RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 IGLV6-57P01721 117 aa11.05□□□□□ -0.64
LAPTM4B-201ENST00000445593 SNURFQ9Y675 71 aa11.05□□□□□ -0.64
LAPTM4B-201ENST00000445593 DNAH10Q8IVF4 4471 aa11.04□□□□□ -0.64
LAPTM4B-201ENST00000445593 VPREB1P12018 145 aa11.04□□□□□ -0.64
LAPTM4B-201ENST00000445593 Q6ZQY7 126 aa11.04□□□□□ -0.64
LAPTM4B-201ENST00000445593 LINC00575Q6W349 94 aa11.03□□□□□ -0.64
LAPTM4B-201ENST00000445593 ZNF73O43830 326 aaPredicted RBP11.02□□□□□ -0.65
LAPTM4B-201ENST00000445593 DIRC1Q969H9 104 aa11.02□□□□□ -0.65
LAPTM4B-201ENST00000445593 FAM168BA1KXE4 195 aa11.02□□□□□ -0.65
LAPTM4B-201ENST00000445593 GHRHP01286 108 aa11.02□□□□□ -0.65
LAPTM4B-201ENST00000445593 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
LAPTM4B-201ENST00000445593 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
LAPTM4B-201ENST00000445593 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
LAPTM4B-201ENST00000445593 DNAH9Q9NYC9 4486 aa11□□□□□ -0.65
LAPTM4B-201ENST00000445593 RPL37AP8A6NKH3 93 aa11□□□□□ -0.65
LAPTM4B-201ENST00000445593 UPK3BQ9BT76 320 aa11□□□□□ -0.65
LAPTM4B-201ENST00000445593 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
LAPTM4B-201ENST00000445593 ACYP1P07311 99 aa10.99□□□□□ -0.65
LAPTM4B-201ENST00000445593 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
LAPTM4B-201ENST00000445593 LINC00846Q9NV44 126 aa10.97□□□□□ -0.65
LAPTM4B-201ENST00000445593 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
LAPTM4B-201ENST00000445593 COX7BP24311 80 aa10.96□□□□□ -0.65
LAPTM4B-201ENST00000445593 MUC7Q8TAX7 377 aa10.96□□□□□ -0.65
LAPTM4B-201ENST00000445593 M0R378 163 aa10.96□□□□□ -0.66
LAPTM4B-201ENST00000445593 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.96□□□□□ -0.66
LAPTM4B-201ENST00000445593 FP248Q71RG6 208 aaPredicted RBP10.96□□□□□ -0.66
LAPTM4B-201ENST00000445593 PSCAO43653 123 aa10.95□□□□□ -0.66
LAPTM4B-201ENST00000445593 DNAH7Q8WXX0 4024 aa10.95□□□□□ -0.66
LAPTM4B-201ENST00000445593 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
LAPTM4B-201ENST00000445593 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
LAPTM4B-201ENST00000445593 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
LAPTM4B-201ENST00000445593 C7orf33Q8WU49 177 aa10.93□□□□□ -0.66
LAPTM4B-201ENST00000445593 DEFB105AQ8NG35 78 aa10.92□□□□□ -0.66
LAPTM4B-201ENST00000445593 LRCOL1A6NCL2 159 aa10.92□□□□□ -0.66
LAPTM4B-201ENST00000445593 RMI2Q96E14 147 aa10.91□□□□□ -0.66
LAPTM4B-201ENST00000445593 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
LAPTM4B-201ENST00000445593 M0R2N4 97 aa10.91□□□□□ -0.66
LAPTM4B-201ENST00000445593 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
LAPTM4B-201ENST00000445593 PRKDCP78527 4128 aaKnown RBP10.89□□□□□ -0.67
LAPTM4B-201ENST00000445593 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
LAPTM4B-201ENST00000445593 MEGF8Q7Z7M0 2845 aa10.89□□□□□ -0.67
LAPTM4B-201ENST00000445593 JMJD7-PLA2G4BH0Y9G9 81 aa10.89□□□□□ -0.67
LAPTM4B-201ENST00000445593 DNAH1Q9P2D7 4330 aa10.88□□□□□ -0.67
LAPTM4B-201ENST00000445593 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
LAPTM4B-201ENST00000445593 F8WEM9 126 aa10.87□□□□□ -0.67
LAPTM4B-201ENST00000445593 CCKP06307 115 aa10.87□□□□□ -0.67
LAPTM4B-201ENST00000445593 B9D2Q9BPU9 175 aa10.87□□□□□ -0.67
LAPTM4B-201ENST00000445593 TGP01266 2768 aa10.86□□□□□ -0.67
LAPTM4B-201ENST00000445593 APLNQ9ULZ1 77 aa10.86□□□□□ -0.67
LAPTM4B-201ENST00000445593 SERP1Q9Y6X1 66 aa10.85□□□□□ -0.67
LAPTM4B-201ENST00000445593 KRTAP7-1Q8IUC3 87 aa10.84□□□□□ -0.67
LAPTM4B-201ENST00000445593 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
LAPTM4B-201ENST00000445593 SMIM26A0A096LP01 95 aa10.83□□□□□ -0.68
LAPTM4B-201ENST00000445593 SRRM2Q9UQ35 2752 aaKnown RBP10.83□□□□□ -0.68
LAPTM4B-201ENST00000445593 TRBV7-6A0A0J9YX20 115 aa10.82□□□□□ -0.68
LAPTM4B-201ENST00000445593 FUSP35637 526 aaKnown RBP eCLIP10.82□□□□□ -0.686e-9■□□□□ 10.6
LAPTM4B-201ENST00000445593 PMAIP1Q13794 54 aa10.82□□□□□ -0.68
LAPTM4B-201ENST00000445593 CHTF8P0CG12 524 aa10.81□□□□□ -0.68
LAPTM4B-201ENST00000445593 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
LAPTM4B-201ENST00000445593 A0A096LNI7 61 aa10.8□□□□□ -0.68
LAPTM4B-201ENST00000445593 H7BZZ5 65 aa10.8□□□□□ -0.68
LAPTM4B-201ENST00000445593 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.8□□□□□ -0.68
LAPTM4B-201ENST00000445593 Q6ZQT0 140 aa10.8□□□□□ -0.68
LAPTM4B-201ENST00000445593 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
LAPTM4B-201ENST00000445593 STARD9Q9P2P6 4700 aa10.79□□□□□ -0.68
LAPTM4B-201ENST00000445593 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
LAPTM4B-201ENST00000445593 ST20-AS1Q8NBB2 130 aa10.78□□□□□ -0.68
LAPTM4B-201ENST00000445593 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
LAPTM4B-201ENST00000445593 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.68
LAPTM4B-201ENST00000445593 UBE2BP63146 152 aa10.77□□□□□ -0.69
LAPTM4B-201ENST00000445593 HAMPP81172 84 aa10.77□□□□□ -0.69
LAPTM4B-201ENST00000445593 SCXQ7RTU7 201 aa10.76□□□□□ -0.69
LAPTM4B-201ENST00000445593 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
LAPTM4B-201ENST00000445593 UBL5Q9BZL1 73 aa10.75□□□□□ -0.69
LAPTM4B-201ENST00000445593 Q6JHZ5 121 aa10.75□□□□□ -0.69
LAPTM4B-201ENST00000445593 Q9BRP9 147 aa10.75□□□□□ -0.69
LAPTM4B-201ENST00000445593 A0A1W2PNN7 141 aa10.75□□□□□ -0.69
LAPTM4B-201ENST00000445593 ERC2-IT1O76042 136 aa10.73□□□□□ -0.69
LAPTM4B-201ENST00000445593 PRLHP81277 87 aa10.72□□□□□ -0.69
LAPTM4B-201ENST00000445593 Q6ZRX8 168 aa10.72□□□□□ -0.69
LAPTM4B-201ENST00000445593 NBDYA0A0U1RRE5 68 aa10.71□□□□□ -0.69
LAPTM4B-201ENST00000445593 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
LAPTM4B-201ENST00000445593 PSPHP1O15172 72 aa10.7□□□□□ -0.7
LAPTM4B-201ENST00000445593 Q8N377 158 aa10.7□□□□□ -0.7
LAPTM4B-201ENST00000445593 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
LAPTM4B-201ENST00000445593 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
LAPTM4B-201ENST00000445593 PHF5AQ7RTV0 110 aaKnown RBP10.69□□□□□ -0.7
LAPTM4B-201ENST00000445593 HIGD2AQ9BW72 106 aa10.69□□□□□ -0.7
LAPTM4B-201ENST00000445593 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
LAPTM4B-201ENST00000445593 Q6ZVQ6 151 aa10.68□□□□□ -0.7
LAPTM4B-201ENST00000445593 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
LAPTM4B-201ENST00000445593 PRYO14603 147 aa10.68□□□□□ -0.7
LAPTM4B-201ENST00000445593 REG3GQ6UW15 175 aa10.67□□□□□ -0.7
LAPTM4B-201ENST00000445593 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
LAPTM4B-201ENST00000445593 TRBV7-4A0A0J9YYF1 115 aa10.67□□□□□ -0.7
LAPTM4B-201ENST00000445593 C16orf90A8MZG2 172 aa10.66□□□□□ -0.7
LAPTM4B-201ENST00000445593 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
LAPTM4B-201ENST00000445593 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
LAPTM4B-201ENST00000445593 A8MU10 97 aa10.65□□□□□ -0.7
LAPTM4B-201ENST00000445593 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms