RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 Q6ZTC4 211 aa4.94□□□□□ -1.62
COL17A1-204ENST00000433822 WFDC10BQ8IUB3 73 aa4.94□□□□□ -1.62
COL17A1-204ENST00000433822 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
COL17A1-204ENST00000433822 LOC110117498A0A087WWA1 95 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 NDUFC2-KCTD14E9PQ53 114 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 HIST1H4AP62805 103 aaKnown RBP4.93□□□□□ -1.62
COL17A1-204ENST00000433822 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
COL17A1-204ENST00000433822 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
COL17A1-204ENST00000433822 C6orf223Q8N319 242 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 DIRC1Q969H9 104 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 C1orf43Q9BWL3 253 aa4.93□□□□□ -1.62
COL17A1-204ENST00000433822 TRAV23DV6A0A075B6W5 121 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 TRAV10A0A0B4J240 114 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 M0R378 163 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 NCR3O14931 201 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 VPREB1P12018 145 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 ESRGQ1W209 222 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 Q8NDZ9 215 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 C11orf45Q8TAV5 145 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 CAMK2N2Q96S95 79 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 CSMD3Q7Z407 3707 aa4.92□□□□□ -1.62
COL17A1-204ENST00000433822 STAB2Q8WWQ8 2551 aa4.91□□□□□ -1.62
COL17A1-204ENST00000433822 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
COL17A1-204ENST00000433822 C9orf129Q5T035 196 aaKnown RBP4.91□□□□□ -1.62
COL17A1-204ENST00000433822 TM2D3Q9BRN9 247 aa4.91□□□□□ -1.62
COL17A1-204ENST00000433822 ATOX1O00244 68 aa4.9□□□□□ -1.63
COL17A1-204ENST00000433822 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
COL17A1-204ENST00000433822 RPL18AQ02543 176 aaKnown RBP4.9□□□□□ -1.63
COL17A1-204ENST00000433822 RMI2Q96E14 147 aa4.9□□□□□ -1.63
COL17A1-204ENST00000433822 UPK3BQ9BT76 320 aa4.9□□□□□ -1.63
COL17A1-204ENST00000433822 RETNQ9HD89 108 aa4.9□□□□□ -1.63
COL17A1-204ENST00000433822 LINC00846Q9NV44 126 aa4.9□□□□□ -1.63
COL17A1-204ENST00000433822 IGLV5-37A0A075B6J1 123 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 FAM236AA0A1B0GUQ0 79 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 FAM236BA0A1B0GV22 79 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
COL17A1-204ENST00000433822 BCE1O60756 84 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 COX7BP24311 80 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
COL17A1-204ENST00000433822 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 Q6ZQT0 140 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 Q6ZRU5 148 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 LYSTQ99698 3801 aa4.89□□□□□ -1.63
COL17A1-204ENST00000433822 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
COL17A1-204ENST00000433822 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 A0A1B0GW54 56 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 UQCRQO14949 82 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 MRAPQ8TCY5 172 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
COL17A1-204ENST00000433822 COX7CP15954 63 aa4.86□□□□□ -1.63
COL17A1-204ENST00000433822 HIGD2BQ4VC39 106 aa4.86□□□□□ -1.63
COL17A1-204ENST00000433822 Q6ZQY7 126 aa4.86□□□□□ -1.63
COL17A1-204ENST00000433822 DSCR8Q96T75 97 aa4.86□□□□□ -1.63
COL17A1-204ENST00000433822 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
COL17A1-204ENST00000433822 IGKV2D-24A0A075B6R9 120 aa4.85□□□□□ -1.63
COL17A1-204ENST00000433822 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
COL17A1-204ENST00000433822 PRYO14603 147 aa4.85□□□□□ -1.63
COL17A1-204ENST00000433822 C3orf22Q8N5N4 141 aa4.85□□□□□ -1.63
COL17A1-204ENST00000433822 SPRR1AP35321 89 aa4.84□□□□□ -1.63
COL17A1-204ENST00000433822 CXCL6P80162 114 aa4.84□□□□□ -1.63
COL17A1-204ENST00000433822 Q6ZRP5 223 aa4.84□□□□□ -1.63
COL17A1-204ENST00000433822 LAMTOR3Q9UHA4 124 aa4.84□□□□□ -1.63
COL17A1-204ENST00000433822 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
COL17A1-204ENST00000433822 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 STARD9Q9P2P6 4700 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 B5MCH6 92 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 CRYGAP11844 174 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 DHRS4-AS1Q9P1J3 65 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 DNAH7Q8WXX0 4024 aa4.83□□□□□ -1.64
COL17A1-204ENST00000433822 KIAA1109Q2LD37 5005 aa4.82□□□□□ -1.64
COL17A1-204ENST00000433822 SMIM20Q8N5G0 67 aa4.82□□□□□ -1.64
COL17A1-204ENST00000433822 SERP2Q8N6R1 65 aa4.82□□□□□ -1.64
COL17A1-204ENST00000433822 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
COL17A1-204ENST00000433822 IGKV3D-7A0A0C4DH55 119 aa4.81□□□□□ -1.64
COL17A1-204ENST00000433822 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
COL17A1-204ENST00000433822 USP17L23D6RBM5 183 aa4.81□□□□□ -1.64
COL17A1-204ENST00000433822 KRTAP4-16G5E9R7 235 aaPredicted RBP4.81□□□□□ -1.64
COL17A1-204ENST00000433822 K7EIL1 84 aa4.81□□□□□ -1.64
COL17A1-204ENST00000433822 PKIGQ9Y2B9 76 aa4.81□□□□□ -1.64
COL17A1-204ENST00000433822 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 IGLV5-48A0A075B6I7 105 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 Q6ZRX8 168 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 Q6ZVQ6 151 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
COL17A1-204ENST00000433822 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
COL17A1-204ENST00000433822 C14orf177Q52M58 125 aa4.79□□□□□ -1.64
COL17A1-204ENST00000433822 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
COL17A1-204ENST00000433822 PLECQ15149 4684 aaKnown RBP4.78□□□□□ -1.64
COL17A1-204ENST00000433822 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
COL17A1-204ENST00000433822 SERTAD4-AS1Q5TG53 156 aa4.78□□□□□ -1.64
COL17A1-204ENST00000433822 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms