RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 COX7BP24311 80 aa12.15□□□□□ -0.46
FAM3A-212ENST00000434658 ELOF1P60002 83 aaKnown RBP12.15□□□□□ -0.46
FAM3A-212ENST00000434658 Q6ZQY7 126 aa12.15□□□□□ -0.46
FAM3A-212ENST00000434658 Q6ZRP5 223 aa12.14□□□□□ -0.47
FAM3A-212ENST00000434658 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
FAM3A-212ENST00000434658 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
FAM3A-212ENST00000434658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-212ENST00000434658 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
FAM3A-212ENST00000434658 RBM3P98179 157 aaKnown RBP12.12□□□□□ -0.47
FAM3A-212ENST00000434658 VPS13DQ5THJ4 4388 aa12.12□□□□□ -0.47
FAM3A-212ENST00000434658 HIST1H4AP62805 103 aaKnown RBP12.11□□□□□ -0.47
FAM3A-212ENST00000434658 Q6ZQT0 140 aa12.11□□□□□ -0.47
FAM3A-212ENST00000434658 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
FAM3A-212ENST00000434658 IGKV3D-7A0A0C4DH55 119 aa12.1□□□□□ -0.47
FAM3A-212ENST00000434658 B5MCH6 92 aa12.09□□□□□ -0.47
FAM3A-212ENST00000434658 GHRHP01286 108 aa12.09□□□□□ -0.47
FAM3A-212ENST00000434658 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
FAM3A-212ENST00000434658 ATP5EP2Q5VTU8 51 aa12.08□□□□□ -0.48
FAM3A-212ENST00000434658 KMT2AQ03164 3969 aa12.08□□□□□ -0.48
FAM3A-212ENST00000434658 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
FAM3A-212ENST00000434658 PDE6GP18545 87 aa12.06□□□□□ -0.48
FAM3A-212ENST00000434658 RMI2Q96E14 147 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 UBL5Q9BZL1 73 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
FAM3A-212ENST00000434658 ATOX1O00244 68 aa12.03□□□□□ -0.48
FAM3A-212ENST00000434658 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
FAM3A-212ENST00000434658 KCNQ1DNQ9H478 68 aa12.02□□□□□ -0.48
FAM3A-212ENST00000434658 DNAH6Q9C0G6 4158 aa12.02□□□□□ -0.49
FAM3A-212ENST00000434658 M0R2N4 97 aa12.02□□□□□ -0.49
FAM3A-212ENST00000434658 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
FAM3A-212ENST00000434658 C7orf33Q8WU49 177 aa12□□□□□ -0.49
FAM3A-212ENST00000434658 TRBV7-4A0A0J9YYF1 115 aa12□□□□□ -0.49
FAM3A-212ENST00000434658 C3orf22Q8N5N4 141 aa12□□□□□ -0.49
FAM3A-212ENST00000434658 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
FAM3A-212ENST00000434658 A0A087WVE0 104 aa11.99□□□□□ -0.49
FAM3A-212ENST00000434658 UQCRQO14949 82 aa11.99□□□□□ -0.49
FAM3A-212ENST00000434658 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
FAM3A-212ENST00000434658 COX7CP15954 63 aa11.96□□□□□ -0.49
FAM3A-212ENST00000434658 Q6ZR54 194 aa11.96□□□□□ -0.49
FAM3A-212ENST00000434658 NBDYA0A0U1RRE5 68 aa11.95□□□□□ -0.5
FAM3A-212ENST00000434658 PRYO14603 147 aa11.93□□□□□ -0.5
FAM3A-212ENST00000434658 C9orf153Q5TBE3 101 aa11.93□□□□□ -0.5
FAM3A-212ENST00000434658 Q6ZVQ6 151 aa11.93□□□□□ -0.5
FAM3A-212ENST00000434658 IGLV1-50A0A075B6I6 118 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 FAM168BA1KXE4 195 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 FAM19A1Q7Z5A9 133 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 LOC107984640A0A0U1RRK4 108 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 KRTAP4-16G5E9R7 235 aaPredicted RBP11.9□□□□□ -0.5
FAM3A-212ENST00000434658 SPRR1AP35321 89 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 LINC01547P58512 204 aaPredicted RBP11.9□□□□□ -0.5
FAM3A-212ENST00000434658 KRTAP7-1Q8IUC3 87 aa11.9□□□□□ -0.5
FAM3A-212ENST00000434658 Q6ZRX8 168 aa11.89□□□□□ -0.51
FAM3A-212ENST00000434658 DHRS4-AS1Q9P1J3 65 aa11.89□□□□□ -0.51
FAM3A-212ENST00000434658 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
FAM3A-212ENST00000434658 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
FAM3A-212ENST00000434658 RPL37AP8A6NKH3 93 aa11.87□□□□□ -0.51
FAM3A-212ENST00000434658 CXCL6P80162 114 aa11.87□□□□□ -0.51
FAM3A-212ENST00000434658 DNAH10Q8IVF4 4471 aa11.87□□□□□ -0.51
FAM3A-212ENST00000434658 CRYGAP11844 174 aa11.86□□□□□ -0.51
FAM3A-212ENST00000434658 RTL8CO15255 209 aa11.86□□□□□ -0.51
FAM3A-212ENST00000434658 DNAH2Q9P225 4427 aa11.85□□□□□ -0.51
FAM3A-212ENST00000434658 HAMPP81172 84 aa11.85□□□□□ -0.51
FAM3A-212ENST00000434658 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
FAM3A-212ENST00000434658 Q8N377 158 aa11.85□□□□□ -0.51
FAM3A-212ENST00000434658 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
FAM3A-212ENST00000434658 Q9BRP9 147 aa11.83□□□□□ -0.51
FAM3A-212ENST00000434658 FAM19A5Q7Z5A7 132 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-212ENST00000434658 FRAS1Q86XX4 4008 aa11.83□□□□□ -0.52
FAM3A-212ENST00000434658 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
FAM3A-212ENST00000434658 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
FAM3A-212ENST00000434658 DEFB105AQ8NG35 78 aa11.81□□□□□ -0.52
FAM3A-212ENST00000434658 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
FAM3A-212ENST00000434658 BCE1O60756 84 aa11.79□□□□□ -0.52
FAM3A-212ENST00000434658 EPPK1P58107 5090 aaKnown RBP11.78□□□□□ -0.52
FAM3A-212ENST00000434658 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
FAM3A-212ENST00000434658 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
FAM3A-212ENST00000434658 PSCAO43653 123 aa11.75□□□□□ -0.53
FAM3A-212ENST00000434658 REG3GQ6UW15 175 aa11.75□□□□□ -0.53
FAM3A-212ENST00000434658 A0A096LNI7 61 aa11.74□□□□□ -0.53
FAM3A-212ENST00000434658 TNP2Q05952 138 aa11.74□□□□□ -0.53
FAM3A-212ENST00000434658 FAT2Q9NYQ8 4349 aa11.74□□□□□ -0.53
FAM3A-212ENST00000434658 Q6ZRN7 208 aaPredicted RBP11.74□□□□□ -0.53
FAM3A-212ENST00000434658 C14orf177Q52M58 125 aa11.73□□□□□ -0.53
FAM3A-212ENST00000434658 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
FAM3A-212ENST00000434658 A0A1B0GW54 56 aa11.72□□□□□ -0.53
FAM3A-212ENST00000434658 ERC2-IT1O76042 136 aa11.72□□□□□ -0.53
FAM3A-212ENST00000434658 UBE2BP63146 152 aa11.72□□□□□ -0.53
FAM3A-212ENST00000434658 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
FAM3A-212ENST00000434658 CYSTM1Q9H1C7 97 aa11.72□□□□□ -0.53
FAM3A-212ENST00000434658 A0A1B0GVY2 172 aa11.71□□□□□ -0.54
FAM3A-212ENST00000434658 SMIM20Q8N5G0 67 aa11.7□□□□□ -0.54
FAM3A-212ENST00000434658 NREPQ16612 68 aa11.7□□□□□ -0.54
FAM3A-212ENST00000434658 TRAV7A0A075B6U4 112 aa11.69□□□□□ -0.54
FAM3A-212ENST00000434658 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
FAM3A-212ENST00000434658 A0A1W2PNN7 141 aa11.69□□□□□ -0.54
FAM3A-212ENST00000434658 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms