RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 Q8NBF4 154 aa5.58□□□□□ -1.52
USP54-207ENST00000451492 OR13C6PQ8NH95 151 aa5.58□□□□□ -1.52
USP54-207ENST00000451492 Q9BRP9 147 aa5.58□□□□□ -1.52
USP54-207ENST00000451492 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
USP54-207ENST00000451492 MOBPQ13875 183 aa5.57□□□□□ -1.52
USP54-207ENST00000451492 C4orf48Q5BLP8 95 aa5.57□□□□□ -1.52
USP54-207ENST00000451492 Q6ZRX8 168 aa5.57□□□□□ -1.52
USP54-207ENST00000451492 LINC00308Q8TCZ7 52 aa5.57□□□□□ -1.52
USP54-207ENST00000451492 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
USP54-207ENST00000451492 LITAFQ99732 161 aa5.56□□□□□ -1.52
USP54-207ENST00000451492 SPANXCQ9NY87 97 aa5.56□□□□□ -1.52
USP54-207ENST00000451492 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
USP54-207ENST00000451492 C20orf202A1L168 122 aa5.55□□□□□ -1.52
USP54-207ENST00000451492 C9orf153Q5TBE3 101 aa5.55□□□□□ -1.52
USP54-207ENST00000451492 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
USP54-207ENST00000451492 MUC2Q02817 5179 aa5.54□□□□□ -1.52
USP54-207ENST00000451492 JOSD1Q15040 202 aaPredicted RBP5.54□□□□□ -1.52
USP54-207ENST00000451492 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
USP54-207ENST00000451492 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
USP54-207ENST00000451492 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
USP54-207ENST00000451492 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
USP54-207ENST00000451492 TIMM17BO60830 172 aa5.53□□□□□ -1.52
USP54-207ENST00000451492 HINT1P49773 126 aaPredicted RBP5.53□□□□□ -1.52
USP54-207ENST00000451492 COA6Q5JTJ3 125 aaKnown RBP5.53□□□□□ -1.52
USP54-207ENST00000451492 SPAG11AQ6PDA7 123 aa5.53□□□□□ -1.52
USP54-207ENST00000451492 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
USP54-207ENST00000451492 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
USP54-207ENST00000451492 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
USP54-207ENST00000451492 CBY1Q9Y3M2 126 aa5.5□□□□□ -1.53
USP54-207ENST00000451492 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
USP54-207ENST00000451492 SPINK1P00995 79 aa5.49□□□□□ -1.53
USP54-207ENST00000451492 COX7BP24311 80 aa5.49□□□□□ -1.53
USP54-207ENST00000451492 C6orf99Q4VX62 202 aa5.49□□□□□ -1.53
USP54-207ENST00000451492 A6NDN8 102 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 S100A2P29034 98 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 CTAG1AP78358 180 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 HRCT1Q6UXD1 115 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 LINC00518Q8N0U6 118 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 HIST3H2BBQ8N257 126 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 DEFB105AQ8NG35 78 aa5.48□□□□□ -1.53
USP54-207ENST00000451492 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
USP54-207ENST00000451492 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
USP54-207ENST00000451492 DHRS4-AS1Q9P1J3 65 aa5.47□□□□□ -1.53
USP54-207ENST00000451492 Q1RN00 199 aa5.46□□□□□ -1.54
USP54-207ENST00000451492 FP248Q71RG6 208 aaPredicted RBP5.46□□□□□ -1.54
USP54-207ENST00000451492 Q8N377 158 aa5.46□□□□□ -1.54
USP54-207ENST00000451492 COPS9Q8WXC6 57 aa5.46□□□□□ -1.54
USP54-207ENST00000451492 HIST1H2BLQ99880 126 aa5.46□□□□□ -1.54
USP54-207ENST00000451492 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
USP54-207ENST00000451492 S100A6P06703 90 aa5.45□□□□□ -1.54
USP54-207ENST00000451492 IFITM1P13164 125 aa5.45□□□□□ -1.54
USP54-207ENST00000451492 TAL2Q16559 108 aa5.45□□□□□ -1.54
USP54-207ENST00000451492 HSBP1L1C9JCN9 74 aa5.44□□□□□ -1.54
USP54-207ENST00000451492 S100A1P23297 94 aa5.44□□□□□ -1.54
USP54-207ENST00000451492 AKR1D1P51857 326 aa5.44□□□□□ -1.54
USP54-207ENST00000451492 LAMTOR3Q9UHA4 124 aa5.44□□□□□ -1.54
USP54-207ENST00000451492 SLC25A20O43772 301 aa5.43□□□□□ -1.54
USP54-207ENST00000451492 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
USP54-207ENST00000451492 SLC25A34Q6PIV7 304 aa5.43□□□□□ -1.54
USP54-207ENST00000451492 A0A1B0GWB2 263 aa5.42□□□□□ -1.54
USP54-207ENST00000451492 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
USP54-207ENST00000451492 SPRR1BP22528 89 aa5.42□□□□□ -1.54
USP54-207ENST00000451492 RPS29P62273 56 aaKnown RBP5.42□□□□□ -1.54
USP54-207ENST00000451492 Q6ZVH6 145 aa5.42□□□□□ -1.54
USP54-207ENST00000451492 TRAV13-2A0A0B4J235 113 aa5.41□□□□□ -1.54
USP54-207ENST00000451492 H7C2G1 150 aa5.41□□□□□ -1.54
USP54-207ENST00000451492 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
USP54-207ENST00000451492 SNRPEP62304 92 aaKnown RBP5.41□□□□□ -1.54
USP54-207ENST00000451492 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
USP54-207ENST00000451492 C12orf57Q99622 126 aa5.41□□□□□ -1.54
USP54-207ENST00000451492 A0A0G2JQZ4 141 aa5.4□□□□□ -1.54
USP54-207ENST00000451492 TEX49A0A1B0GTD5 131 aa5.4□□□□□ -1.54
USP54-207ENST00000451492 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
USP54-207ENST00000451492 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
USP54-207ENST00000451492 A4D1N5 150 aa5.39□□□□□ -1.55
USP54-207ENST00000451492 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
USP54-207ENST00000451492 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
USP54-207ENST00000451492 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
USP54-207ENST00000451492 SMIM29Q86T20 159 aa5.37□□□□□ -1.55
USP54-207ENST00000451492 HIST1H4GQ99525 98 aa5.37□□□□□ -1.55
USP54-207ENST00000451492 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
USP54-207ENST00000451492 NHP2Q9NX24 153 aaKnown RBP5.37□□□□□ -1.55
USP54-207ENST00000451492 XP32Q5T750 250 aa5.36□□□□□ -1.55
USP54-207ENST00000451492 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
USP54-207ENST00000451492 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
USP54-207ENST00000451492 VAMP3Q15836 100 aa5.35□□□□□ -1.55
USP54-207ENST00000451492 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
USP54-207ENST00000451492 Q6ZQY7 126 aa5.34□□□□□ -1.55
USP54-207ENST00000451492 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.55
USP54-207ENST00000451492 hADV29S1A0JD25 119 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 F8WEM9 126 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 COX8AP10176 69 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 C14orf144Q96I85 54 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
USP54-207ENST00000451492 CD164Q04900 197 aa5.32□□□□□ -1.56
USP54-207ENST00000451492 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
USP54-207ENST00000451492 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
USP54-207ENST00000451492 RAB37Q96AX2 223 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms