RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 PKHD1L1Q86WI1 4243 aa9.43□□□□□ -0.9
HLA-DQB1-205ENST00000434651 Q5XG85 94 aa9.43□□□□□ -0.9
HLA-DQB1-205ENST00000434651 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
HLA-DQB1-205ENST00000434651 CEND1Q8N111 149 aa9.43□□□□□ -0.9
HLA-DQB1-205ENST00000434651 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
HLA-DQB1-205ENST00000434651 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
HLA-DQB1-205ENST00000434651 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
HLA-DQB1-205ENST00000434651 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
HLA-DQB1-205ENST00000434651 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQB1-205ENST00000434651 SCGB1C2P0DMR2 95 aa9.4□□□□□ -0.9
HLA-DQB1-205ENST00000434651 C1orf195Q5TG92 126 aa9.4□□□□□ -0.9
HLA-DQB1-205ENST00000434651 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
HLA-DQB1-205ENST00000434651 IGKV2D-26A0A0A0MRZ7 120 aa9.39□□□□□ -0.91
HLA-DQB1-205ENST00000434651 FXYD2P54710 66 aa9.39□□□□□ -0.91
HLA-DQB1-205ENST00000434651 Q8NDZ9 215 aa9.39□□□□□ -0.91
HLA-DQB1-205ENST00000434651 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
HLA-DQB1-205ENST00000434651 LEPROTO15243 131 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 J3QQQ9 107 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 C4orf26Q17RF5 130 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
HLA-DQB1-205ENST00000434651 COX7CP15954 63 aa9.37□□□□□ -0.91
HLA-DQB1-205ENST00000434651 HRCT1Q6UXD1 115 aa9.37□□□□□ -0.91
HLA-DQB1-205ENST00000434651 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
HLA-DQB1-205ENST00000434651 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
HLA-DQB1-205ENST00000434651 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB1-205ENST00000434651 LINC00158P58513 81 aa9.35□□□□□ -0.91
HLA-DQB1-205ENST00000434651 DAND5Q8N907 189 aa9.35□□□□□ -0.91
HLA-DQB1-205ENST00000434651 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
HLA-DQB1-205ENST00000434651 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
HLA-DQB1-205ENST00000434651 TRACP01848 142 aa9.34□□□□□ -0.91
HLA-DQB1-205ENST00000434651 HERVK_113P61574 105 aa9.34□□□□□ -0.91
HLA-DQB1-205ENST00000434651 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
HLA-DQB1-205ENST00000434651 NDUFC2O95298 119 aa9.33□□□□□ -0.92
HLA-DQB1-205ENST00000434651 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
HLA-DQB1-205ENST00000434651 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
HLA-DQB1-205ENST00000434651 MYMXA0A1B0GTQ4 84 aa9.32□□□□□ -0.92
HLA-DQB1-205ENST00000434651 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB1-205ENST00000434651 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB1-205ENST00000434651 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB1-205ENST00000434651 ACYP1P07311 99 aa9.31□□□□□ -0.92
HLA-DQB1-205ENST00000434651 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
HLA-DQB1-205ENST00000434651 COX17Q14061 63 aa9.31□□□□□ -0.92
HLA-DQB1-205ENST00000434651 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
HLA-DQB1-205ENST00000434651 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
HLA-DQB1-205ENST00000434651 HERC1Q15751 4861 aa9.3□□□□□ -0.92
HLA-DQB1-205ENST00000434651 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
HLA-DQB1-205ENST00000434651 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
HLA-DQB1-205ENST00000434651 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
HLA-DQB1-205ENST00000434651 RPL37AP8A6NKH3 93 aa9.29□□□□□ -0.92
HLA-DQB1-205ENST00000434651 CD164Q04900 197 aa9.29□□□□□ -0.92
HLA-DQB1-205ENST00000434651 K7ERJ3 54 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 ATOX1O00244 68 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 VPREB1P12018 145 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 NPC2P61916 151 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 LINC00167Q96N53 147 aa9.28□□□□□ -0.92
HLA-DQB1-205ENST00000434651 UBE2BP63146 152 aa9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
HLA-DQB1-205ENST00000434651 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
HLA-DQB1-205ENST00000434651 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
HLA-DQB1-205ENST00000434651 LITAFQ99732 161 aa9.26□□□□□ -0.93
HLA-DQB1-205ENST00000434651 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB1-205ENST00000434651 IGLV5-37A0A075B6J1 123 aa9.24□□□□□ -0.93
HLA-DQB1-205ENST00000434651 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
HLA-DQB1-205ENST00000434651 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
HLA-DQB1-205ENST00000434651 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
HLA-DQB1-205ENST00000434651 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
HLA-DQB1-205ENST00000434651 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
HLA-DQB1-205ENST00000434651 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
HLA-DQB1-205ENST00000434651 NKAPP1Q8N9T2 125 aa9.23□□□□□ -0.93
HLA-DQB1-205ENST00000434651 NCR3O14931 201 aa9.22□□□□□ -0.93
HLA-DQB1-205ENST00000434651 TNXBP22105 4242 aa9.22□□□□□ -0.93
HLA-DQB1-205ENST00000434651 SLC25A20O43772 301 aa9.21□□□□□ -0.93
HLA-DQB1-205ENST00000434651 HIST1H4AP62805 103 aaKnown RBP9.21□□□□□ -0.93
HLA-DQB1-205ENST00000434651 PSMB2P49721 201 aa9.2□□□□□ -0.94
HLA-DQB1-205ENST00000434651 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
HLA-DQB1-205ENST00000434651 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
HLA-DQB1-205ENST00000434651 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
HLA-DQB1-205ENST00000434651 IGLV1-50A0A075B6I6 118 aa9.19□□□□□ -0.94
HLA-DQB1-205ENST00000434651 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
HLA-DQB1-205ENST00000434651 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
HLA-DQB1-205ENST00000434651 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
HLA-DQB1-205ENST00000434651 SMIM26A0A096LP01 95 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 OXTP01178 125 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 PMAIP1Q13794 54 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 SCGB1D4Q6XE38 83 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 LINC00308Q8TCZ7 52 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 H3BT86 120 aa9.16□□□□□ -0.94
HLA-DQB1-205ENST00000434651 M0R378 163 aa9.15□□□□□ -0.94
HLA-DQB1-205ENST00000434651 TCL1BO95988 128 aa9.15□□□□□ -0.94
HLA-DQB1-205ENST00000434651 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms