RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 IGLC3P0DOY3 106 aa6.49□□□□□ -1.37
CHRNA1-207ENST00000435083 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
CHRNA1-207ENST00000435083 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
CHRNA1-207ENST00000435083 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
CHRNA1-207ENST00000435083 LINC00158P58513 81 aa6.48□□□□□ -1.37
CHRNA1-207ENST00000435083 HERVK_113P61574 105 aa6.47□□□□□ -1.37
CHRNA1-207ENST00000435083 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
CHRNA1-207ENST00000435083 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
CHRNA1-207ENST00000435083 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
CHRNA1-207ENST00000435083 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
CHRNA1-207ENST00000435083 PRYO14603 147 aa6.45□□□□□ -1.38
CHRNA1-207ENST00000435083 SFTA2Q6UW10 78 aa6.45□□□□□ -1.38
CHRNA1-207ENST00000435083 UQCR10Q9UDW1 63 aa6.45□□□□□ -1.38
CHRNA1-207ENST00000435083 IGLV9-49A0A0B4J1Y8 123 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 MOBPQ13875 183 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 GAGE2AQ6NT46 116 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 Q8N377 158 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 MIEN1Q9BRT3 115 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 PRO1933Q9H354 126 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 NCR3O14931 201 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 XP32Q5T750 250 aa6.44□□□□□ -1.38
CHRNA1-207ENST00000435083 E9PLD3 99 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 SLC25A20O43772 301 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 COX8AP10176 69 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 DDTP30046 118 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 SPRR1AP35321 89 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 SLC25A34Q6PIV7 304 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 BOD1L2Q8IYS8 172 aa6.43□□□□□ -1.38
CHRNA1-207ENST00000435083 NMUP48645 174 aa6.42□□□□□ -1.38
CHRNA1-207ENST00000435083 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
CHRNA1-207ENST00000435083 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
CHRNA1-207ENST00000435083 SSBP3-AS1Q7Z2R9 100 aa6.42□□□□□ -1.38
CHRNA1-207ENST00000435083 KCNQ1DNQ9H478 68 aa6.42□□□□□ -1.38
CHRNA1-207ENST00000435083 DLEU1O43261 78 aa6.41□□□□□ -1.38
CHRNA1-207ENST00000435083 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.38
CHRNA1-207ENST00000435083 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
CHRNA1-207ENST00000435083 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
CHRNA1-207ENST00000435083 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.39
CHRNA1-207ENST00000435083 TMEM223A0PJW6 202 aa6.4□□□□□ -1.39
CHRNA1-207ENST00000435083 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
CHRNA1-207ENST00000435083 MT1HP80294 61 aa6.39□□□□□ -1.39
CHRNA1-207ENST00000435083 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
CHRNA1-207ENST00000435083 B5MCH6 92 aa6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 LEPROTO15243 131 aa6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 LGALS3P17931 250 aaKnown RBP6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
CHRNA1-207ENST00000435083 MYMXA0A1B0GTQ4 84 aa6.36□□□□□ -1.39
CHRNA1-207ENST00000435083 J3QQQ9 107 aa6.36□□□□□ -1.39
CHRNA1-207ENST00000435083 PCP2Q8IVA1 136 aa6.36□□□□□ -1.39
CHRNA1-207ENST00000435083 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 ZNF815PA8K554 130 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 C9orf153Q5TBE3 101 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 HIGD1BQ9P298 99 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 Q9BRP9 147 aa6.35□□□□□ -1.39
CHRNA1-207ENST00000435083 M0R143 59 aa6.34□□□□□ -1.39
CHRNA1-207ENST00000435083 HERV-K104P63124 156 aa6.34□□□□□ -1.39
CHRNA1-207ENST00000435083 Q6ZRX8 168 aa6.33□□□□□ -1.4
CHRNA1-207ENST00000435083 HSD52Q0P140 79 aa6.32□□□□□ -1.4
CHRNA1-207ENST00000435083 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
CHRNA1-207ENST00000435083 C9orf92A6NGG3 77 aa6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 TSPEAR-AS2P59090 65 aa6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 TAL2Q16559 108 aa6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 TTTY13Q9BZ97 58 aa6.31□□□□□ -1.4
CHRNA1-207ENST00000435083 TRBV10-2A0A0K0K1G8 114 aa6.29□□□□□ -1.4
CHRNA1-207ENST00000435083 M0R2T5 61 aa6.29□□□□□ -1.4
CHRNA1-207ENST00000435083 TIMM17BO60830 172 aa6.29□□□□□ -1.4
CHRNA1-207ENST00000435083 HIST1H4GQ99525 98 aa6.29□□□□□ -1.4
CHRNA1-207ENST00000435083 SPANXB1Q9NS25 103 aaPredicted RBP6.29□□□□□ -1.4
CHRNA1-207ENST00000435083 S100A7L2Q5SY68 101 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 HRCT1Q6UXD1 115 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 Q6ZVH6 145 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 COPS9Q8WXC6 57 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
CHRNA1-207ENST00000435083 LOC107984156A0A0G2JMH3 177 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 A0A0J9YXY3 114 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 A6NJY4 79 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 HINT1P49773 126 aaPredicted RBP6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 ARL17AQ8IVW1 177 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 A6NDN8 102 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 BATFQ16520 125 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 BVES-AS1Q5T3Y7 98 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 CEND1Q8N111 149 aa6.27□□□□□ -1.41
CHRNA1-207ENST00000435083 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
CHRNA1-207ENST00000435083 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
CHRNA1-207ENST00000435083 IGLV6-57P01721 117 aa6.25□□□□□ -1.41
CHRNA1-207ENST00000435083 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
CHRNA1-207ENST00000435083 SPANXCQ9NY87 97 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms