RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
SDCBP-204ENST00000447182 BPY2O14599 106 aa12.46□□□□□ -0.41
SDCBP-204ENST00000447182 NKAPP1Q8N9T2 125 aa12.46□□□□□ -0.41
SDCBP-204ENST00000447182 ERC2-IT1O76042 136 aa12.46□□□□□ -0.42
SDCBP-204ENST00000447182 NREPQ16612 68 aa12.46□□□□□ -0.42
SDCBP-204ENST00000447182 C4orf26Q17RF5 130 aa12.46□□□□□ -0.42
SDCBP-204ENST00000447182 IGKV4-1P06312 121 aa12.45□□□□□ -0.42
SDCBP-204ENST00000447182 IGLV5-48A0A075B6I7 105 aa12.44□□□□□ -0.42
SDCBP-204ENST00000447182 F8WEM9 126 aa12.44□□□□□ -0.42
SDCBP-204ENST00000447182 Q8N377 158 aa12.44□□□□□ -0.42
SDCBP-204ENST00000447182 C7orf33Q8WU49 177 aa12.44□□□□□ -0.42
SDCBP-204ENST00000447182 SERTAD4-AS1Q5TG53 156 aa12.44□□□□□ -0.42
SDCBP-204ENST00000447182 TLX1NBP0CAT3 122 aa12.43□□□□□ -0.42
SDCBP-204ENST00000447182 PLA2G2DQ9UNK4 145 aa12.43□□□□□ -0.42
SDCBP-204ENST00000447182 KRTAP10-11P60412 298 aa12.42□□□□□ -0.42
SDCBP-204ENST00000447182 KMT2BQ9UMN6 2715 aaPredicted RBP12.41□□□□□ -0.42
SDCBP-204ENST00000447182 A0A1B0GW54 56 aa12.41□□□□□ -0.42
SDCBP-204ENST00000447182 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
SDCBP-204ENST00000447182 Q8N9L7 120 aa12.4□□□□□ -0.42
SDCBP-204ENST00000447182 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
SDCBP-204ENST00000447182 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.43
SDCBP-204ENST00000447182 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
SDCBP-204ENST00000447182 ATP5EP56381 51 aaPredicted RBP12.39□□□□□ -0.43
SDCBP-204ENST00000447182 TMEM254Q8TBM7 123 aa12.39□□□□□ -0.43
SDCBP-204ENST00000447182 Q6ZRX8 168 aa12.38□□□□□ -0.43
SDCBP-204ENST00000447182 KRTAP4-16G5E9R7 235 aaPredicted RBP12.38□□□□□ -0.43
SDCBP-204ENST00000447182 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
SDCBP-204ENST00000447182 DEFB105AQ8NG35 78 aa12.38□□□□□ -0.43
SDCBP-204ENST00000447182 OCR1Q9BZK8 76 aa12.38□□□□□ -0.43
SDCBP-204ENST00000447182 PKD1L1Q8TDX9 2849 aa12.37□□□□□ -0.43
SDCBP-204ENST00000447182 IGLV5-37A0A075B6J1 123 aa12.37□□□□□ -0.43
SDCBP-204ENST00000447182 HRCT1Q6UXD1 115 aa12.37□□□□□ -0.43
SDCBP-204ENST00000447182 HECTD1Q9ULT8 2610 aa12.37□□□□□ -0.43
SDCBP-204ENST00000447182 PRYO14603 147 aa12.36□□□□□ -0.43
SDCBP-204ENST00000447182 SPRR1AP35321 89 aa12.35□□□□□ -0.43
SDCBP-204ENST00000447182 Q9BRP9 147 aa12.35□□□□□ -0.43
SDCBP-204ENST00000447182 IGLV1-50A0A075B6I6 118 aa12.34□□□□□ -0.43
SDCBP-204ENST00000447182 FUSP35637 526 aaKnown RBP eCLIP12.34□□□□□ -0.43
SDCBP-204ENST00000447182 TNP2Q05952 138 aa12.34□□□□□ -0.43
SDCBP-204ENST00000447182 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
SDCBP-204ENST00000447182 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
SDCBP-204ENST00000447182 SMIM26A0A096LP01 95 aa12.31□□□□□ -0.44
SDCBP-204ENST00000447182 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
SDCBP-204ENST00000447182 A0A1W2PNM2 257 aa12.31□□□□□ -0.44
SDCBP-204ENST00000447182 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
SDCBP-204ENST00000447182 ANK2Q01484 3957 aa12.31□□□□□ -0.44
SDCBP-204ENST00000447182 ETDCA0A1B0GVM5 59 aa12.3□□□□□ -0.44
SDCBP-204ENST00000447182 TENM3Q9P273 2699 aa12.29□□□□□ -0.44
SDCBP-204ENST00000447182 FAM168BA1KXE4 195 aa12.29□□□□□ -0.44
SDCBP-204ENST00000447182 C1orf137Q5JT78 98 aa12.29□□□□□ -0.44
SDCBP-204ENST00000447182 Q8NBF4 154 aa12.28□□□□□ -0.44
SDCBP-204ENST00000447182 KRTAP7-1Q8IUC3 87 aa12.28□□□□□ -0.44
SDCBP-204ENST00000447182 SPRR4Q96PI1 79 aa12.27□□□□□ -0.45
SDCBP-204ENST00000447182 FP248Q71RG6 208 aaPredicted RBP12.26□□□□□ -0.45
SDCBP-204ENST00000447182 ST20-AS1Q8NBB2 130 aa12.25□□□□□ -0.45
SDCBP-204ENST00000447182 CASC10Q5T4H9 136 aa12.23□□□□□ -0.45
SDCBP-204ENST00000447182 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
SDCBP-204ENST00000447182 LINC00588Q9Y4M8 146 aa12.23□□□□□ -0.45
SDCBP-204ENST00000447182 SMIM29Q86T20 159 aa12.22□□□□□ -0.45
SDCBP-204ENST00000447182 LCE6AA0A183 80 aa12.21□□□□□ -0.45
SDCBP-204ENST00000447182 DNAH1Q9P2D7 4330 aa12.2□□□□□ -0.46
SDCBP-204ENST00000447182 CMYA5Q8N3K9 4069 aa12.19□□□□□ -0.46
SDCBP-204ENST00000447182 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
SDCBP-204ENST00000447182 DSCR10P59022 87 aa12.17□□□□□ -0.46
SDCBP-204ENST00000447182 UBE2BP63146 152 aa12.17□□□□□ -0.46
SDCBP-204ENST00000447182 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
SDCBP-204ENST00000447182 REG3GQ6UW15 175 aa12.16□□□□□ -0.46
SDCBP-204ENST00000447182 FAM30AQ9NZY2 134 aa12.16□□□□□ -0.46
SDCBP-204ENST00000447182 LINC00474Q9P2X8 69 aa12.15□□□□□ -0.46
SDCBP-204ENST00000447182 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
SDCBP-204ENST00000447182 K7EQZ3 153 aa12.11□□□□□ -0.47
SDCBP-204ENST00000447182 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
SDCBP-204ENST00000447182 KRTAP24-1Q3LI83 254 aa12.1□□□□□ -0.47
SDCBP-204ENST00000447182 FAM229BQ4G0N7 80 aa12.09□□□□□ -0.47
SDCBP-204ENST00000447182 PRO0628Q9UI54 55 aa12.09□□□□□ -0.47
SDCBP-204ENST00000447182 ZCCHC13Q8WW36 166 aaKnown RBP12.08□□□□□ -0.47
SDCBP-204ENST00000447182 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
SDCBP-204ENST00000447182 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
SDCBP-204ENST00000447182 IGFL1Q6UW32 110 aa12.06□□□□□ -0.48
SDCBP-204ENST00000447182 HCG22E2RYF7 251 aa12.05□□□□□ -0.48
SDCBP-204ENST00000447182 PSCAO43653 123 aa12.04□□□□□ -0.48
SDCBP-204ENST00000447182 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
SDCBP-204ENST00000447182 STAB1Q9NY15 2570 aa12.02□□□□□ -0.49
SDCBP-204ENST00000447182 A0A096LNI7 61 aa12.01□□□□□ -0.49
SDCBP-204ENST00000447182 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
SDCBP-204ENST00000447182 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
SDCBP-204ENST00000447182 hDV103S1A0JD37 113 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 MAST4O15021 2626 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 A0A0G2JQZ4 141 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 PRLHP81277 87 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 F8P00451 2351 aa11.99□□□□□ -0.49
SDCBP-204ENST00000447182 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
SDCBP-204ENST00000447182 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.49
SDCBP-204ENST00000447182 HUWE1Q7Z6Z7 4374 aaKnown RBP11.96□□□□□ -0.5
SDCBP-204ENST00000447182 NOTCH1P46531 2555 aa11.95□□□□□ -0.5
SDCBP-204ENST00000447182 A0A087WSZ3 146 aa11.95□□□□□ -0.5
SDCBP-204ENST00000447182 IGKV2-24A0A0C4DH68 120 aa11.95□□□□□ -0.5
SDCBP-204ENST00000447182 KRTAP1-5Q9BYS1 174 aa11.93□□□□□ -0.5
SDCBP-204ENST00000447182 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms