RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 IGKV3-7A0A075B6H7 116 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 NUPR2A6NF83 97 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 ODF3BA8MYP8 253 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 UQCR11O14957 56 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 MRPL33O75394 65 aaKnown RBP1.11□□□□□ -2.23
LINC02540-201ENST00000455554 APELAP0DMC3 54 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 CCL3L1P16619 93 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 CD52P31358 61 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 LY6EQ16553 131 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 Q6ZQY7 126 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
LINC02540-201ENST00000455554 CNOT1A5YKK6 2376 aaKnown RBP1.11□□□□□ -2.23
LINC02540-201ENST00000455554 DEFB131BA0A096LNP1 70 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 IGKV3OR2-268A0A0C4DH90 116 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 HRES1P13985 223 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 KRTAP13-2Q52LG2 175 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 Q8IZM0 81 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 PRO3102Q9H379 93 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 LINC00472Q9H8W2 130 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 R4GN34 69 aa1.1□□□□□ -2.23
LINC02540-201ENST00000455554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.1□□□□□ -2.23
LINC02540-201ENST00000455554 SPTBN1Q01082 2364 aaKnown RBP1.1□□□□□ -2.23
LINC02540-201ENST00000455554 A0A087WTM6 91 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 A0A1B0GU33 70 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 K7EQZ3 153 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 IGLV6-57P01721 117 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 IGFL1Q6UW32 110 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 PATE1Q8WXA2 126 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 TOMM7Q9P0U1 55 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 CCL26Q9Y258 94 aa1.09□□□□□ -2.23
LINC02540-201ENST00000455554 CACNA1BQ00975 2339 aa1.09□□□□□ -2.24
LINC02540-201ENST00000455554 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 OTOGLQ3ZCN5 2332 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 TRGV1A0A0A0MS02 117 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 A0A1B0GU69 56 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 A8MTW9 85 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 COX17Q14061 63 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 Q9Y3F1 56 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 MINOS1-NBL1R4GNA1 71 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 FAM186AA6NE01 2351 aa1.08□□□□□ -2.24
LINC02540-201ENST00000455554 DEFB1P60022 68 aa1.07□□□□□ -2.24
LINC02540-201ENST00000455554 WFDC13Q8IUB5 93 aa1.07□□□□□ -2.24
LINC02540-201ENST00000455554 DEFB108BQ8NET1 73 aa1.07□□□□□ -2.24
LINC02540-201ENST00000455554 KAAG1Q9UBP8 84 aa1.07□□□□□ -2.24
LINC02540-201ENST00000455554 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
LINC02540-201ENST00000455554 WNK1Q9H4A3 2382 aa1.07□□□□□ -2.24
LINC02540-201ENST00000455554 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 FBN1P35555 2871 aaKnown RBP1.06□□□□□ -2.24
LINC02540-201ENST00000455554 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 CACNA1GO43497 2377 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 MGAQ8IWI9 3026 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 IGF2RP11717 2491 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 A0A1W2PNN7 141 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
LINC02540-201ENST00000455554 ACYP2P14621 99 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 PCOTHQ58A44 107 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 MINOS1Q5TGZ0 78 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 WFDC10BQ8IUB3 73 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 LINC00304Q8N9R0 145 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 ACACAQ13085 2346 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 SPTBN2O15020 2390 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 CEP250Q9BV73 2442 aa1.06□□□□□ -2.24
LINC02540-201ENST00000455554 PKDREJQ9NTG1 2253 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 APC2O95996 2303 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 IGKV2-24A0A0C4DH68 120 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 KRTAP12-3P60328 96 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 Q96NJ1 140 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 CCL19Q99731 98 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 TP53AIP1Q9HCN2 124 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 PCNX1Q96RV3 2341 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 FLG2Q5D862 2391 aaPredicted RBP1.05□□□□□ -2.24
LINC02540-201ENST00000455554 ZDBF2Q9HCK1 2354 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 SPTA1P02549 2419 aa1.05□□□□□ -2.24
LINC02540-201ENST00000455554 PTPRZ1P23471 2315 aaPredicted RBP1.04□□□□□ -2.24
LINC02540-201ENST00000455554 SPTY2D1-AS1A0A0U1RR47 76 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 SSBP3-AS1Q7Z2R9 100 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 DEFB132Q7Z7B7 95 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 C2CD3Q4AC94 2353 aa1.04□□□□□ -2.24
LINC02540-201ENST00000455554 KMT2BQ9UMN6 2715 aaPredicted RBP1.03□□□□□ -2.24
LINC02540-201ENST00000455554 WDR87Q6ZQQ6 2873 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 GVQW2A0A096LPI5 108 aaPredicted RBP1.03□□□□□ -2.24
LINC02540-201ENST00000455554 MMP24-AS1A0A0U1RRL7 71 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 RPL37AP61513 92 aaKnown RBP1.03□□□□□ -2.24
LINC02540-201ENST00000455554 SPINK13Q1W4C9 94 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 C5orf56Q8N8D9 126 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 RHPN1-AS1Q9BWJ2 59 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 C6orf48Q9UBA6 75 aa1.03□□□□□ -2.24
LINC02540-201ENST00000455554 NCOR1O75376 2440 aa1.03□□□□□ -2.25
LINC02540-201ENST00000455554 ZFHX2Q9C0A1 2572 aaPredicted RBP1.02□□□□□ -2.25
LINC02540-201ENST00000455554 COL6A3P12111 3177 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 SRCAPQ6ZRS2 3230 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 LY6G6CO95867 125 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 TPRXLQ17RH7 258 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms