RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
TNFRSF4-202ENST00000453580 Q8NBF4 154 aa9.81□□□□□ -0.84
TNFRSF4-202ENST00000453580 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
TNFRSF4-202ENST00000453580 TIMM17BO60830 172 aa9.8□□□□□ -0.84
TNFRSF4-202ENST00000453580 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF4-202ENST00000453580 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
TNFRSF4-202ENST00000453580 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
TNFRSF4-202ENST00000453580 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
TNFRSF4-202ENST00000453580 NPC2P61916 151 aa9.77□□□□□ -0.85
TNFRSF4-202ENST00000453580 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
TNFRSF4-202ENST00000453580 AKR1D1P51857 326 aa9.76□□□□□ -0.85
TNFRSF4-202ENST00000453580 LINC00518Q8N0U6 118 aa9.76□□□□□ -0.85
TNFRSF4-202ENST00000453580 COPS9Q8WXC6 57 aa9.76□□□□□ -0.85
TNFRSF4-202ENST00000453580 Q9BRP9 147 aa9.76□□□□□ -0.85
TNFRSF4-202ENST00000453580 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
TNFRSF4-202ENST00000453580 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
TNFRSF4-202ENST00000453580 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
TNFRSF4-202ENST00000453580 LINC00308Q8TCZ7 52 aa9.75□□□□□ -0.85
TNFRSF4-202ENST00000453580 C20orf202A1L168 122 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 MOBPQ13875 183 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 SPANXDQ9BXN6 97 aa9.74□□□□□ -0.85
TNFRSF4-202ENST00000453580 DHRS4-AS1Q9P1J3 65 aa9.73□□□□□ -0.85
TNFRSF4-202ENST00000453580 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
TNFRSF4-202ENST00000453580 SLC25A20O43772 301 aa9.71□□□□□ -0.86
TNFRSF4-202ENST00000453580 LITAFQ99732 161 aa9.71□□□□□ -0.86
TNFRSF4-202ENST00000453580 C3orf79P0CE67 100 aa9.7□□□□□ -0.86
TNFRSF4-202ENST00000453580 C9orf153Q5TBE3 101 aa9.7□□□□□ -0.86
TNFRSF4-202ENST00000453580 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
TNFRSF4-202ENST00000453580 KRTDAPP60985 99 aa9.69□□□□□ -0.86
TNFRSF4-202ENST00000453580 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
TNFRSF4-202ENST00000453580 Q6ZVH6 145 aa9.67□□□□□ -0.86
TNFRSF4-202ENST00000453580 IFITM1P13164 125 aa9.66□□□□□ -0.86
TNFRSF4-202ENST00000453580 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.86
TNFRSF4-202ENST00000453580 Q8N377 158 aa9.65□□□□□ -0.86
TNFRSF4-202ENST00000453580 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.86
TNFRSF4-202ENST00000453580 TRBV7-6A0A0J9YX20 115 aa9.64□□□□□ -0.87
TNFRSF4-202ENST00000453580 SPRR1BP22528 89 aa9.64□□□□□ -0.87
TNFRSF4-202ENST00000453580 COX7BP24311 80 aa9.64□□□□□ -0.87
TNFRSF4-202ENST00000453580 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
TNFRSF4-202ENST00000453580 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
TNFRSF4-202ENST00000453580 ST20-AS1Q8NBB2 130 aa9.62□□□□□ -0.87
TNFRSF4-202ENST00000453580 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
TNFRSF4-202ENST00000453580 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
TNFRSF4-202ENST00000453580 C6orf99Q4VX62 202 aa9.61□□□□□ -0.87
TNFRSF4-202ENST00000453580 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
TNFRSF4-202ENST00000453580 TAL2Q16559 108 aa9.6□□□□□ -0.87
TNFRSF4-202ENST00000453580 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
TNFRSF4-202ENST00000453580 A4D1N5 150 aa9.58□□□□□ -0.88
TNFRSF4-202ENST00000453580 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
TNFRSF4-202ENST00000453580 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
TNFRSF4-202ENST00000453580 A6NDN8 102 aa9.57□□□□□ -0.88
TNFRSF4-202ENST00000453580 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
TNFRSF4-202ENST00000453580 MUC2Q02817 5179 aa9.57□□□□□ -0.88
TNFRSF4-202ENST00000453580 ANKRD39Q53RE8 183 aa9.56□□□□□ -0.88
TNFRSF4-202ENST00000453580 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
TNFRSF4-202ENST00000453580 CD164Q04900 197 aa9.55□□□□□ -0.88
TNFRSF4-202ENST00000453580 S100A2P29034 98 aa9.54□□□□□ -0.88
TNFRSF4-202ENST00000453580 ATOH7Q8N100 152 aa9.54□□□□□ -0.88
TNFRSF4-202ENST00000453580 PRO1933Q9H354 126 aa9.54□□□□□ -0.88
TNFRSF4-202ENST00000453580 HSBP1L1C9JCN9 74 aa9.53□□□□□ -0.88
TNFRSF4-202ENST00000453580 MUSTN1Q8IVN3 82 aa9.53□□□□□ -0.88
TNFRSF4-202ENST00000453580 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
TNFRSF4-202ENST00000453580 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
TNFRSF4-202ENST00000453580 VAMP3Q15836 100 aa9.5□□□□□ -0.89
TNFRSF4-202ENST00000453580 H7C2G1 150 aa9.49□□□□□ -0.89
TNFRSF4-202ENST00000453580 Q1RN00 199 aa9.49□□□□□ -0.89
TNFRSF4-202ENST00000453580 XP32Q5T750 250 aa9.49□□□□□ -0.89
TNFRSF4-202ENST00000453580 LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF4-202ENST00000453580 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
TNFRSF4-202ENST00000453580 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
TNFRSF4-202ENST00000453580 S100A6P06703 90 aa9.47□□□□□ -0.89
TNFRSF4-202ENST00000453580 S100A1P23297 94 aa9.47□□□□□ -0.89
TNFRSF4-202ENST00000453580 Q5XG85 94 aa9.45□□□□□ -0.9
TNFRSF4-202ENST00000453580 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
TNFRSF4-202ENST00000453580 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
TNFRSF4-202ENST00000453580 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
TNFRSF4-202ENST00000453580 MUC17Q685J3 4493 aa9.44□□□□□ -0.9
TNFRSF4-202ENST00000453580 F8WEM9 126 aa9.43□□□□□ -0.9
TNFRSF4-202ENST00000453580 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF4-202ENST00000453580 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
TNFRSF4-202ENST00000453580 TCL1BO95988 128 aa9.39□□□□□ -0.91
TNFRSF4-202ENST00000453580 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
TNFRSF4-202ENST00000453580 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
TNFRSF4-202ENST00000453580 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
TNFRSF4-202ENST00000453580 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
TNFRSF4-202ENST00000453580 Q6JHZ5 121 aa9.36□□□□□ -0.91
TNFRSF4-202ENST00000453580 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
TNFRSF4-202ENST00000453580 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
TNFRSF4-202ENST00000453580 SNCGO76070 127 aa9.34□□□□□ -0.91
TNFRSF4-202ENST00000453580 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
TNFRSF4-202ENST00000453580 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
TNFRSF4-202ENST00000453580 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
TNFRSF4-202ENST00000453580 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF4-202ENST00000453580 Q6ZQY7 126 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms