RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KRTAP10-11P60412 298 aa10.88□□□□□ -0.67
SEMA3B-207ENST00000441915 Q6ZRP5 223 aa10.88□□□□□ -0.67
SEMA3B-207ENST00000441915 ANK2Q01484 3957 aa10.88□□□□□ -0.67
SEMA3B-207ENST00000441915 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
SEMA3B-207ENST00000441915 PKD1L1Q8TDX9 2849 aa10.88□□□□□ -0.67
SEMA3B-207ENST00000441915 LINC01556Q5JQF7 62 aa10.87□□□□□ -0.67
SEMA3B-207ENST00000441915 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
SEMA3B-207ENST00000441915 KLKP1Q107X0 134 aa10.86□□□□□ -0.67
SEMA3B-207ENST00000441915 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
SEMA3B-207ENST00000441915 DEFB131BA0A096LNP1 70 aa10.85□□□□□ -0.67
SEMA3B-207ENST00000441915 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
SEMA3B-207ENST00000441915 C11orf45Q8TAV5 145 aa10.82□□□□□ -0.68
SEMA3B-207ENST00000441915 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
SEMA3B-207ENST00000441915 RMI2Q96E14 147 aa10.81□□□□□ -0.68
SEMA3B-207ENST00000441915 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
SEMA3B-207ENST00000441915 F8WEM9 126 aa10.81□□□□□ -0.68
SEMA3B-207ENST00000441915 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
SEMA3B-207ENST00000441915 KCNQ1DNQ9H478 68 aa10.8□□□□□ -0.68
SEMA3B-207ENST00000441915 TENM3Q9P273 2699 aa10.78□□□□□ -0.68
SEMA3B-207ENST00000441915 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
SEMA3B-207ENST00000441915 DNAH10OSP0CZ25 163 aa10.77□□□□□ -0.69
SEMA3B-207ENST00000441915 SERTAD4-AS1Q5TG53 156 aa10.77□□□□□ -0.69
SEMA3B-207ENST00000441915 C7orf33Q8WU49 177 aa10.77□□□□□ -0.69
SEMA3B-207ENST00000441915 BRK1Q8WUW1 75 aa10.76□□□□□ -0.69
SEMA3B-207ENST00000441915 NDUFC1O43677 76 aa10.75□□□□□ -0.69
SEMA3B-207ENST00000441915 DEFB105AQ8NG35 78 aa10.75□□□□□ -0.69
SEMA3B-207ENST00000441915 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
SEMA3B-207ENST00000441915 ATP5EP56381 51 aaPredicted RBP10.73□□□□□ -0.69
SEMA3B-207ENST00000441915 NREPQ16612 68 aa10.73□□□□□ -0.69
SEMA3B-207ENST00000441915 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
SEMA3B-207ENST00000441915 V9GYY9 64 aa10.72□□□□□ -0.69
SEMA3B-207ENST00000441915 Q8N377 158 aa10.72□□□□□ -0.69
SEMA3B-207ENST00000441915 PLA2G2DQ9UNK4 145 aa10.72□□□□□ -0.69
SEMA3B-207ENST00000441915 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
SEMA3B-207ENST00000441915 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
SEMA3B-207ENST00000441915 SEC61GP60059 68 aa10.71□□□□□ -0.7
SEMA3B-207ENST00000441915 TM2D3Q9BRN9 247 aa10.71□□□□□ -0.7
SEMA3B-207ENST00000441915 C3orf84H3BNL1 204 aa10.7□□□□□ -0.7
SEMA3B-207ENST00000441915 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
SEMA3B-207ENST00000441915 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
SEMA3B-207ENST00000441915 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
SEMA3B-207ENST00000441915 Q6ZRX8 168 aa10.7□□□□□ -0.7
SEMA3B-207ENST00000441915 KRTAP24-1Q3LI83 254 aa10.69□□□□□ -0.7
SEMA3B-207ENST00000441915 F8P00451 2351 aa10.69□□□□□ -0.7
SEMA3B-207ENST00000441915 BPY2O14599 106 aa10.68□□□□□ -0.7
SEMA3B-207ENST00000441915 Q8N9L7 120 aa10.68□□□□□ -0.7
SEMA3B-207ENST00000441915 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
SEMA3B-207ENST00000441915 PRYO14603 147 aa10.68□□□□□ -0.7
SEMA3B-207ENST00000441915 IGLV1-50A0A075B6I6 118 aa10.67□□□□□ -0.7
SEMA3B-207ENST00000441915 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
SEMA3B-207ENST00000441915 STAB1Q9NY15 2570 aa10.67□□□□□ -0.7
SEMA3B-207ENST00000441915 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
SEMA3B-207ENST00000441915 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
SEMA3B-207ENST00000441915 IGLV5-37A0A075B6J1 123 aa10.66□□□□□ -0.7
SEMA3B-207ENST00000441915 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
SEMA3B-207ENST00000441915 Q9BRP9 147 aa10.66□□□□□ -0.7
SEMA3B-207ENST00000441915 FLNBO75369 2602 aaKnown RBP10.65□□□□□ -0.7
SEMA3B-207ENST00000441915 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.7
SEMA3B-207ENST00000441915 CASC10Q5T4H9 136 aa10.65□□□□□ -0.7
SEMA3B-207ENST00000441915 SPRR1AP35321 89 aa10.64□□□□□ -0.71
SEMA3B-207ENST00000441915 A0A1B0GW54 56 aa10.64□□□□□ -0.71
SEMA3B-207ENST00000441915 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
SEMA3B-207ENST00000441915 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
SEMA3B-207ENST00000441915 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
SEMA3B-207ENST00000441915 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
SEMA3B-207ENST00000441915 FBN1P35555 2871 aaKnown RBP10.61□□□□□ -0.71
SEMA3B-207ENST00000441915 MRPL55Q7Z7F7 128 aaKnown RBP10.61□□□□□ -0.71
SEMA3B-207ENST00000441915 C1orf137Q5JT78 98 aa10.61□□□□□ -0.71
SEMA3B-207ENST00000441915 KRTAP7-1Q8IUC3 87 aa10.61□□□□□ -0.71
SEMA3B-207ENST00000441915 ST20-AS1Q8NBB2 130 aa10.6□□□□□ -0.71
SEMA3B-207ENST00000441915 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
SEMA3B-207ENST00000441915 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
SEMA3B-207ENST00000441915 TNP2Q05952 138 aa10.6□□□□□ -0.71
SEMA3B-207ENST00000441915 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
SEMA3B-207ENST00000441915 A0A1W2PNM2 257 aa10.59□□□□□ -0.71
SEMA3B-207ENST00000441915 MAST4O15021 2626 aa10.59□□□□□ -0.71
SEMA3B-207ENST00000441915 UBE2BP63146 152 aa10.57□□□□□ -0.72
SEMA3B-207ENST00000441915 OCR1Q9BZK8 76 aa10.57□□□□□ -0.72
SEMA3B-207ENST00000441915 Q8NBF4 154 aa10.57□□□□□ -0.72
SEMA3B-207ENST00000441915 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
SEMA3B-207ENST00000441915 REG3GQ6UW15 175 aa10.54□□□□□ -0.72
SEMA3B-207ENST00000441915 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
SEMA3B-207ENST00000441915 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
SEMA3B-207ENST00000441915 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
SEMA3B-207ENST00000441915 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
SEMA3B-207ENST00000441915 PRR15Q8IV56 129 aa10.47□□□□□ -0.73
SEMA3B-207ENST00000441915 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
SEMA3B-207ENST00000441915 LINC00476Q8WZB0 136 aa10.46□□□□□ -0.73
SEMA3B-207ENST00000441915 K7EIL1 84 aa10.46□□□□□ -0.74
SEMA3B-207ENST00000441915 DSCR10P59022 87 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 FAM30AQ9NZY2 134 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 A0A096LNI7 61 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 HIGD2AQ9BW72 106 aa10.45□□□□□ -0.74
SEMA3B-207ENST00000441915 PMAIP1Q13794 54 aa10.44□□□□□ -0.74
SEMA3B-207ENST00000441915 K7EQZ3 153 aa10.43□□□□□ -0.74
SEMA3B-207ENST00000441915 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
SEMA3B-207ENST00000441915 PSCAO43653 123 aa10.42□□□□□ -0.74
SEMA3B-207ENST00000441915 PRLHP81277 87 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms