RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 C18orf32Q8TCD1 76 aa1.25□□□□□ -2.21
LINC00440-201ENST00000446579 F5P12259 2224 aa1.25□□□□□ -2.21
LINC00440-201ENST00000446579 COL4A6Q14031 1691 aa1.25□□□□□ -2.21
LINC00440-201ENST00000446579 SRCAPQ6ZRS2 3230 aa1.25□□□□□ -2.21
LINC00440-201ENST00000446579 ZDBF2Q9HCK1 2354 aa1.24□□□□□ -2.21
LINC00440-201ENST00000446579 IQCF6A8MYZ5 107 aa1.24□□□□□ -2.21
LINC00440-201ENST00000446579 PRCDQ00LT1 54 aa1.24□□□□□ -2.21
LINC00440-201ENST00000446579 PDCD11Q14690 1871 aaKnown RBP1.24□□□□□ -2.21
LINC00440-201ENST00000446579 PLXNB2O15031 1838 aa1.24□□□□□ -2.21
LINC00440-201ENST00000446579 KNTC1P50748 2209 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 A0A1B0GUT8 65 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 LINC01549A6NIU2 74 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 DEFB108AA8MXU0 73 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 H3BUT2 72 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 PLNP26678 52 aa1.23□□□□□ -2.21
LINC00440-201ENST00000446579 TIMM8BQ9Y5J9 83 aaPredicted RBP1.23□□□□□ -2.21
LINC00440-201ENST00000446579 MYMXA0A1B0GTQ4 84 aa1.22□□□□□ -2.21
LINC00440-201ENST00000446579 A0A1B0GU69 56 aa1.22□□□□□ -2.21
LINC00440-201ENST00000446579 K7EMI3 77 aa1.22□□□□□ -2.21
LINC00440-201ENST00000446579 FCER1GP30273 86 aa1.22□□□□□ -2.21
LINC00440-201ENST00000446579 CNFNQ9BYD5 112 aa1.22□□□□□ -2.21
LINC00440-201ENST00000446579 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.21
LINC00440-201ENST00000446579 EP400Q96L91 3159 aa1.21□□□□□ -2.22
LINC00440-201ENST00000446579 IFI27P40305 119 aaPredicted RBP1.21□□□□□ -2.22
LINC00440-201ENST00000446579 RPL39P5Q59GN2 51 aa1.21□□□□□ -2.22
LINC00440-201ENST00000446579 TMEM167AQ8TBQ9 72 aa1.21□□□□□ -2.22
LINC00440-201ENST00000446579 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
LINC00440-201ENST00000446579 HILPDAQ9Y5L2 63 aa1.21□□□□□ -2.22
LINC00440-201ENST00000446579 LINC01546A6NGU7 62 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 H3BVH4 76 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 NDUFA3O95167 84 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 ATXN8Q156A1 80 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 LEAP2Q969E1 77 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 PCNTO95613 3336 aa1.2□□□□□ -2.22
LINC00440-201ENST00000446579 TRBV7-4A0A0J9YYF1 115 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 WT1-ASQ06250 92 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 DEFB108BQ8NET1 73 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 GAFA1Q96PS6 74 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 PRO0255Q9UI72 69 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 UTRNP46939 3433 aa1.19□□□□□ -2.22
LINC00440-201ENST00000446579 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
LINC00440-201ENST00000446579 TRAV21A0A0B4J279 112 aa1.18□□□□□ -2.22
LINC00440-201ENST00000446579 I3L2K1 104 aa1.18□□□□□ -2.22
LINC00440-201ENST00000446579 SMIM2Q9BVW6 85 aa1.18□□□□□ -2.22
LINC00440-201ENST00000446579 U3KQA8 63 aa1.18□□□□□ -2.22
LINC00440-201ENST00000446579 M0R1W7 72 aa1.17□□□□□ -2.22
LINC00440-201ENST00000446579 CRIP1P50238 77 aa1.17□□□□□ -2.22
LINC00440-201ENST00000446579 MINOS1Q5TGZ0 78 aa1.17□□□□□ -2.22
LINC00440-201ENST00000446579 KAAG1Q9UBP8 84 aa1.17□□□□□ -2.22
LINC00440-201ENST00000446579 UBE2D4Q9Y2X8 147 aa1.17□□□□□ -2.22
LINC00440-201ENST00000446579 I3L3M4 83 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 K7EIM0 57 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 APELAP0DMC3 54 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 DEFB109BQ30KR1 87 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 PLAC8Q9NZF1 115 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 CENPFP49454 3210 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 MYO7AQ13402 2215 aa1.16□□□□□ -2.22
LINC00440-201ENST00000446579 DNAH12Q6ZR08 3092 aa1.15□□□□□ -2.22
LINC00440-201ENST00000446579 LINC00959A0A1B0GUT2 108 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 IGIPA6NJ69 53 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 H3BUA1 57 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 NDUFA4O00483 81 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 COX6B1P14854 86 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 ATP5EP2Q5VTU8 51 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 USMG5Q96IX5 58 aa1.15□□□□□ -2.23
LINC00440-201ENST00000446579 H0YGX0 51 aa1.14□□□□□ -2.23
LINC00440-201ENST00000446579 PRB3Q04118 309 aaPredicted RBP1.14□□□□□ -2.23
LINC00440-201ENST00000446579 KLK9Q2XQG4 91 aa1.14□□□□□ -2.23
LINC00440-201ENST00000446579 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
LINC00440-201ENST00000446579 DEFB121Q5J5C9 76 aa1.14□□□□□ -2.23
LINC00440-201ENST00000446579 Q8IZM0 81 aa1.14□□□□□ -2.23
LINC00440-201ENST00000446579 RPL39LQ96EH5 51 aaKnown RBP1.14□□□□□ -2.23
LINC00440-201ENST00000446579 NDUFA1O15239 70 aa1.13□□□□□ -2.23
LINC00440-201ENST00000446579 POLR2KP53803 58 aaKnown RBP1.13□□□□□ -2.23
LINC00440-201ENST00000446579 RHPN1-AS1Q9BWJ2 59 aa1.13□□□□□ -2.23
LINC00440-201ENST00000446579 UBL5Q9BZL1 73 aa1.13□□□□□ -2.23
LINC00440-201ENST00000446579 A0A0C4DFX4 3053 aa1.12□□□□□ -2.23
LINC00440-201ENST00000446579 CADP27708 2225 aa1.12□□□□□ -2.23
LINC00440-201ENST00000446579 M0QY20 66 aa1.12□□□□□ -2.23
LINC00440-201ENST00000446579 RPL39P62891 51 aaKnown RBP1.12□□□□□ -2.23
LINC00440-201ENST00000446579 LINC00308Q8TCZ7 52 aa1.12□□□□□ -2.23
LINC00440-201ENST00000446579 HTTP42858 3142 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 JMJD1CQ15652 2540 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 LYNX1G3V0Z9 82 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 HTN1P15515 57 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 LINC00158P58513 81 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 DEFB124Q8NES8 71 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 CRIPTQ9P021 101 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 XIRP2A4UGR9 3374 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 CEP350Q5VT06 3117 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 BRCA2P51587 3418 aa1.11□□□□□ -2.23
LINC00440-201ENST00000446579 ASXL3Q9C0F0 2248 aa1.1□□□□□ -2.23
LINC00440-201ENST00000446579 CDKN2A-AS1Q9UH64 79 aa1.1□□□□□ -2.23
LINC00440-201ENST00000446579 SPTBN5Q9NRC6 3674 aaKnown RBP1.09□□□□□ -2.23
LINC00440-201ENST00000446579 CHD9Q3L8U1 2897 aa1.09□□□□□ -2.23
LINC00440-201ENST00000446579 H3BUX3 64 aa1.09□□□□□ -2.23
LINC00440-201ENST00000446579 NDUFB1O75438 58 aa1.09□□□□□ -2.23
LINC00440-201ENST00000446579 DEFB123Q8N688 67 aa1.09□□□□□ -2.23
LINC00440-201ENST00000446579 TOMM7Q9P0U1 55 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms