RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
HMGXB4-204ENST00000455359 HSD52Q0P140 79 aa8.72□□□□□ -1.01
HMGXB4-204ENST00000455359 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
HMGXB4-204ENST00000455359 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 A6NDN8 102 aa8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 A6NJY4 79 aa8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 ZNF73O43830 326 aaPredicted RBP8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 CEND1Q8N111 149 aa8.71□□□□□ -1.02
HMGXB4-204ENST00000455359 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
HMGXB4-204ENST00000455359 ETDCA0A1B0GVM5 59 aa8.7□□□□□ -1.02
HMGXB4-204ENST00000455359 HINT1P49773 126 aaPredicted RBP8.7□□□□□ -1.02
HMGXB4-204ENST00000455359 C12orf57Q99622 126 aa8.7□□□□□ -1.02
HMGXB4-204ENST00000455359 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
HMGXB4-204ENST00000455359 B5MCH6 92 aa8.67□□□□□ -1.02
HMGXB4-204ENST00000455359 TSTD3H0UI37 97 aa8.67□□□□□ -1.02
HMGXB4-204ENST00000455359 PRLHP81277 87 aa8.67□□□□□ -1.02
HMGXB4-204ENST00000455359 A0A0B4J2C4 111 aa8.66□□□□□ -1.02
HMGXB4-204ENST00000455359 OXTP01178 125 aa8.66□□□□□ -1.02
HMGXB4-204ENST00000455359 Q6ZRX8 168 aa8.66□□□□□ -1.02
HMGXB4-204ENST00000455359 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
HMGXB4-204ENST00000455359 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.02
HMGXB4-204ENST00000455359 CFC1BP0CG36 223 aa8.65□□□□□ -1.02
HMGXB4-204ENST00000455359 CFC1P0CG37 223 aa8.65□□□□□ -1.02
HMGXB4-204ENST00000455359 RAB37Q96AX2 223 aa8.65□□□□□ -1.02
HMGXB4-204ENST00000455359 MYCBP2O75592 4640 aa8.65□□□□□ -1.03
HMGXB4-204ENST00000455359 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-204ENST00000455359 C6orf99Q4VX62 202 aa8.64□□□□□ -1.03
HMGXB4-204ENST00000455359 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
HMGXB4-204ENST00000455359 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-204ENST00000455359 FXYD2P54710 66 aa8.63□□□□□ -1.03
HMGXB4-204ENST00000455359 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
HMGXB4-204ENST00000455359 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
HMGXB4-204ENST00000455359 COX7BP24311 80 aa8.62□□□□□ -1.03
HMGXB4-204ENST00000455359 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
HMGXB4-204ENST00000455359 DHRS4-AS1Q9P1J3 65 aa8.62□□□□□ -1.03
HMGXB4-204ENST00000455359 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 VAMP3Q15836 100 aa8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 LINC01600Q96MT4 127 aa8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-204ENST00000455359 M0R143 59 aa8.6□□□□□ -1.03
HMGXB4-204ENST00000455359 Q9BRP9 147 aa8.59□□□□□ -1.03
HMGXB4-204ENST00000455359 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.04
HMGXB4-204ENST00000455359 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
HMGXB4-204ENST00000455359 CTAG1AP78358 180 aa8.57□□□□□ -1.04
HMGXB4-204ENST00000455359 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
HMGXB4-204ENST00000455359 H7C2G1 150 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 SLC25A20O43772 301 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 CRYGAP11844 174 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 Q1RN00 199 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 H0YGX0 51 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 J3QL48 77 aa8.54□□□□□ -1.04
HMGXB4-204ENST00000455359 KRTAP10-8P60410 259 aa8.53□□□□□ -1.04
HMGXB4-204ENST00000455359 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
HMGXB4-204ENST00000455359 K7ERJ3 54 aa8.52□□□□□ -1.05
HMGXB4-204ENST00000455359 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
HMGXB4-204ENST00000455359 SNCGO76070 127 aa8.51□□□□□ -1.05
HMGXB4-204ENST00000455359 MT1HL1P0DM35 61 aa8.51□□□□□ -1.05
HMGXB4-204ENST00000455359 GAGE2AQ6NT46 116 aa8.5□□□□□ -1.05
HMGXB4-204ENST00000455359 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
HMGXB4-204ENST00000455359 hADV29S1A0JD25 119 aa8.49□□□□□ -1.05
HMGXB4-204ENST00000455359 COX6CP09669 75 aa8.49□□□□□ -1.05
HMGXB4-204ENST00000455359 SPRR1BP22528 89 aa8.49□□□□□ -1.05
HMGXB4-204ENST00000455359 A0A087X002 238 aa8.48□□□□□ -1.05
HMGXB4-204ENST00000455359 A0A1B0GX51 115 aa8.48□□□□□ -1.05
HMGXB4-204ENST00000455359 TRIAP1O43715 76 aa8.47□□□□□ -1.05
HMGXB4-204ENST00000455359 TSPAN13O95857 204 aa8.47□□□□□ -1.05
HMGXB4-204ENST00000455359 ST20-AS1Q8NBB2 130 aa8.47□□□□□ -1.05
HMGXB4-204ENST00000455359 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
HMGXB4-204ENST00000455359 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.06
HMGXB4-204ENST00000455359 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.06
HMGXB4-204ENST00000455359 PSMB2P49721 201 aa8.46□□□□□ -1.06
HMGXB4-204ENST00000455359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-204ENST00000455359 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
HMGXB4-204ENST00000455359 TNXBP22105 4242 aa8.44□□□□□ -1.06
HMGXB4-204ENST00000455359 GHRHP01286 108 aa8.44□□□□□ -1.06
HMGXB4-204ENST00000455359 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
HMGXB4-204ENST00000455359 OCIAD2Q56VL3 154 aa8.44□□□□□ -1.06
HMGXB4-204ENST00000455359 PPDPFLQ8WWR9 84 aa8.43□□□□□ -1.06
HMGXB4-204ENST00000455359 LAMTOR3Q9UHA4 124 aa8.43□□□□□ -1.06
HMGXB4-204ENST00000455359 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-204ENST00000455359 Q6ZQY7 126 aa8.42□□□□□ -1.06
HMGXB4-204ENST00000455359 BATFQ16520 125 aa8.41□□□□□ -1.06
HMGXB4-204ENST00000455359 SSBP3-AS1Q7Z2R9 100 aa8.41□□□□□ -1.06
HMGXB4-204ENST00000455359 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
HMGXB4-204ENST00000455359 SCGB1C2P0DMR2 95 aa8.4□□□□□ -1.06
HMGXB4-204ENST00000455359 LCE2DQ5TA82 110 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-204ENST00000455359 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
HMGXB4-204ENST00000455359 Q8N377 158 aa8.39□□□□□ -1.07
HMGXB4-204ENST00000455359 C3orf22Q8N5N4 141 aa8.39□□□□□ -1.07
HMGXB4-204ENST00000455359 H3BQ85 93 aa8.38□□□□□ -1.07
HMGXB4-204ENST00000455359 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms