RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
CDCA4P3-201ENST00000442572 HIST1H2BLQ99880 126 aa7.43□□□□□ -1.22
CDCA4P3-201ENST00000442572 SPANXCQ9NY87 97 aa7.43□□□□□ -1.22
CDCA4P3-201ENST00000442572 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
CDCA4P3-201ENST00000442572 A0A087X002 238 aa7.42□□□□□ -1.22
CDCA4P3-201ENST00000442572 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
CDCA4P3-201ENST00000442572 LINC00308Q8TCZ7 52 aa7.42□□□□□ -1.22
CDCA4P3-201ENST00000442572 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
CDCA4P3-201ENST00000442572 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
CDCA4P3-201ENST00000442572 CTAG1AP78358 180 aa7.41□□□□□ -1.22
CDCA4P3-201ENST00000442572 Q6ZVH6 145 aa7.41□□□□□ -1.22
CDCA4P3-201ENST00000442572 SPANXDQ9BXN6 97 aa7.41□□□□□ -1.22
CDCA4P3-201ENST00000442572 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
CDCA4P3-201ENST00000442572 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
CDCA4P3-201ENST00000442572 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 B5MCH6 92 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 IFITM1P13164 125 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 NPC2P61916 151 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 TTTY13Q9BZ97 58 aa7.39□□□□□ -1.23
CDCA4P3-201ENST00000442572 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
CDCA4P3-201ENST00000442572 KRTAP13-2Q52LG2 175 aa7.38□□□□□ -1.23
CDCA4P3-201ENST00000442572 Q6ZRX8 168 aa7.38□□□□□ -1.23
CDCA4P3-201ENST00000442572 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
CDCA4P3-201ENST00000442572 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
CDCA4P3-201ENST00000442572 SMCR5Q8TEV8 140 aa7.37□□□□□ -1.23
CDCA4P3-201ENST00000442572 ANAPC11Q9NYG5 84 aa7.37□□□□□ -1.23
CDCA4P3-201ENST00000442572 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
CDCA4P3-201ENST00000442572 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
CDCA4P3-201ENST00000442572 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
CDCA4P3-201ENST00000442572 C5orf52A6NGY3 159 aa7.35□□□□□ -1.23
CDCA4P3-201ENST00000442572 PCP2Q8IVA1 136 aa7.35□□□□□ -1.23
CDCA4P3-201ENST00000442572 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
CDCA4P3-201ENST00000442572 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
CDCA4P3-201ENST00000442572 OR13C6PQ8NH95 151 aa7.34□□□□□ -1.23
CDCA4P3-201ENST00000442572 Q9BRP9 147 aa7.33□□□□□ -1.24
CDCA4P3-201ENST00000442572 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
CDCA4P3-201ENST00000442572 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
CDCA4P3-201ENST00000442572 SCGB1D1O95968 90 aa7.3□□□□□ -1.24
CDCA4P3-201ENST00000442572 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
CDCA4P3-201ENST00000442572 C3orf22Q8N5N4 141 aa7.3□□□□□ -1.24
CDCA4P3-201ENST00000442572 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
CDCA4P3-201ENST00000442572 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
CDCA4P3-201ENST00000442572 TSPAN13O95857 204 aa7.29□□□□□ -1.24
CDCA4P3-201ENST00000442572 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
CDCA4P3-201ENST00000442572 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
CDCA4P3-201ENST00000442572 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
CDCA4P3-201ENST00000442572 GAGE2AQ6NT46 116 aa7.28□□□□□ -1.24
CDCA4P3-201ENST00000442572 COX7BP24311 80 aa7.27□□□□□ -1.25
CDCA4P3-201ENST00000442572 PRR4Q16378 134 aa7.27□□□□□ -1.25
CDCA4P3-201ENST00000442572 C6orf99Q4VX62 202 aa7.27□□□□□ -1.25
CDCA4P3-201ENST00000442572 SSBP3-AS1Q7Z2R9 100 aa7.27□□□□□ -1.25
CDCA4P3-201ENST00000442572 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
CDCA4P3-201ENST00000442572 DLEU1O43261 78 aa7.26□□□□□ -1.25
CDCA4P3-201ENST00000442572 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 A4D1N5 150 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 A6NDN8 102 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 SPINK1P00995 79 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 COX8AP10176 69 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 SPRR1BP22528 89 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 SLC25A34Q6PIV7 304 aa7.25□□□□□ -1.25
CDCA4P3-201ENST00000442572 Q8NBF4 154 aa7.24□□□□□ -1.25
CDCA4P3-201ENST00000442572 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
CDCA4P3-201ENST00000442572 MOBPQ13875 183 aa7.22□□□□□ -1.25
CDCA4P3-201ENST00000442572 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.26
CDCA4P3-201ENST00000442572 ST20-AS1Q8NBB2 130 aa7.21□□□□□ -1.26
CDCA4P3-201ENST00000442572 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
CDCA4P3-201ENST00000442572 SMIM11BQ8TCY0 68 aa7.2□□□□□ -1.26
CDCA4P3-201ENST00000442572 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
CDCA4P3-201ENST00000442572 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
CDCA4P3-201ENST00000442572 VAMP3Q15836 100 aa7.19□□□□□ -1.26
CDCA4P3-201ENST00000442572 FP248Q71RG6 208 aaPredicted RBP7.19□□□□□ -1.26
CDCA4P3-201ENST00000442572 HIGD1BQ9P298 99 aa7.19□□□□□ -1.26
CDCA4P3-201ENST00000442572 LAMTOR3Q9UHA4 124 aa7.19□□□□□ -1.26
CDCA4P3-201ENST00000442572 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
CDCA4P3-201ENST00000442572 TAL2Q16559 108 aa7.18□□□□□ -1.26
CDCA4P3-201ENST00000442572 SPATA45Q537H7 98 aa7.18□□□□□ -1.26
CDCA4P3-201ENST00000442572 C9orf153Q5TBE3 101 aa7.18□□□□□ -1.26
CDCA4P3-201ENST00000442572 PAM16Q9Y3D7 125 aa7.18□□□□□ -1.26
CDCA4P3-201ENST00000442572 LRP2P98164 4655 aa7.17□□□□□ -1.26
CDCA4P3-201ENST00000442572 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
CDCA4P3-201ENST00000442572 IGLV5-48A0A075B6I7 105 aa7.16□□□□□ -1.26
CDCA4P3-201ENST00000442572 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
CDCA4P3-201ENST00000442572 SLC25A20O43772 301 aa7.16□□□□□ -1.26
CDCA4P3-201ENST00000442572 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
CDCA4P3-201ENST00000442572 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
CDCA4P3-201ENST00000442572 H3BS24 57 aa7.14□□□□□ -1.27
CDCA4P3-201ENST00000442572 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
CDCA4P3-201ENST00000442572 Q8N377 158 aa7.13□□□□□ -1.27
CDCA4P3-201ENST00000442572 LINC01547P58512 204 aaPredicted RBP7.12□□□□□ -1.27
CDCA4P3-201ENST00000442572 CD164Q04900 197 aa7.12□□□□□ -1.27
CDCA4P3-201ENST00000442572 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
CDCA4P3-201ENST00000442572 DEFB105AQ8NG35 78 aa7.12□□□□□ -1.27
CDCA4P3-201ENST00000442572 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
CDCA4P3-201ENST00000442572 PYY3Q5JQD4 70 aa7.11□□□□□ -1.27
CDCA4P3-201ENST00000442572 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
CDCA4P3-201ENST00000442572 LIMD2Q9BT23 127 aa7.11□□□□□ -1.27
CDCA4P3-201ENST00000442572 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
CDCA4P3-201ENST00000442572 hADV29S1A0JD25 119 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms