RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
SF3A1-203ENST00000444440 SPRR1AP35321 89 aa6.31□□□□□ -1.4
SF3A1-203ENST00000444440 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
SF3A1-203ENST00000444440 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
SF3A1-203ENST00000444440 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
SF3A1-203ENST00000444440 KRTAP4-16G5E9R7 235 aaPredicted RBP6.3□□□□□ -1.4
SF3A1-203ENST00000444440 IGLV6-57P01721 117 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 SOSTDC1Q6X4U4 206 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 LITAFQ99732 161 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 TTTY13Q9BZ97 58 aa6.3□□□□□ -1.4
SF3A1-203ENST00000444440 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
SF3A1-203ENST00000444440 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
SF3A1-203ENST00000444440 Q6ZVH6 145 aa6.29□□□□□ -1.4
SF3A1-203ENST00000444440 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
SF3A1-203ENST00000444440 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
SF3A1-203ENST00000444440 TRAV23DV6A0A075B6W5 121 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 B5MCH6 92 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
SF3A1-203ENST00000444440 IFITM1P13164 125 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 SPRR4Q96PI1 79 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
SF3A1-203ENST00000444440 SCGB1D1O95968 90 aa6.27□□□□□ -1.41
SF3A1-203ENST00000444440 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
SF3A1-203ENST00000444440 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
SF3A1-203ENST00000444440 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
SF3A1-203ENST00000444440 C5orf52A6NGY3 159 aa6.25□□□□□ -1.41
SF3A1-203ENST00000444440 ERC2-IT1O76042 136 aa6.25□□□□□ -1.41
SF3A1-203ENST00000444440 Q6ZRX8 168 aa6.25□□□□□ -1.41
SF3A1-203ENST00000444440 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
SF3A1-203ENST00000444440 CTAG1AP78358 180 aa6.23□□□□□ -1.41
SF3A1-203ENST00000444440 MUSTN1Q8IVN3 82 aa6.23□□□□□ -1.41
SF3A1-203ENST00000444440 Q9BRP9 147 aa6.23□□□□□ -1.41
SF3A1-203ENST00000444440 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
SF3A1-203ENST00000444440 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
SF3A1-203ENST00000444440 A6NDN8 102 aa6.21□□□□□ -1.42
SF3A1-203ENST00000444440 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
SF3A1-203ENST00000444440 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
SF3A1-203ENST00000444440 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
SF3A1-203ENST00000444440 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
SF3A1-203ENST00000444440 TRBV7-6A0A0J9YX20 115 aa6.19□□□□□ -1.42
SF3A1-203ENST00000444440 COX7BP24311 80 aa6.19□□□□□ -1.42
SF3A1-203ENST00000444440 Q8NBF4 154 aa6.19□□□□□ -1.42
SF3A1-203ENST00000444440 C6orf99Q4VX62 202 aa6.18□□□□□ -1.42
SF3A1-203ENST00000444440 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
SF3A1-203ENST00000444440 COX8AP10176 69 aa6.17□□□□□ -1.42
SF3A1-203ENST00000444440 ELOF1P60002 83 aaKnown RBP6.17□□□□□ -1.42
SF3A1-203ENST00000444440 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
SF3A1-203ENST00000444440 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
SF3A1-203ENST00000444440 SSBP3-AS1Q7Z2R9 100 aa6.17□□□□□ -1.42
SF3A1-203ENST00000444440 IGLV9-49A0A0B4J1Y8 123 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 A0A1B0GWB2 263 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 A4D1N5 150 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 DLEU1O43261 78 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 MOBPQ13875 183 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 VAMP3Q15836 100 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 ST20-AS1Q8NBB2 130 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
SF3A1-203ENST00000444440 VAMP8Q9BV40 100 aa6.15□□□□□ -1.42
SF3A1-203ENST00000444440 SPINK1P00995 79 aa6.14□□□□□ -1.43
SF3A1-203ENST00000444440 TAL2Q16559 108 aa6.14□□□□□ -1.43
SF3A1-203ENST00000444440 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
SF3A1-203ENST00000444440 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
SF3A1-203ENST00000444440 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 SMIM11BQ8TCY0 68 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 LAMTOR3Q9UHA4 124 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
SF3A1-203ENST00000444440 SLC25A20O43772 301 aa6.12□□□□□ -1.43
SF3A1-203ENST00000444440 SPRR1BP22528 89 aa6.12□□□□□ -1.43
SF3A1-203ENST00000444440 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
SF3A1-203ENST00000444440 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
SF3A1-203ENST00000444440 Q8N377 158 aa6.11□□□□□ -1.43
SF3A1-203ENST00000444440 DEFB105AQ8NG35 78 aa6.11□□□□□ -1.43
SF3A1-203ENST00000444440 HIGD1BQ9P298 99 aa6.11□□□□□ -1.43
SF3A1-203ENST00000444440 FP248Q71RG6 208 aaPredicted RBP6.1□□□□□ -1.43
SF3A1-203ENST00000444440 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
SF3A1-203ENST00000444440 TMA7Q9Y2S6 64 aaKnown RBP6.09□□□□□ -1.43
SF3A1-203ENST00000444440 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
SF3A1-203ENST00000444440 RAB37Q96AX2 223 aa6.08□□□□□ -1.44
SF3A1-203ENST00000444440 C12orf57Q99622 126 aa6.07□□□□□ -1.44
SF3A1-203ENST00000444440 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
SF3A1-203ENST00000444440 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 SNCGO76070 127 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 Q1RN00 199 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 BVES-AS1Q5T3Y7 98 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 LINC00575Q6W349 94 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
SF3A1-203ENST00000444440 TMEM238LA0A1B0GVL6 79 aa6.05□□□□□ -1.44
SF3A1-203ENST00000444440 A6NJY4 79 aa6.05□□□□□ -1.44
SF3A1-203ENST00000444440 CFC1BP0CG36 223 aa6.05□□□□□ -1.44
SF3A1-203ENST00000444440 CFC1P0CG37 223 aa6.05□□□□□ -1.44
SF3A1-203ENST00000444440 PYY3Q5JQD4 70 aa6.05□□□□□ -1.44
SF3A1-203ENST00000444440 H7C2G1 150 aa6.04□□□□□ -1.44
SF3A1-203ENST00000444440 C2orf91Q6ZV80 131 aa6.04□□□□□ -1.44
SF3A1-203ENST00000444440 CEND1Q8N111 149 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms