RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
VPS50-203ENST00000436177 DDTP30046 118 aa4.41□□□□□ -1.7
VPS50-203ENST00000436177 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
VPS50-203ENST00000436177 HERVK_113P61574 105 aa4.41□□□□□ -1.7
VPS50-203ENST00000436177 S100A7L2Q5SY68 101 aa4.41□□□□□ -1.7
VPS50-203ENST00000436177 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
VPS50-203ENST00000436177 PLNP26678 52 aa4.4□□□□□ -1.71
VPS50-203ENST00000436177 SPRR1AP35321 89 aa4.4□□□□□ -1.71
VPS50-203ENST00000436177 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
VPS50-203ENST00000436177 JOSD1Q15040 202 aaPredicted RBP4.4□□□□□ -1.71
VPS50-203ENST00000436177 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
VPS50-203ENST00000436177 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
VPS50-203ENST00000436177 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
VPS50-203ENST00000436177 SLC25A20O43772 301 aa4.39□□□□□ -1.71
VPS50-203ENST00000436177 LGALS3P17931 250 aaKnown RBP4.39□□□□□ -1.71
VPS50-203ENST00000436177 LINC00483Q53H64 154 aa4.39□□□□□ -1.71
VPS50-203ENST00000436177 C9orf153Q5TBE3 101 aa4.39□□□□□ -1.71
VPS50-203ENST00000436177 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
VPS50-203ENST00000436177 B5MCH6 92 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 KRTAP4-16G5E9R7 235 aaPredicted RBP4.38□□□□□ -1.71
VPS50-203ENST00000436177 LEPROTO15243 131 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 NMUP48645 174 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
VPS50-203ENST00000436177 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
VPS50-203ENST00000436177 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 Q6ZRX8 168 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 SSBP3-AS1Q7Z2R9 100 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
VPS50-203ENST00000436177 TRAV23DV6A0A075B6W5 121 aa4.37□□□□□ -1.71
VPS50-203ENST00000436177 J3QQQ9 107 aa4.37□□□□□ -1.71
VPS50-203ENST00000436177 DPM2O94777 84 aa4.37□□□□□ -1.71
VPS50-203ENST00000436177 ERC2-IT1O76042 136 aa4.36□□□□□ -1.71
VPS50-203ENST00000436177 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
VPS50-203ENST00000436177 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
VPS50-203ENST00000436177 SERF1AO75920 110 aa4.35□□□□□ -1.71
VPS50-203ENST00000436177 NDUFC2O95298 119 aa4.35□□□□□ -1.71
VPS50-203ENST00000436177 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
VPS50-203ENST00000436177 Q8N377 158 aa4.35□□□□□ -1.71
VPS50-203ENST00000436177 Q9BRP9 147 aa4.35□□□□□ -1.71
VPS50-203ENST00000436177 LOC107984156A0A0G2JMH3 177 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 IGKCP01834 107 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 FABP4P15090 132 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 NPC2P61916 151 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 ARL17AQ8IVW1 177 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
VPS50-203ENST00000436177 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
VPS50-203ENST00000436177 TRGC2P03986 189 aa4.33□□□□□ -1.72
VPS50-203ENST00000436177 OR13C6PQ8NH95 151 aa4.33□□□□□ -1.72
VPS50-203ENST00000436177 YPEL4Q96NS1 127 aa4.33□□□□□ -1.72
VPS50-203ENST00000436177 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
VPS50-203ENST00000436177 C21orf62-AS1Q17RA5 79 aa4.31□□□□□ -1.72
VPS50-203ENST00000436177 ST20-AS1Q8NBB2 130 aa4.31□□□□□ -1.72
VPS50-203ENST00000436177 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
VPS50-203ENST00000436177 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
VPS50-203ENST00000436177 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
VPS50-203ENST00000436177 SPANXCQ9NY87 97 aa4.3□□□□□ -1.72
VPS50-203ENST00000436177 E9PLD3 99 aa4.29□□□□□ -1.72
VPS50-203ENST00000436177 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
VPS50-203ENST00000436177 SOSTDC1Q6X4U4 206 aa4.29□□□□□ -1.72
VPS50-203ENST00000436177 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
VPS50-203ENST00000436177 COX7BP24311 80 aa4.28□□□□□ -1.72
VPS50-203ENST00000436177 TAL2Q16559 108 aa4.28□□□□□ -1.72
VPS50-203ENST00000436177 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
VPS50-203ENST00000436177 LINC00308Q8TCZ7 52 aa4.28□□□□□ -1.72
VPS50-203ENST00000436177 C9orf92A6NGG3 77 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 TIMM17BO60830 172 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 LINC00518Q8N0U6 118 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 COPS9Q8WXC6 57 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 KRTAP4-1Q9BYQ7 146 aa4.27□□□□□ -1.73
VPS50-203ENST00000436177 IGLV8-61A0A075B6I0 122 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 SYS1-DBNDD2H3BUS1 97 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 H7C2G1 150 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 SPRR1BP22528 89 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 Q1RN00 199 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 C6orf99Q4VX62 202 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 PCOTHQ58A44 107 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
VPS50-203ENST00000436177 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
VPS50-203ENST00000436177 ELOF1P60002 83 aaKnown RBP4.25□□□□□ -1.73
VPS50-203ENST00000436177 CD164Q04900 197 aa4.25□□□□□ -1.73
VPS50-203ENST00000436177 TEX49A0A1B0GTD5 131 aa4.24□□□□□ -1.73
VPS50-203ENST00000436177 AKR1D1P51857 326 aa4.24□□□□□ -1.73
VPS50-203ENST00000436177 PET117Q6UWS5 81 aa4.24□□□□□ -1.73
VPS50-203ENST00000436177 LITAFQ99732 161 aa4.24□□□□□ -1.73
VPS50-203ENST00000436177 C20orf202A1L168 122 aa4.23□□□□□ -1.73
VPS50-203ENST00000436177 A6NDN8 102 aa4.23□□□□□ -1.73
VPS50-203ENST00000436177 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
VPS50-203ENST00000436177 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
VPS50-203ENST00000436177 TRBV7-6A0A0J9YX20 115 aa4.22□□□□□ -1.73
VPS50-203ENST00000436177 A0A1B0GWB2 263 aa4.22□□□□□ -1.73
VPS50-203ENST00000436177 F8WEM9 126 aa4.22□□□□□ -1.73
VPS50-203ENST00000436177 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
VPS50-203ENST00000436177 A4D1N5 150 aa4.21□□□□□ -1.74
VPS50-203ENST00000436177 COLCA2A8K830 154 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms