RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 LINC00474Q9P2X8 69 aa12.55□□□□□ -0.4
SEMA3B-208ENST00000456210 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
SEMA3B-208ENST00000456210 M0R378 163 aa12.54□□□□□ -0.4
SEMA3B-208ENST00000456210 DEFB4AO15263 64 aa12.54□□□□□ -0.4
SEMA3B-208ENST00000456210 PRYO14603 147 aa12.53□□□□□ -0.4
SEMA3B-208ENST00000456210 DEFB135Q30KP9 77 aa12.52□□□□□ -0.41
SEMA3B-208ENST00000456210 MDFIQ99750 246 aa12.52□□□□□ -0.41
SEMA3B-208ENST00000456210 Q8N9L7 120 aa12.5□□□□□ -0.41
SEMA3B-208ENST00000456210 EGFEM1PQ0D2K5 195 aa12.5□□□□□ -0.41
SEMA3B-208ENST00000456210 PKD1L1Q8TDX9 2849 aa12.49□□□□□ -0.41
SEMA3B-208ENST00000456210 Q8NAQ8 132 aa12.49□□□□□ -0.41
SEMA3B-208ENST00000456210 CAMK2N2Q96S95 79 aa12.47□□□□□ -0.41
SEMA3B-208ENST00000456210 APOC4P55056 127 aa12.47□□□□□ -0.41
SEMA3B-208ENST00000456210 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
SEMA3B-208ENST00000456210 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.42
SEMA3B-208ENST00000456210 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEMA3B-208ENST00000456210 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
SEMA3B-208ENST00000456210 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
SEMA3B-208ENST00000456210 Q6ZTC4 211 aa12.44□□□□□ -0.42
SEMA3B-208ENST00000456210 ESRGQ1W209 222 aa12.43□□□□□ -0.42
SEMA3B-208ENST00000456210 KRTAP26-1Q6PEX3 210 aa12.43□□□□□ -0.42
SEMA3B-208ENST00000456210 Q6ZRU5 148 aa12.42□□□□□ -0.42
SEMA3B-208ENST00000456210 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
SEMA3B-208ENST00000456210 HTN3P15516 51 aa12.42□□□□□ -0.42
SEMA3B-208ENST00000456210 A0A1B0GW54 56 aa12.41□□□□□ -0.42
SEMA3B-208ENST00000456210 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
SEMA3B-208ENST00000456210 LCE6AA0A183 80 aa12.4□□□□□ -0.42
SEMA3B-208ENST00000456210 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
SEMA3B-208ENST00000456210 HIGD2AQ9BW72 106 aa12.4□□□□□ -0.42
SEMA3B-208ENST00000456210 C15orf56Q8N910 161 aa12.39□□□□□ -0.43
SEMA3B-208ENST00000456210 ANK2Q01484 3957 aa12.38□□□□□ -0.43
SEMA3B-208ENST00000456210 BRK1Q8WUW1 75 aa12.38□□□□□ -0.43
SEMA3B-208ENST00000456210 Q8N377 158 aa12.38□□□□□ -0.43
SEMA3B-208ENST00000456210 KCNQ1DNQ9H478 68 aa12.38□□□□□ -0.43
SEMA3B-208ENST00000456210 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
SEMA3B-208ENST00000456210 KPRPQ5T749 579 aaPredicted RBP12.36□□□□□ -0.43
SEMA3B-208ENST00000456210 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
SEMA3B-208ENST00000456210 Q6ZRP5 223 aa12.35□□□□□ -0.43
SEMA3B-208ENST00000456210 F8WDY8 70 aa12.34□□□□□ -0.43
SEMA3B-208ENST00000456210 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
SEMA3B-208ENST00000456210 SMIM29Q86T20 159 aa12.34□□□□□ -0.43
SEMA3B-208ENST00000456210 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
SEMA3B-208ENST00000456210 A0A1W2PNM2 257 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 hDV103S1A0JD37 113 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 TNP2Q05952 138 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 DEFB105AQ8NG35 78 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 FAM30AQ9NZY2 134 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 CMYA5Q8N3K9 4069 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 H3BNG1 76 aa12.3□□□□□ -0.44
SEMA3B-208ENST00000456210 DHRS4-AS1Q9P1J3 65 aa12.29□□□□□ -0.44
SEMA3B-208ENST00000456210 NKAPP1Q8N9T2 125 aa12.28□□□□□ -0.44
SEMA3B-208ENST00000456210 C7orf33Q8WU49 177 aa12.28□□□□□ -0.44
SEMA3B-208ENST00000456210 ZCCHC13Q8WW36 166 aaKnown RBP12.28□□□□□ -0.44
SEMA3B-208ENST00000456210 Q8NBF4 154 aa12.26□□□□□ -0.45
SEMA3B-208ENST00000456210 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
SEMA3B-208ENST00000456210 Q6ZRX8 168 aa12.26□□□□□ -0.45
SEMA3B-208ENST00000456210 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
SEMA3B-208ENST00000456210 SYCNQ0VAF6 134 aa12.25□□□□□ -0.45
SEMA3B-208ENST00000456210 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
SEMA3B-208ENST00000456210 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
SEMA3B-208ENST00000456210 KRTAP4-16G5E9R7 235 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-208ENST00000456210 C1orf195Q5TG92 126 aa12.24□□□□□ -0.45
SEMA3B-208ENST00000456210 PLA2G2DQ9UNK4 145 aa12.24□□□□□ -0.45
SEMA3B-208ENST00000456210 NOTCH1P46531 2555 aa12.24□□□□□ -0.45
SEMA3B-208ENST00000456210 Q9BRP9 147 aa12.23□□□□□ -0.45
SEMA3B-208ENST00000456210 ETDCA0A1B0GVM5 59 aa12.22□□□□□ -0.45
SEMA3B-208ENST00000456210 DSCR10P59022 87 aa12.22□□□□□ -0.45
SEMA3B-208ENST00000456210 Q1T7F1 81 aa12.22□□□□□ -0.45
SEMA3B-208ENST00000456210 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
SEMA3B-208ENST00000456210 SPRR1AP35321 89 aa12.22□□□□□ -0.45
SEMA3B-208ENST00000456210 TLX1NBP0CAT3 122 aa12.2□□□□□ -0.46
SEMA3B-208ENST00000456210 C1orf64Q8NEQ6 169 aa12.2□□□□□ -0.46
SEMA3B-208ENST00000456210 IGLV5-37A0A075B6J1 123 aa12.19□□□□□ -0.46
SEMA3B-208ENST00000456210 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
SEMA3B-208ENST00000456210 K7EQZ3 153 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 KRTAP21-3Q3LHN1 58 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 OXLD1Q5BKU9 147 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 IGLV1-50A0A075B6I6 118 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
SEMA3B-208ENST00000456210 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-208ENST00000456210 PRR15Q8IV56 129 aa12.15□□□□□ -0.46
SEMA3B-208ENST00000456210 ST20-AS1Q8NBB2 130 aa12.15□□□□□ -0.46
SEMA3B-208ENST00000456210 HCG22E2RYF7 251 aa12.13□□□□□ -0.47
SEMA3B-208ENST00000456210 RPL37AP8A6NKH3 93 aa12.12□□□□□ -0.47
SEMA3B-208ENST00000456210 V9GYY9 64 aa12.12□□□□□ -0.47
SEMA3B-208ENST00000456210 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
SEMA3B-208ENST00000456210 NDUFB1O75438 58 aa12.09□□□□□ -0.47
SEMA3B-208ENST00000456210 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
SEMA3B-208ENST00000456210 LRCOL1A6NCL2 159 aa12.08□□□□□ -0.48
SEMA3B-208ENST00000456210 KRTAP7-1Q8IUC3 87 aa12.07□□□□□ -0.48
SEMA3B-208ENST00000456210 PSCAO43653 123 aa12.06□□□□□ -0.48
SEMA3B-208ENST00000456210 PRB2P02812 416 aaPredicted RBP12.06□□□□□ -0.48
SEMA3B-208ENST00000456210 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
SEMA3B-208ENST00000456210 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
SEMA3B-208ENST00000456210 DNAH10OSP0CZ25 163 aa12.04□□□□□ -0.48
SEMA3B-208ENST00000456210 MRPL55Q7Z7F7 128 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-208ENST00000456210 RETNQ9HD89 108 aa12.03□□□□□ -0.48
SEMA3B-208ENST00000456210 UBE2BP63146 152 aa12.02□□□□□ -0.49
SEMA3B-208ENST00000456210 DNAH3Q8TD57 4116 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms