RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
SYNE2-207ENST00000458046 HTN3P15516 51 aa7.93□□□□□ -1.14
SYNE2-207ENST00000458046 OBSCN-AS1Q96MR7 158 aa7.93□□□□□ -1.14
SYNE2-207ENST00000458046 CELA1Q9UNI1 258 aa7.93□□□□□ -1.14
SYNE2-207ENST00000458046 UBE2BP63146 152 aa7.92□□□□□ -1.14
SYNE2-207ENST00000458046 Q8NDZ9 215 aa7.92□□□□□ -1.14
SYNE2-207ENST00000458046 Q6ZRP5 223 aa7.92□□□□□ -1.14
SYNE2-207ENST00000458046 Q8N814 137 aa7.91□□□□□ -1.14
SYNE2-207ENST00000458046 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
SYNE2-207ENST00000458046 C9orf66Q5T8R8 295 aa7.9□□□□□ -1.15
SYNE2-207ENST00000458046 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.15
SYNE2-207ENST00000458046 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
SYNE2-207ENST00000458046 COX17Q14061 63 aa7.89□□□□□ -1.15
SYNE2-207ENST00000458046 A0A087WVE0 104 aa7.88□□□□□ -1.15
SYNE2-207ENST00000458046 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
SYNE2-207ENST00000458046 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
SYNE2-207ENST00000458046 DIRC1Q969H9 104 aa7.88□□□□□ -1.15
SYNE2-207ENST00000458046 KLK12Q9UKR0 248 aa7.87□□□□□ -1.15
SYNE2-207ENST00000458046 ATOX1O00244 68 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 CCKP06307 115 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 Q8NAQ8 132 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 LINC00167Q96N53 147 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 UPK3BQ9BT76 320 aa7.86□□□□□ -1.15
SYNE2-207ENST00000458046 CHTF8P0CG12 524 aa7.85□□□□□ -1.15
SYNE2-207ENST00000458046 Q6JHZ5 121 aa7.85□□□□□ -1.15
SYNE2-207ENST00000458046 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
SYNE2-207ENST00000458046 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
SYNE2-207ENST00000458046 JMJD7-PLA2G4BH0Y9G9 81 aa7.84□□□□□ -1.15
SYNE2-207ENST00000458046 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
SYNE2-207ENST00000458046 HIST1H4AP62805 103 aaKnown RBP7.84□□□□□ -1.16
SYNE2-207ENST00000458046 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.16
SYNE2-207ENST00000458046 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
SYNE2-207ENST00000458046 MIFP14174 115 aa7.83□□□□□ -1.16
SYNE2-207ENST00000458046 LELP1Q5T871 98 aa7.83□□□□□ -1.16
SYNE2-207ENST00000458046 WFDC9Q8NEX5 89 aa7.83□□□□□ -1.16
SYNE2-207ENST00000458046 ENHOQ6UWT2 76 aa7.83□□□□□ -1.16
SYNE2-207ENST00000458046 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
SYNE2-207ENST00000458046 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
SYNE2-207ENST00000458046 ADM2Q7Z4H4 148 aa7.81□□□□□ -1.16
SYNE2-207ENST00000458046 FUSP35637 526 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNE2-207ENST00000458046 A0A0J9YWU9 116 aa7.8□□□□□ -1.16
SYNE2-207ENST00000458046 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
SYNE2-207ENST00000458046 TGP01266 2768 aa7.8□□□□□ -1.16
SYNE2-207ENST00000458046 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
SYNE2-207ENST00000458046 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
SYNE2-207ENST00000458046 MGAM2Q2M2H8 2515 aa7.79□□□□□ -1.16
SYNE2-207ENST00000458046 LYPD5Q6UWN5 251 aa7.79□□□□□ -1.16
SYNE2-207ENST00000458046 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
SYNE2-207ENST00000458046 EGFEM1PQ0D2K5 195 aa7.79□□□□□ -1.16
SYNE2-207ENST00000458046 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-207ENST00000458046 C6orf48Q9UBA6 75 aa7.79□□□□□ -1.16
SYNE2-207ENST00000458046 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
SYNE2-207ENST00000458046 HERC2O95714 4834 aa7.78□□□□□ -1.16
SYNE2-207ENST00000458046 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
SYNE2-207ENST00000458046 HIGD2BQ4VC39 106 aa7.78□□□□□ -1.16
SYNE2-207ENST00000458046 A6NN06 94 aa7.77□□□□□ -1.16
SYNE2-207ENST00000458046 CXCL6P80162 114 aa7.77□□□□□ -1.16
SYNE2-207ENST00000458046 Q6ZQY7 126 aa7.77□□□□□ -1.16
SYNE2-207ENST00000458046 M0R2N4 97 aa7.77□□□□□ -1.17
SYNE2-207ENST00000458046 SERP2Q8N6R1 65 aa7.77□□□□□ -1.17
SYNE2-207ENST00000458046 WFDC10BQ8IUB3 73 aa7.76□□□□□ -1.17
SYNE2-207ENST00000458046 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
SYNE2-207ENST00000458046 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
SYNE2-207ENST00000458046 Q6ZQT0 140 aa7.75□□□□□ -1.17
SYNE2-207ENST00000458046 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
SYNE2-207ENST00000458046 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-207ENST00000458046 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
SYNE2-207ENST00000458046 KPRPQ5T749 579 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-207ENST00000458046 MUC7Q8TAX7 377 aa7.73□□□□□ -1.17
SYNE2-207ENST00000458046 UBE2AP49459 152 aa7.71□□□□□ -1.17
SYNE2-207ENST00000458046 HAMPP81172 84 aa7.71□□□□□ -1.17
SYNE2-207ENST00000458046 Q6ZTC4 211 aa7.71□□□□□ -1.17
SYNE2-207ENST00000458046 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
SYNE2-207ENST00000458046 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
SYNE2-207ENST00000458046 COX7BP24311 80 aa7.7□□□□□ -1.18
SYNE2-207ENST00000458046 EPPK1P58107 5090 aaKnown RBP7.7□□□□□ -1.18
SYNE2-207ENST00000458046 KRTAP4-16G5E9R7 235 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-207ENST00000458046 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
SYNE2-207ENST00000458046 ESRGQ1W209 222 aa7.68□□□□□ -1.18
SYNE2-207ENST00000458046 DHRS4-AS1Q9P1J3 65 aa7.68□□□□□ -1.18
SYNE2-207ENST00000458046 TENM3Q9P273 2699 aa7.68□□□□□ -1.18
SYNE2-207ENST00000458046 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-207ENST00000458046 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
SYNE2-207ENST00000458046 DYNC2H1Q8NCM8 4307 aaKnown RBP7.67□□□□□ -1.18
SYNE2-207ENST00000458046 KRTAP10-11P60412 298 aa7.67□□□□□ -1.18
SYNE2-207ENST00000458046 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
SYNE2-207ENST00000458046 B9D2Q9BPU9 175 aa7.67□□□□□ -1.18
SYNE2-207ENST00000458046 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
SYNE2-207ENST00000458046 IGKV2D-24A0A075B6R9 120 aa7.66□□□□□ -1.18
SYNE2-207ENST00000458046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-207ENST00000458046 OCR1Q9BZK8 76 aa7.65□□□□□ -1.19
SYNE2-207ENST00000458046 MPLKIPQ8TAP9 179 aa7.64□□□□□ -1.19
SYNE2-207ENST00000458046 PDE6GP18545 87 aa7.64□□□□□ -1.19
SYNE2-207ENST00000458046 ATP11AUNQ6ZP68 121 aa7.64□□□□□ -1.19
SYNE2-207ENST00000458046 C20orf197Q8N268 126 aa7.64□□□□□ -1.19
SYNE2-207ENST00000458046 LINC00476Q8WZB0 136 aa7.64□□□□□ -1.19
SYNE2-207ENST00000458046 H3BNG1 76 aa7.63□□□□□ -1.19
SYNE2-207ENST00000458046 TRAV10A0A0B4J240 114 aa7.63□□□□□ -1.19
SYNE2-207ENST00000458046 TRBV7-4A0A0J9YYF1 115 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms