RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 FAM240AA0A1B0GVK7 77 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 LST1O00453 97 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 C9orf116Q5BN46 136 aaPredicted RBP5.6□□□□□ -1.51
COL8A1-203ENST00000452013 Q6ZRP5 223 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 LINC00308Q8TCZ7 52 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
COL8A1-203ENST00000452013 A0A1W2PNN7 141 aa5.59□□□□□ -1.51
COL8A1-203ENST00000452013 TRIAP1O43715 76 aa5.59□□□□□ -1.51
COL8A1-203ENST00000452013 ACYP1P07311 99 aa5.59□□□□□ -1.51
COL8A1-203ENST00000452013 ADAMTSL4-AS1Q5T5F5 129 aa5.59□□□□□ -1.51
COL8A1-203ENST00000452013 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
COL8A1-203ENST00000452013 EIF4EBP3O60516 100 aaPredicted RBP5.58□□□□□ -1.52
COL8A1-203ENST00000452013 TRACP01848 142 aa5.58□□□□□ -1.52
COL8A1-203ENST00000452013 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
COL8A1-203ENST00000452013 Q6Q795 121 aa5.58□□□□□ -1.52
COL8A1-203ENST00000452013 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
COL8A1-203ENST00000452013 H7C2G1 150 aa5.56□□□□□ -1.52
COL8A1-203ENST00000452013 H0YGX0 51 aa5.55□□□□□ -1.52
COL8A1-203ENST00000452013 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
COL8A1-203ENST00000452013 COX17Q14061 63 aa5.55□□□□□ -1.52
COL8A1-203ENST00000452013 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
COL8A1-203ENST00000452013 SNCGO76070 127 aa5.54□□□□□ -1.52
COL8A1-203ENST00000452013 PFN2P35080 140 aa5.54□□□□□ -1.52
COL8A1-203ENST00000452013 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
COL8A1-203ENST00000452013 C9orf129Q5T035 196 aaKnown RBP5.54□□□□□ -1.52
COL8A1-203ENST00000452013 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
COL8A1-203ENST00000452013 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
COL8A1-203ENST00000452013 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
COL8A1-203ENST00000452013 FAT1Q14517 4588 aa5.54□□□□□ -1.52
COL8A1-203ENST00000452013 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
COL8A1-203ENST00000452013 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
COL8A1-203ENST00000452013 A0A1B0GX51 115 aa5.52□□□□□ -1.53
COL8A1-203ENST00000452013 LINC00158P58513 81 aa5.52□□□□□ -1.53
COL8A1-203ENST00000452013 UBE2BP63146 152 aa5.52□□□□□ -1.53
COL8A1-203ENST00000452013 PRR3P79522 188 aaKnown RBP5.52□□□□□ -1.53
COL8A1-203ENST00000452013 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
COL8A1-203ENST00000452013 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
COL8A1-203ENST00000452013 NDUFC2O95298 119 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 OXTP01178 125 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 MT-ATP8P03928 68 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 C1orf137Q5JT78 98 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 SERTAD4-AS1Q5TG53 156 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 DAND5Q8N907 189 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 PSORS1C2Q9UIG4 136 aa5.5□□□□□ -1.53
COL8A1-203ENST00000452013 TEX49A0A1B0GTD5 131 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 KRTAP29-1A8MX34 341 aaPredicted RBP5.49□□□□□ -1.53
COL8A1-203ENST00000452013 J3QL48 77 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 NPC2P61916 151 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 MRPL55Q7Z7F7 128 aaKnown RBP5.49□□□□□ -1.53
COL8A1-203ENST00000452013 MIR7-3HGQ8N6C7 128 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 NKAPP1Q8N9T2 125 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 CLEC2BQ92478 149 aa5.49□□□□□ -1.53
COL8A1-203ENST00000452013 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
COL8A1-203ENST00000452013 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
COL8A1-203ENST00000452013 H3BQ85 93 aa5.48□□□□□ -1.53
COL8A1-203ENST00000452013 DNAL4O96015 105 aa5.48□□□□□ -1.53
COL8A1-203ENST00000452013 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
COL8A1-203ENST00000452013 TRBV7-7A0A0K0K1E9 115 aa5.47□□□□□ -1.53
COL8A1-203ENST00000452013 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
COL8A1-203ENST00000452013 BAALC-AS2P0C853 105 aa5.47□□□□□ -1.53
COL8A1-203ENST00000452013 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
COL8A1-203ENST00000452013 REG3GQ6UW15 175 aa5.46□□□□□ -1.54
COL8A1-203ENST00000452013 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
COL8A1-203ENST00000452013 ANAPC13Q9BS18 74 aa5.46□□□□□ -1.54
COL8A1-203ENST00000452013 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
COL8A1-203ENST00000452013 VPREB1P12018 145 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
COL8A1-203ENST00000452013 IGKV2-28A0A075B6P5 120 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 M0R378 163 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 GHRHP01286 108 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 IGKV2D-28P01615 120 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 LINC00337Q8N6G1 96 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 TMEM126AQ9H061 195 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
COL8A1-203ENST00000452013 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
COL8A1-203ENST00000452013 ZNF861PO60384 105 aa5.43□□□□□ -1.54
COL8A1-203ENST00000452013 BCE1O60756 84 aa5.43□□□□□ -1.54
COL8A1-203ENST00000452013 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
COL8A1-203ENST00000452013 SMIM11BQ8TCY0 68 aa5.43□□□□□ -1.54
COL8A1-203ENST00000452013 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
COL8A1-203ENST00000452013 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
COL8A1-203ENST00000452013 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
COL8A1-203ENST00000452013 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
COL8A1-203ENST00000452013 TMEM256-PLSCR3K7ERE1 68 aa5.41□□□□□ -1.54
COL8A1-203ENST00000452013 H0Y9J4 135 aa5.4□□□□□ -1.54
COL8A1-203ENST00000452013 UBE2AP49459 152 aa5.4□□□□□ -1.54
COL8A1-203ENST00000452013 Q8NDZ9 215 aa5.4□□□□□ -1.54
COL8A1-203ENST00000452013 OR13C6PQ8NH95 151 aa5.4□□□□□ -1.54
COL8A1-203ENST00000452013 FAM218AQ96MZ4 157 aa5.4□□□□□ -1.54
COL8A1-203ENST00000452013 NCR3O14931 201 aa5.38□□□□□ -1.55
COL8A1-203ENST00000452013 PDE6GP18545 87 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms