RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 MRAPQ8TCY5 172 aa8.66□□□□□ -1.02
SLC48A1-201ENST00000442218 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
SLC48A1-201ENST00000442218 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
SLC48A1-201ENST00000442218 BPY2O14599 106 aa8.65□□□□□ -1.02
SLC48A1-201ENST00000442218 CASC10Q5T4H9 136 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 HRCT1Q6UXD1 115 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 TMEM258P61165 79 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 C1orf43Q9BWL3 253 aa8.64□□□□□ -1.03
SLC48A1-201ENST00000442218 EGFEM1PQ0D2K5 195 aa8.63□□□□□ -1.03
SLC48A1-201ENST00000442218 ELOF1P60002 83 aaKnown RBP8.62□□□□□ -1.03
SLC48A1-201ENST00000442218 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
SLC48A1-201ENST00000442218 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
SLC48A1-201ENST00000442218 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
SLC48A1-201ENST00000442218 F8WEM9 126 aa8.6□□□□□ -1.03
SLC48A1-201ENST00000442218 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
SLC48A1-201ENST00000442218 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SLC48A1-201ENST00000442218 ST20-AS1Q8NBB2 130 aa8.59□□□□□ -1.03
SLC48A1-201ENST00000442218 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
SLC48A1-201ENST00000442218 M0R378 163 aa8.59□□□□□ -1.03
SLC48A1-201ENST00000442218 TRBV7-4A0A0J9YYF1 115 aa8.58□□□□□ -1.04
SLC48A1-201ENST00000442218 H7BZZ5 65 aa8.58□□□□□ -1.04
SLC48A1-201ENST00000442218 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
SLC48A1-201ENST00000442218 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
SLC48A1-201ENST00000442218 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
SLC48A1-201ENST00000442218 FAM236DA0A1B0GTK5 79 aa8.57□□□□□ -1.04
SLC48A1-201ENST00000442218 FAM236CP0DP71 79 aa8.57□□□□□ -1.04
SLC48A1-201ENST00000442218 C7orf33Q8WU49 177 aa8.57□□□□□ -1.04
SLC48A1-201ENST00000442218 TRAV7A0A075B6U4 112 aa8.56□□□□□ -1.04
SLC48A1-201ENST00000442218 NREPQ16612 68 aa8.56□□□□□ -1.04
SLC48A1-201ENST00000442218 MDFIQ99750 246 aa8.55□□□□□ -1.04
SLC48A1-201ENST00000442218 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
SLC48A1-201ENST00000442218 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
SLC48A1-201ENST00000442218 HUWE1Q7Z6Z7 4374 aaKnown RBP8.53□□□□□ -1.04
SLC48A1-201ENST00000442218 Q5XG85 94 aa8.53□□□□□ -1.04
SLC48A1-201ENST00000442218 Q8N377 158 aa8.53□□□□□ -1.04
SLC48A1-201ENST00000442218 ERC2-IT1O76042 136 aa8.52□□□□□ -1.05
SLC48A1-201ENST00000442218 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.05
SLC48A1-201ENST00000442218 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
SLC48A1-201ENST00000442218 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
SLC48A1-201ENST00000442218 RPS28P62857 69 aaKnown RBP8.51□□□□□ -1.05
SLC48A1-201ENST00000442218 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
SLC48A1-201ENST00000442218 CXCL6P80162 114 aa8.51□□□□□ -1.05
SLC48A1-201ENST00000442218 Q9BRP9 147 aa8.5□□□□□ -1.05
SLC48A1-201ENST00000442218 PDE6GP18545 87 aa8.49□□□□□ -1.05
SLC48A1-201ENST00000442218 K7EIL1 84 aa8.49□□□□□ -1.05
SLC48A1-201ENST00000442218 IGKV4-1P06312 121 aa8.49□□□□□ -1.05
SLC48A1-201ENST00000442218 UBE2BP63146 152 aa8.49□□□□□ -1.05
SLC48A1-201ENST00000442218 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
SLC48A1-201ENST00000442218 LRCOL1A6NCL2 159 aa8.48□□□□□ -1.05
SLC48A1-201ENST00000442218 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
SLC48A1-201ENST00000442218 ETDCA0A1B0GVM5 59 aa8.48□□□□□ -1.05
SLC48A1-201ENST00000442218 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
SLC48A1-201ENST00000442218 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
SLC48A1-201ENST00000442218 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.05
SLC48A1-201ENST00000442218 LINC00588Q9Y4M8 146 aa8.46□□□□□ -1.05
SLC48A1-201ENST00000442218 A0A1W2PNM2 257 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 PRR4Q16378 134 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 LINC01556Q5JQF7 62 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 SMIM29Q86T20 159 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.06
SLC48A1-201ENST00000442218 PRLHP81277 87 aa8.44□□□□□ -1.06
SLC48A1-201ENST00000442218 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
SLC48A1-201ENST00000442218 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
SLC48A1-201ENST00000442218 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
SLC48A1-201ENST00000442218 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
SLC48A1-201ENST00000442218 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
SLC48A1-201ENST00000442218 A0A096LNI7 61 aa8.43□□□□□ -1.06
SLC48A1-201ENST00000442218 Q6ZRX8 168 aa8.42□□□□□ -1.06
SLC48A1-201ENST00000442218 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
SLC48A1-201ENST00000442218 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.06
SLC48A1-201ENST00000442218 K7EQZ3 153 aa8.4□□□□□ -1.07
SLC48A1-201ENST00000442218 TGP01266 2768 aa8.39□□□□□ -1.07
SLC48A1-201ENST00000442218 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
SLC48A1-201ENST00000442218 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
SLC48A1-201ENST00000442218 LINC00336Q6ZUF6 198 aa8.39□□□□□ -1.07
SLC48A1-201ENST00000442218 DNAH1Q9P2D7 4330 aa8.39□□□□□ -1.07
SLC48A1-201ENST00000442218 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
SLC48A1-201ENST00000442218 CHTF8P0CG12 524 aa8.38□□□□□ -1.07
SLC48A1-201ENST00000442218 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
SLC48A1-201ENST00000442218 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
SLC48A1-201ENST00000442218 H3BNG1 76 aa8.37□□□□□ -1.07
SLC48A1-201ENST00000442218 H3BQ85 93 aa8.37□□□□□ -1.07
SLC48A1-201ENST00000442218 RPL37AP61513 92 aaKnown RBP8.37□□□□□ -1.07
SLC48A1-201ENST00000442218 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
SLC48A1-201ENST00000442218 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
SLC48A1-201ENST00000442218 DNAH10OSP0CZ25 163 aa8.36□□□□□ -1.07
SLC48A1-201ENST00000442218 EPM2AB3EWF7 344 aa8.36□□□□□ -1.07
SLC48A1-201ENST00000442218 PRYO14603 147 aa8.36□□□□□ -1.07
SLC48A1-201ENST00000442218 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
SLC48A1-201ENST00000442218 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
SLC48A1-201ENST00000442218 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
SLC48A1-201ENST00000442218 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.08
SLC48A1-201ENST00000442218 LINC00476Q8WZB0 136 aa8.33□□□□□ -1.08
SLC48A1-201ENST00000442218 DSCR10P59022 87 aa8.33□□□□□ -1.08
SLC48A1-201ENST00000442218 A0A087WSZ3 146 aa8.32□□□□□ -1.08
SLC48A1-201ENST00000442218 Q8NBF4 154 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms