00000460696 LINC00528Q8N1L1 170 aa7.65□□□□□ -1.18
NPHP4-204ENST00000460696 Q6ZRX8 168 aa7.65□□□□□ -1.18
NPHP4-204ENST00000460696 C1orf134Q5TEV5 83 aa7.63□□□□□ -1.19
NPHP4-204ENST00000460696 Q9BRP9 147 aa7.63□□□□□ -1.19
NPHP4-204ENST00000460696 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
NPHP4-204ENST00000460696 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
NPHP4-204ENST00000460696 TENM2Q9NT68 2774 aa7.62□□□□□ -1.19
NPHP4-204ENST00000460696 WIPF1O43516 503 aa7.61□□□□□ -1.19
NPHP4-204ENST00000460696 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
NPHP4-204ENST00000460696 KCNQ1DNQ9H478 68 aa7.61□□□□□ -1.19
NPHP4-204ENST00000460696 NDUFC1O43677 76 aa7.6□□□□□ -1.19
NPHP4-204ENST00000460696 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
NPHP4-204ENST00000460696 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
NPHP4-204ENST00000460696 TM2D3Q9BRN9 247 aa7.6□□□□□ -1.19
NPHP4-204ENST00000460696 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.2
NPHP4-204ENST00000460696 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.2
NPHP4-204ENST00000460696 Q8N377 158 aa7.58□□□□□ -1.2
NPHP4-204ENST00000460696 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
NPHP4-204ENST00000460696 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 Q8NBF4 154 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 A0A0G2JQZ4 141 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 A0A1W2PNN7 141 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 SMIM29Q86T20 159 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 LINC00476Q8WZB0 136 aa7.57□□□□□ -1.2
NPHP4-204ENST00000460696 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
NPHP4-204ENST00000460696 LINC00208Q96KT6 92 aa7.54□□□□□ -1.2
NPHP4-204ENST00000460696 ERC2-IT1O76042 136 aa7.53□□□□□ -1.2
NPHP4-204ENST00000460696 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
NPHP4-204ENST00000460696 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.2
NPHP4-204ENST00000460696 EPM2AB3EWF7 344 aa7.52□□□□□ -1.21
NPHP4-204ENST00000460696 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
NPHP4-204ENST00000460696 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
NPHP4-204ENST00000460696 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
NPHP4-204ENST00000460696 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
NPHP4-204ENST00000460696 SRRM2Q9UQ35 2752 aaKnown RBP7.5□□□□□ -1.21
NPHP4-204ENST00000460696 TLX1NBP0CAT3 122 aa7.5□□□□□ -1.21
NPHP4-204ENST00000460696 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
NPHP4-204ENST00000460696 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
NPHP4-204ENST00000460696 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
NPHP4-204ENST00000460696 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
NPHP4-204ENST00000460696 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
NPHP4-204ENST00000460696 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
NPHP4-204ENST00000460696 BCE1O60756 84 aa7.49□□□□□ -1.21
NPHP4-204ENST00000460696 RPL37AP61513 92 aaKnown RBP7.49□□□□□ -1.21
NPHP4-204ENST00000460696 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms