RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 MIEN1Q9BRT3 115 aa9.51□□□□□ -0.89
PTPRN-209ENST00000451506 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
PTPRN-209ENST00000451506 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
PTPRN-209ENST00000451506 S100A12P80511 92 aa9.5□□□□□ -0.89
PTPRN-209ENST00000451506 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
PTPRN-209ENST00000451506 NCR3O14931 201 aa9.49□□□□□ -0.89
PTPRN-209ENST00000451506 XP32Q5T750 250 aa9.49□□□□□ -0.89
PTPRN-209ENST00000451506 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
PTPRN-209ENST00000451506 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
PTPRN-209ENST00000451506 S100A1P23297 94 aa9.48□□□□□ -0.89
PTPRN-209ENST00000451506 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
PTPRN-209ENST00000451506 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
PTPRN-209ENST00000451506 C20orf202A1L168 122 aa9.47□□□□□ -0.89
PTPRN-209ENST00000451506 AKR1D1P51857 326 aa9.47□□□□□ -0.89
PTPRN-209ENST00000451506 MOBPQ13875 183 aa9.47□□□□□ -0.89
PTPRN-209ENST00000451506 IGLV9-49A0A0B4J1Y8 123 aa9.46□□□□□ -0.9
PTPRN-209ENST00000451506 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
PTPRN-209ENST00000451506 ERC2-IT1O76042 136 aa9.46□□□□□ -0.9
PTPRN-209ENST00000451506 SSBP3-AS1Q7Z2R9 100 aa9.46□□□□□ -0.9
PTPRN-209ENST00000451506 SPANXB1Q9NS25 103 aaPredicted RBP9.46□□□□□ -0.9
PTPRN-209ENST00000451506 SLC25A20O43772 301 aa9.45□□□□□ -0.9
PTPRN-209ENST00000451506 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
PTPRN-209ENST00000451506 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
PTPRN-209ENST00000451506 B5MCH6 92 aa9.44□□□□□ -0.9
PTPRN-209ENST00000451506 NDUFC2O95298 119 aa9.44□□□□□ -0.9
PTPRN-209ENST00000451506 KRTDAPP60985 99 aa9.44□□□□□ -0.9
PTPRN-209ENST00000451506 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
PTPRN-209ENST00000451506 TIMM17BO60830 172 aa9.42□□□□□ -0.9
PTPRN-209ENST00000451506 Q9BRP9 147 aa9.41□□□□□ -0.9
PTPRN-209ENST00000451506 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
PTPRN-209ENST00000451506 ZNF815PA8K554 130 aa9.4□□□□□ -0.9
PTPRN-209ENST00000451506 DDTP30046 118 aa9.4□□□□□ -0.9
PTPRN-209ENST00000451506 MT1HP80294 61 aa9.38□□□□□ -0.91
PTPRN-209ENST00000451506 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
PTPRN-209ENST00000451506 Q6ZRX8 168 aa9.38□□□□□ -0.91
PTPRN-209ENST00000451506 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
PTPRN-209ENST00000451506 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
PTPRN-209ENST00000451506 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
PTPRN-209ENST00000451506 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
PTPRN-209ENST00000451506 LITAFQ99732 161 aa9.36□□□□□ -0.91
PTPRN-209ENST00000451506 S100A2P29034 98 aa9.35□□□□□ -0.91
PTPRN-209ENST00000451506 SNRPEP62304 92 aaKnown RBP9.35□□□□□ -0.91
PTPRN-209ENST00000451506 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
PTPRN-209ENST00000451506 TRAV23DV6A0A075B6W5 121 aa9.34□□□□□ -0.91
PTPRN-209ENST00000451506 NPC2P61916 151 aa9.34□□□□□ -0.91
PTPRN-209ENST00000451506 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
PTPRN-209ENST00000451506 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
PTPRN-209ENST00000451506 SCGB1D4Q6XE38 83 aa9.33□□□□□ -0.92
PTPRN-209ENST00000451506 S100A6P06703 90 aa9.32□□□□□ -0.92
PTPRN-209ENST00000451506 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
PTPRN-209ENST00000451506 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
PTPRN-209ENST00000451506 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
PTPRN-209ENST00000451506 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
PTPRN-209ENST00000451506 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
PTPRN-209ENST00000451506 ZNF73O43830 326 aaPredicted RBP9.3□□□□□ -0.92
PTPRN-209ENST00000451506 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
PTPRN-209ENST00000451506 ANKRD39Q53RE8 183 aa9.3□□□□□ -0.92
PTPRN-209ENST00000451506 Q6ZVH6 145 aa9.3□□□□□ -0.92
PTPRN-209ENST00000451506 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
PTPRN-209ENST00000451506 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
PTPRN-209ENST00000451506 TTTY13Q9BZ97 58 aa9.3□□□□□ -0.92
PTPRN-209ENST00000451506 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
PTPRN-209ENST00000451506 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
PTPRN-209ENST00000451506 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
PTPRN-209ENST00000451506 IFITM1P13164 125 aa9.28□□□□□ -0.92
PTPRN-209ENST00000451506 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
PTPRN-209ENST00000451506 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
PTPRN-209ENST00000451506 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
PTPRN-209ENST00000451506 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
PTPRN-209ENST00000451506 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
PTPRN-209ENST00000451506 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
PTPRN-209ENST00000451506 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
PTPRN-209ENST00000451506 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
PTPRN-209ENST00000451506 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
PTPRN-209ENST00000451506 SPRR1BP22528 89 aa9.22□□□□□ -0.93
PTPRN-209ENST00000451506 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
PTPRN-209ENST00000451506 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
PTPRN-209ENST00000451506 TRBV7-6A0A0J9YX20 115 aa9.18□□□□□ -0.94
PTPRN-209ENST00000451506 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
PTPRN-209ENST00000451506 COX7BP24311 80 aa9.17□□□□□ -0.94
PTPRN-209ENST00000451506 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
PTPRN-209ENST00000451506 SLC25A34Q6PIV7 304 aa9.17□□□□□ -0.94
PTPRN-209ENST00000451506 TRAV13-2A0A0B4J235 113 aa9.16□□□□□ -0.94
PTPRN-209ENST00000451506 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
PTPRN-209ENST00000451506 A6NDN8 102 aa9.15□□□□□ -0.94
PTPRN-209ENST00000451506 SCGB1D1O95968 90 aa9.15□□□□□ -0.94
PTPRN-209ENST00000451506 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
PTPRN-209ENST00000451506 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
PTPRN-209ENST00000451506 A4D1N5 150 aa9.13□□□□□ -0.95
PTPRN-209ENST00000451506 CD164Q04900 197 aa9.13□□□□□ -0.95
PTPRN-209ENST00000451506 M0R2T5 61 aa9.12□□□□□ -0.95
PTPRN-209ENST00000451506 Q5XG85 94 aa9.1□□□□□ -0.95
PTPRN-209ENST00000451506 NHP2Q9NX24 153 aaKnown RBP9.1□□□□□ -0.95
PTPRN-209ENST00000451506 COX8AP10176 69 aa9.09□□□□□ -0.95
PTPRN-209ENST00000451506 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
PTPRN-209ENST00000451506 FLGP20930 4061 aaPredicted RBP9.09□□□□□ -0.95
PTPRN-209ENST00000451506 H7C2G1 150 aa9.08□□□□□ -0.96
PTPRN-209ENST00000451506 Q1RN00 199 aa9.08□□□□□ -0.96
PTPRN-209ENST00000451506 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
PTPRN-209ENST00000451506 PRO1933Q9H354 126 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms