RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
CCDC39-201ENST00000442201 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
CCDC39-201ENST00000442201 TRAV23DV6A0A075B6W5 121 aa5.38□□□□□ -1.55
CCDC39-201ENST00000442201 WWC2-AS2Q96NR7 200 aa5.37□□□□□ -1.55
CCDC39-201ENST00000442201 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
CCDC39-201ENST00000442201 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
CCDC39-201ENST00000442201 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
CCDC39-201ENST00000442201 Q1T7F1 81 aa5.36□□□□□ -1.55
CCDC39-201ENST00000442201 TRBV7-4A0A0J9YYF1 115 aa5.35□□□□□ -1.55
CCDC39-201ENST00000442201 LINC00158P58513 81 aa5.35□□□□□ -1.55
CCDC39-201ENST00000442201 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
CCDC39-201ENST00000442201 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
CCDC39-201ENST00000442201 C15orf56Q8N910 161 aa5.35□□□□□ -1.55
CCDC39-201ENST00000442201 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
CCDC39-201ENST00000442201 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
CCDC39-201ENST00000442201 UNQ6190/PRO20217Q6UXQ8 127 aa5.34□□□□□ -1.55
CCDC39-201ENST00000442201 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
CCDC39-201ENST00000442201 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 NBDYA0A0U1RRE5 68 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 TGP01266 2768 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-201ENST00000442201 COX17Q14061 63 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
CCDC39-201ENST00000442201 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
CCDC39-201ENST00000442201 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
CCDC39-201ENST00000442201 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
CCDC39-201ENST00000442201 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
CCDC39-201ENST00000442201 PSCAO43653 123 aa5.31□□□□□ -1.56
CCDC39-201ENST00000442201 C9orf116Q5BN46 136 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-201ENST00000442201 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
CCDC39-201ENST00000442201 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
CCDC39-201ENST00000442201 C3orf84H3BNL1 204 aa5.3□□□□□ -1.56
CCDC39-201ENST00000442201 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
CCDC39-201ENST00000442201 LECT2O14960 151 aa5.29□□□□□ -1.56
CCDC39-201ENST00000442201 M0R2N4 97 aa5.29□□□□□ -1.56
CCDC39-201ENST00000442201 SND1-IT1Q9HBX3 110 aa5.29□□□□□ -1.56
CCDC39-201ENST00000442201 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
CCDC39-201ENST00000442201 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
CCDC39-201ENST00000442201 LINC00167Q96N53 147 aa5.29□□□□□ -1.56
CCDC39-201ENST00000442201 STARD9Q9P2P6 4700 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 M0R378 163 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 LY6G6CO95867 125 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 Q6ZRP5 223 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 A0A087WYN8 130 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 H0YGX0 51 aa5.28□□□□□ -1.56
CCDC39-201ENST00000442201 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
CCDC39-201ENST00000442201 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
CCDC39-201ENST00000442201 NCR3O14931 201 aa5.27□□□□□ -1.57
CCDC39-201ENST00000442201 C14orf177Q52M58 125 aa5.27□□□□□ -1.57
CCDC39-201ENST00000442201 PHF5AQ7RTV0 110 aaKnown RBP5.27□□□□□ -1.57
CCDC39-201ENST00000442201 JMJD7-PLA2G4BH0Y9G9 81 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 NDUFS5O43920 106 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 Q6ZR54 194 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 Q6ZVQ6 151 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 SLPIP03973 132 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 Q6ZRN7 208 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-201ENST00000442201 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
CCDC39-201ENST00000442201 CXCL6P80162 114 aa5.25□□□□□ -1.57
CCDC39-201ENST00000442201 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
CCDC39-201ENST00000442201 IGKV2-28A0A075B6P5 120 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 C8orf87E5RJ46 101 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 IGKV2D-28P01615 120 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 LYSTQ99698 3801 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 DNAH1Q9P2D7 4330 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 H3BS24 57 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 LRCOL1A6NCL2 159 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 UBE2BP63146 152 aa5.24□□□□□ -1.57
CCDC39-201ENST00000442201 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
CCDC39-201ENST00000442201 PRYO14603 147 aa5.23□□□□□ -1.57
CCDC39-201ENST00000442201 FUSP35637 526 aaKnown RBP eCLIP5.23□□□□□ -1.57
CCDC39-201ENST00000442201 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-201ENST00000442201 CNBPP62633 177 aaKnown RBP5.23□□□□□ -1.57
CCDC39-201ENST00000442201 C1orf134Q5TEV5 83 aa5.23□□□□□ -1.57
CCDC39-201ENST00000442201 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
CCDC39-201ENST00000442201 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-201ENST00000442201 PRR3P79522 188 aaKnown RBP5.22□□□□□ -1.57
CCDC39-201ENST00000442201 NREPQ16612 68 aa5.22□□□□□ -1.57
CCDC39-201ENST00000442201 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
CCDC39-201ENST00000442201 Q8NDZ9 215 aa5.21□□□□□ -1.57
CCDC39-201ENST00000442201 TRAV22A0A0B4J277 110 aa5.21□□□□□ -1.58
CCDC39-201ENST00000442201 A6NN06 94 aa5.21□□□□□ -1.58
CCDC39-201ENST00000442201 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-201ENST00000442201 A0A087WTM6 91 aa5.21□□□□□ -1.58
CCDC39-201ENST00000442201 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
CCDC39-201ENST00000442201 Q8N814 137 aa5.2□□□□□ -1.58
CCDC39-201ENST00000442201 TMEM256-PLSCR3K7ERE1 68 aa5.2□□□□□ -1.58
CCDC39-201ENST00000442201 VPREB1P12018 145 aa5.19□□□□□ -1.58
CCDC39-201ENST00000442201 Q6ZQT0 140 aa5.19□□□□□ -1.58
CCDC39-201ENST00000442201 C9orf163Q8N9P6 203 aa5.19□□□□□ -1.58
CCDC39-201ENST00000442201 ATP11AUNQ6ZP68 121 aa5.18□□□□□ -1.58
CCDC39-201ENST00000442201 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
CCDC39-201ENST00000442201 LCE6AA0A183 80 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms