RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 NBPF19A0A087WUL8 3843 aa7.51□□□□□ -1.21
RFX3-208ENST00000449234 J3KT08 172 aa7.51□□□□□ -1.21
RFX3-208ENST00000449234 HAMPP81172 84 aa7.51□□□□□ -1.21
RFX3-208ENST00000449234 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
RFX3-208ENST00000449234 GCN1Q92616 2671 aaKnown RBP7.5□□□□□ -1.21
RFX3-208ENST00000449234 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
RFX3-208ENST00000449234 IGLV5-48A0A075B6I7 105 aa7.49□□□□□ -1.21
RFX3-208ENST00000449234 SPRR1AP35321 89 aa7.49□□□□□ -1.21
RFX3-208ENST00000449234 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
RFX3-208ENST00000449234 NSD1Q96L73 2696 aaPredicted RBP7.49□□□□□ -1.21
RFX3-208ENST00000449234 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
RFX3-208ENST00000449234 M0R2N4 97 aa7.48□□□□□ -1.21
RFX3-208ENST00000449234 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
RFX3-208ENST00000449234 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
RFX3-208ENST00000449234 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
RFX3-208ENST00000449234 TEP1Q99973 2627 aaKnown RBP7.47□□□□□ -1.21
RFX3-208ENST00000449234 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.22
RFX3-208ENST00000449234 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
RFX3-208ENST00000449234 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
RFX3-208ENST00000449234 NREPQ16612 68 aa7.45□□□□□ -1.22
RFX3-208ENST00000449234 Q6ZRX8 168 aa7.45□□□□□ -1.22
RFX3-208ENST00000449234 Q8N377 158 aa7.45□□□□□ -1.22
RFX3-208ENST00000449234 DPH3Q96FX2 82 aa7.45□□□□□ -1.22
RFX3-208ENST00000449234 CUBNO60494 3623 aa7.45□□□□□ -1.22
RFX3-208ENST00000449234 VWFP04275 2813 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 OTOGQ6ZRI0 2925 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 NDUFC1O43677 76 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 KLKP1Q107X0 134 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
RFX3-208ENST00000449234 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
RFX3-208ENST00000449234 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
RFX3-208ENST00000449234 FUSP35637 526 aaKnown RBP eCLIP7.41□□□□□ -1.22
RFX3-208ENST00000449234 MRPL55Q7Z7F7 128 aaKnown RBP7.4□□□□□ -1.22
RFX3-208ENST00000449234 C20orf197Q8N268 126 aa7.4□□□□□ -1.22
RFX3-208ENST00000449234 PKIGQ9Y2B9 76 aa7.4□□□□□ -1.22
RFX3-208ENST00000449234 HIVEP1P15822 2718 aa7.39□□□□□ -1.23
RFX3-208ENST00000449234 BPY2O14599 106 aa7.39□□□□□ -1.23
RFX3-208ENST00000449234 TENM1Q9UKZ4 2725 aa7.39□□□□□ -1.23
RFX3-208ENST00000449234 ATRQ13535 2644 aa7.38□□□□□ -1.23
RFX3-208ENST00000449234 ATP5EP56381 51 aaPredicted RBP7.38□□□□□ -1.23
RFX3-208ENST00000449234 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
RFX3-208ENST00000449234 SPRR4Q96PI1 79 aa7.38□□□□□ -1.23
RFX3-208ENST00000449234 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
RFX3-208ENST00000449234 RPL37AP8A6NKH3 93 aa7.37□□□□□ -1.23
RFX3-208ENST00000449234 IGKV4-1P06312 121 aa7.37□□□□□ -1.23
RFX3-208ENST00000449234 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
RFX3-208ENST00000449234 Q8NBF4 154 aa7.37□□□□□ -1.23
RFX3-208ENST00000449234 Q9BRP9 147 aa7.37□□□□□ -1.23
RFX3-208ENST00000449234 K7EIL1 84 aa7.36□□□□□ -1.23
RFX3-208ENST00000449234 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
RFX3-208ENST00000449234 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
RFX3-208ENST00000449234 DEFB105AQ8NG35 78 aa7.36□□□□□ -1.23
RFX3-208ENST00000449234 HECTD1Q9ULT8 2610 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 FAM236DA0A1B0GTK5 79 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 EPM2AB3EWF7 344 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 H7BZZ5 65 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 FAM236CP0DP71 79 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
RFX3-208ENST00000449234 SERP1Q9Y6X1 66 aa7.35□□□□□ -1.23
RFX3-208ENST00000449234 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
RFX3-208ENST00000449234 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
RFX3-208ENST00000449234 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
RFX3-208ENST00000449234 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
RFX3-208ENST00000449234 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
RFX3-208ENST00000449234 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
RFX3-208ENST00000449234 H0Y9J4 135 aa7.32□□□□□ -1.24
RFX3-208ENST00000449234 UBE2BP63146 152 aa7.32□□□□□ -1.24
RFX3-208ENST00000449234 SCXQ7RTU7 201 aa7.32□□□□□ -1.24
RFX3-208ENST00000449234 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
RFX3-208ENST00000449234 F8WEM9 126 aa7.31□□□□□ -1.24
RFX3-208ENST00000449234 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
RFX3-208ENST00000449234 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
RFX3-208ENST00000449234 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
RFX3-208ENST00000449234 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
RFX3-208ENST00000449234 SPRR1BP22528 89 aa7.28□□□□□ -1.24
RFX3-208ENST00000449234 ST20-AS1Q8NBB2 130 aa7.28□□□□□ -1.24
RFX3-208ENST00000449234 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
RFX3-208ENST00000449234 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.25
RFX3-208ENST00000449234 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
RFX3-208ENST00000449234 LCE6AA0A183 80 aa7.27□□□□□ -1.25
RFX3-208ENST00000449234 PSCAO43653 123 aa7.26□□□□□ -1.25
RFX3-208ENST00000449234 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
RFX3-208ENST00000449234 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
RFX3-208ENST00000449234 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
RFX3-208ENST00000449234 A0A096LNI7 61 aa7.25□□□□□ -1.25
RFX3-208ENST00000449234 SMIM26A0A096LP01 95 aa7.24□□□□□ -1.25
RFX3-208ENST00000449234 UBE2DNLQ8IWF7 75 aa7.24□□□□□ -1.25
RFX3-208ENST00000449234 LINC00476Q8WZB0 136 aa7.24□□□□□ -1.25
RFX3-208ENST00000449234 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
RFX3-208ENST00000449234 A0A1W2PNN7 141 aa7.23□□□□□ -1.25
RFX3-208ENST00000449234 OXTP01178 125 aa7.23□□□□□ -1.25
RFX3-208ENST00000449234 DSCR10P59022 87 aa7.23□□□□□ -1.25
RFX3-208ENST00000449234 C9orf163Q8N9P6 203 aa7.23□□□□□ -1.25
RFX3-208ENST00000449234 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
RFX3-208ENST00000449234 Q8N9L7 120 aa7.22□□□□□ -1.25
RFX3-208ENST00000449234 PRB2P02812 416 aaPredicted RBP7.21□□□□□ -1.26
RFX3-208ENST00000449234 B9D2Q9BPU9 175 aa7.21□□□□□ -1.26
RFX3-208ENST00000449234 F8P00451 2351 aa7.21□□□□□ -1.26
RFX3-208ENST00000449234 KRTAP1-5Q9BYS1 174 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms