RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
KLHL3-202ENST00000447439 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
KLHL3-202ENST00000447439 Q8N9L7 120 aa6.16□□□□□ -1.42
KLHL3-202ENST00000447439 PDE6GP18545 87 aa6.15□□□□□ -1.42
KLHL3-202ENST00000447439 C7orf33Q8WU49 177 aa6.15□□□□□ -1.43
KLHL3-202ENST00000447439 LINC00588Q9Y4M8 146 aa6.15□□□□□ -1.43
KLHL3-202ENST00000447439 F8WDY8 70 aa6.14□□□□□ -1.43
KLHL3-202ENST00000447439 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
KLHL3-202ENST00000447439 LYSTQ99698 3801 aa6.14□□□□□ -1.43
KLHL3-202ENST00000447439 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
KLHL3-202ENST00000447439 C3orf84H3BNL1 204 aa6.13□□□□□ -1.43
KLHL3-202ENST00000447439 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
KLHL3-202ENST00000447439 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
KLHL3-202ENST00000447439 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
KLHL3-202ENST00000447439 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
KLHL3-202ENST00000447439 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
KLHL3-202ENST00000447439 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
KLHL3-202ENST00000447439 DNAH10OSP0CZ25 163 aa6.11□□□□□ -1.43
KLHL3-202ENST00000447439 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 TMEM258P61165 79 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 Q8N377 158 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 BCE1O60756 84 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
KLHL3-202ENST00000447439 DNAH3Q8TD57 4116 aa6.09□□□□□ -1.43
KLHL3-202ENST00000447439 BPY2O14599 106 aa6.09□□□□□ -1.43
KLHL3-202ENST00000447439 OXTP01178 125 aa6.09□□□□□ -1.43
KLHL3-202ENST00000447439 CXCL6P80162 114 aa6.09□□□□□ -1.43
KLHL3-202ENST00000447439 Q9BRP9 147 aa6.09□□□□□ -1.43
KLHL3-202ENST00000447439 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
KLHL3-202ENST00000447439 A0A0G2JQZ4 141 aa6.09□□□□□ -1.44
KLHL3-202ENST00000447439 A0A1W2PNN7 141 aa6.09□□□□□ -1.44
KLHL3-202ENST00000447439 KCNQ1DNQ9H478 68 aa6.09□□□□□ -1.44
KLHL3-202ENST00000447439 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
KLHL3-202ENST00000447439 J3KT08 172 aa6.08□□□□□ -1.44
KLHL3-202ENST00000447439 ERC2-IT1O76042 136 aa6.08□□□□□ -1.44
KLHL3-202ENST00000447439 TM2D3Q9BRN9 247 aa6.08□□□□□ -1.44
KLHL3-202ENST00000447439 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
KLHL3-202ENST00000447439 K7EIL1 84 aa6.07□□□□□ -1.44
KLHL3-202ENST00000447439 RMI2Q96E14 147 aa6.07□□□□□ -1.44
KLHL3-202ENST00000447439 RPS28P62857 69 aaKnown RBP6.06□□□□□ -1.44
KLHL3-202ENST00000447439 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 IGKV2-24A0A0C4DH68 120 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 ETDCA0A1B0GVM5 59 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 Q6ZRX8 168 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 NREPQ16612 68 aa6.05□□□□□ -1.44
KLHL3-202ENST00000447439 TRAV7A0A075B6U4 112 aa6.04□□□□□ -1.44
KLHL3-202ENST00000447439 MGAM2Q2M2H8 2515 aa6.04□□□□□ -1.44
KLHL3-202ENST00000447439 UBE2BP63146 152 aa6.04□□□□□ -1.44
KLHL3-202ENST00000447439 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
KLHL3-202ENST00000447439 TLX1NBP0CAT3 122 aa6.03□□□□□ -1.44
KLHL3-202ENST00000447439 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.03□□□□□ -1.44
KLHL3-202ENST00000447439 A0A1W2PNM2 257 aa6.03□□□□□ -1.44
KLHL3-202ENST00000447439 MRPL55Q7Z7F7 128 aaKnown RBP6.03□□□□□ -1.44
KLHL3-202ENST00000447439 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
KLHL3-202ENST00000447439 IGKV4-1P06312 121 aa6.02□□□□□ -1.44
KLHL3-202ENST00000447439 COL7A1Q02388 2944 aa6.02□□□□□ -1.45
KLHL3-202ENST00000447439 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
KLHL3-202ENST00000447439 H7BZZ5 65 aa6.02□□□□□ -1.45
KLHL3-202ENST00000447439 PRLHP81277 87 aa6.02□□□□□ -1.45
KLHL3-202ENST00000447439 C1orf137Q5JT78 98 aa6.01□□□□□ -1.45
KLHL3-202ENST00000447439 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
KLHL3-202ENST00000447439 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
KLHL3-202ENST00000447439 A0A096LNI7 61 aa6.01□□□□□ -1.45
KLHL3-202ENST00000447439 F8WEM9 126 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 PRYO14603 147 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 TENM2Q9NT68 2774 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 CHTF8P0CG12 524 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 SPRR1AP35321 89 aa6□□□□□ -1.45
KLHL3-202ENST00000447439 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
KLHL3-202ENST00000447439 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
KLHL3-202ENST00000447439 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
KLHL3-202ENST00000447439 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
KLHL3-202ENST00000447439 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
KLHL3-202ENST00000447439 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 PSCAO43653 123 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 FUSP35637 526 aaKnown RBP eCLIP5.98□□□□□ -1.45
KLHL3-202ENST00000447439 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 LCE2DQ5TA82 110 aaPredicted RBP5.98□□□□□ -1.45
KLHL3-202ENST00000447439 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 FAM30AQ9NZY2 134 aa5.98□□□□□ -1.45
KLHL3-202ENST00000447439 TNP2Q05952 138 aa5.97□□□□□ -1.45
KLHL3-202ENST00000447439 HIGD2AQ9BW72 106 aa5.97□□□□□ -1.45
KLHL3-202ENST00000447439 A0A1B0GW54 56 aa5.97□□□□□ -1.45
KLHL3-202ENST00000447439 SEC61GP60059 68 aa5.97□□□□□ -1.45
KLHL3-202ENST00000447439 HRCT1Q6UXD1 115 aa5.97□□□□□ -1.45
KLHL3-202ENST00000447439 SMIM29Q86T20 159 aa5.96□□□□□ -1.45
KLHL3-202ENST00000447439 UBE2DNLQ8IWF7 75 aa5.96□□□□□ -1.46
KLHL3-202ENST00000447439 Q8NBF4 154 aa5.95□□□□□ -1.46
KLHL3-202ENST00000447439 LINC00476Q8WZB0 136 aa5.95□□□□□ -1.46
KLHL3-202ENST00000447439 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
KLHL3-202ENST00000447439 TMEM254Q8TBM7 123 aa5.95□□□□□ -1.46
KLHL3-202ENST00000447439 K7EQZ3 153 aa5.94□□□□□ -1.46
KLHL3-202ENST00000447439 Q5XG85 94 aa5.93□□□□□ -1.46
KLHL3-202ENST00000447439 OCR1Q9BZK8 76 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms