RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 HIST1H2BBP33778 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BDP58876 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BCP62807 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST2H2BEQ16778 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.75□□□□□ -1.49
HDLBP-228ENST00000459788 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 LINC01545Q5VT33 79 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 PET117Q6UWS5 81 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 SSBP3-AS1Q7Z2R9 100 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BHQ93079 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BNQ99877 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 HIST1H2BMQ99879 126 aa5.75□□□□□ -1.49
HDLBP-228ENST00000459788 XP32Q5T750 250 aa5.74□□□□□ -1.49
HDLBP-228ENST00000459788 DAND5Q8N907 189 aa5.74□□□□□ -1.49
HDLBP-228ENST00000459788 PMCHL2Q9BQD1 86 aa5.74□□□□□ -1.49
HDLBP-228ENST00000459788 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
HDLBP-228ENST00000459788 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
HDLBP-228ENST00000459788 AKR1D1P51857 326 aa5.73□□□□□ -1.49
HDLBP-228ENST00000459788 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
HDLBP-228ENST00000459788 SPANXCQ9NY87 97 aa5.73□□□□□ -1.49
HDLBP-228ENST00000459788 MUC2Q02817 5179 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
HDLBP-228ENST00000459788 HINT1P49773 126 aaPredicted RBP5.72□□□□□ -1.49
HDLBP-228ENST00000459788 Q8NBF4 154 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 Q9BRP9 147 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 CDIP1Q9H305 208 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
HDLBP-228ENST00000459788 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
HDLBP-228ENST00000459788 GAGE2AQ6NT46 116 aa5.71□□□□□ -1.5
HDLBP-228ENST00000459788 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.5
HDLBP-228ENST00000459788 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
HDLBP-228ENST00000459788 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
HDLBP-228ENST00000459788 LINC00308Q8TCZ7 52 aa5.7□□□□□ -1.5
HDLBP-228ENST00000459788 LITAFQ99732 161 aa5.7□□□□□ -1.5
HDLBP-228ENST00000459788 SPANXDQ9BXN6 97 aa5.7□□□□□ -1.5
HDLBP-228ENST00000459788 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
HDLBP-228ENST00000459788 SLC25A34Q6PIV7 304 aa5.69□□□□□ -1.5
HDLBP-228ENST00000459788 DHRS4-AS1Q9P1J3 65 aa5.69□□□□□ -1.5
HDLBP-228ENST00000459788 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
HDLBP-228ENST00000459788 C20orf202A1L168 122 aa5.68□□□□□ -1.5
HDLBP-228ENST00000459788 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
HDLBP-228ENST00000459788 SPRR1BP22528 89 aa5.68□□□□□ -1.5
HDLBP-228ENST00000459788 Q6ZVH6 145 aa5.68□□□□□ -1.5
HDLBP-228ENST00000459788 TRBV7-6A0A0J9YX20 115 aa5.67□□□□□ -1.5
HDLBP-228ENST00000459788 SLC25A20O43772 301 aa5.67□□□□□ -1.5
HDLBP-228ENST00000459788 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
HDLBP-228ENST00000459788 C3orf79P0CE67 100 aa5.67□□□□□ -1.5
HDLBP-228ENST00000459788 MOBPQ13875 183 aa5.67□□□□□ -1.5
HDLBP-228ENST00000459788 IFITM1P13164 125 aa5.66□□□□□ -1.5
HDLBP-228ENST00000459788 NPC2P61916 151 aa5.66□□□□□ -1.5
HDLBP-228ENST00000459788 SNRPEP62304 92 aaKnown RBP5.66□□□□□ -1.5
HDLBP-228ENST00000459788 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
HDLBP-228ENST00000459788 IGLV9-49A0A0B4J1Y8 123 aa5.65□□□□□ -1.5
HDLBP-228ENST00000459788 Q8N377 158 aa5.65□□□□□ -1.5
HDLBP-228ENST00000459788 OR13C6PQ8NH95 151 aa5.65□□□□□ -1.5
HDLBP-228ENST00000459788 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
HDLBP-228ENST00000459788 KRTDAPP60985 99 aa5.63□□□□□ -1.51
HDLBP-228ENST00000459788 SCGB1D4Q6XE38 83 aa5.63□□□□□ -1.51
HDLBP-228ENST00000459788 A4D1N5 150 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 COX7BP24311 80 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 C9orf153Q5TBE3 101 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 LIMD2Q9BT23 127 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 LAMTOR3Q9UHA4 124 aa5.62□□□□□ -1.51
HDLBP-228ENST00000459788 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
HDLBP-228ENST00000459788 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
HDLBP-228ENST00000459788 CD164Q04900 197 aa5.61□□□□□ -1.51
HDLBP-228ENST00000459788 C6orf99Q4VX62 202 aa5.6□□□□□ -1.51
HDLBP-228ENST00000459788 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
HDLBP-228ENST00000459788 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
HDLBP-228ENST00000459788 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
HDLBP-228ENST00000459788 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
HDLBP-228ENST00000459788 TEX49A0A1B0GTD5 131 aa5.59□□□□□ -1.51
HDLBP-228ENST00000459788 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
HDLBP-228ENST00000459788 NHP2Q9NX24 153 aaKnown RBP5.59□□□□□ -1.51
HDLBP-228ENST00000459788 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
HDLBP-228ENST00000459788 Q5XG85 94 aa5.58□□□□□ -1.52
HDLBP-228ENST00000459788 IGLV5-48A0A075B6I7 105 aa5.57□□□□□ -1.52
HDLBP-228ENST00000459788 TAL2Q16559 108 aa5.57□□□□□ -1.52
HDLBP-228ENST00000459788 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
HDLBP-228ENST00000459788 A6NDN8 102 aa5.56□□□□□ -1.52
HDLBP-228ENST00000459788 PCP2Q8IVA1 136 aa5.56□□□□□ -1.52
HDLBP-228ENST00000459788 MUSTN1Q8IVN3 82 aa5.56□□□□□ -1.52
HDLBP-228ENST00000459788 HSBP1L1C9JCN9 74 aa5.55□□□□□ -1.52
HDLBP-228ENST00000459788 S100A1P23297 94 aa5.55□□□□□ -1.52
HDLBP-228ENST00000459788 S100A2P29034 98 aa5.54□□□□□ -1.52
HDLBP-228ENST00000459788 VAMP3Q15836 100 aa5.54□□□□□ -1.52
HDLBP-228ENST00000459788 ATOH7Q8N100 152 aa5.54□□□□□ -1.52
HDLBP-228ENST00000459788 HIST3H2BBQ8N257 126 aa5.54□□□□□ -1.52
HDLBP-228ENST00000459788 H7C2G1 150 aa5.53□□□□□ -1.52
HDLBP-228ENST00000459788 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
HDLBP-228ENST00000459788 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
HDLBP-228ENST00000459788 HIST1H2BLQ99880 126 aa5.53□□□□□ -1.52
HDLBP-228ENST00000459788 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
HDLBP-228ENST00000459788 S100A6P06703 90 aa5.51□□□□□ -1.53
HDLBP-228ENST00000459788 Q1RN00 199 aa5.51□□□□□ -1.53
HDLBP-228ENST00000459788 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
HDLBP-228ENST00000459788 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
HDLBP-228ENST00000459788 PPDPFLQ8WWR9 84 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms