RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 LOC107984156A0A0G2JMH3 177 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 HSBP1O75506 76 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 TSPEAR-AS2P59090 65 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 ARL17AQ8IVW1 177 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 FAM19A2Q8N3H0 131 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 DAND5Q8N907 189 aa5.33□□□□□ -1.56
CDC42-IT1-201ENST00000431803 SPINK1P00995 79 aa5.32□□□□□ -1.56
CDC42-IT1-201ENST00000431803 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
CDC42-IT1-201ENST00000431803 MAP1LC3CQ9BXW4 147 aa5.32□□□□□ -1.56
CDC42-IT1-201ENST00000431803 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
CDC42-IT1-201ENST00000431803 TRIAP1O43715 76 aa5.31□□□□□ -1.56
CDC42-IT1-201ENST00000431803 H0Y8G0 127 aa5.3□□□□□ -1.56
CDC42-IT1-201ENST00000431803 LEPROTO15243 131 aa5.3□□□□□ -1.56
CDC42-IT1-201ENST00000431803 ERC2-IT1O76042 136 aa5.3□□□□□ -1.56
CDC42-IT1-201ENST00000431803 PLNP26678 52 aa5.3□□□□□ -1.56
CDC42-IT1-201ENST00000431803 Q9BRP9 147 aa5.3□□□□□ -1.56
CDC42-IT1-201ENST00000431803 J3QQQ9 107 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 SERF1AO75920 110 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 TRGC2P03986 189 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 DDTP30046 118 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 S100A12P80511 92 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 GAGE2AQ6NT46 116 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 Q6ZRX8 168 aa5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 SPANXB1Q9NS25 103 aaPredicted RBP5.29□□□□□ -1.56
CDC42-IT1-201ENST00000431803 NDUFC2O95298 119 aa5.28□□□□□ -1.56
CDC42-IT1-201ENST00000431803 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
CDC42-IT1-201ENST00000431803 NMUP48645 174 aa5.28□□□□□ -1.56
CDC42-IT1-201ENST00000431803 MOBPQ13875 183 aa5.28□□□□□ -1.56
CDC42-IT1-201ENST00000431803 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
CDC42-IT1-201ENST00000431803 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 DPM2O94777 84 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 Q8N377 158 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 MIEN1Q9BRT3 115 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
CDC42-IT1-201ENST00000431803 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
CDC42-IT1-201ENST00000431803 HERVK_113P61574 105 aa5.26□□□□□ -1.57
CDC42-IT1-201ENST00000431803 PMCHL2Q9BQD1 86 aa5.26□□□□□ -1.57
CDC42-IT1-201ENST00000431803 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
CDC42-IT1-201ENST00000431803 IGKCP01834 107 aa5.25□□□□□ -1.57
CDC42-IT1-201ENST00000431803 LGALS3P17931 250 aaKnown RBP5.25□□□□□ -1.57
CDC42-IT1-201ENST00000431803 S100A7L2Q5SY68 101 aa5.25□□□□□ -1.57
CDC42-IT1-201ENST00000431803 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
CDC42-IT1-201ENST00000431803 SLC25A20O43772 301 aa5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 FABP4P15090 132 aa5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 JOSD1Q15040 202 aaPredicted RBP5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 ADAMTSL4-AS1Q5T5F5 129 aa5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
CDC42-IT1-201ENST00000431803 A0A0J9YXY3 114 aa5.23□□□□□ -1.57
CDC42-IT1-201ENST00000431803 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
CDC42-IT1-201ENST00000431803 E9PLD3 99 aa5.22□□□□□ -1.57
CDC42-IT1-201ENST00000431803 COLCA2A8K830 154 aa5.21□□□□□ -1.58
CDC42-IT1-201ENST00000431803 NPC2P61916 151 aa5.21□□□□□ -1.58
CDC42-IT1-201ENST00000431803 C9orf153Q5TBE3 101 aa5.21□□□□□ -1.58
CDC42-IT1-201ENST00000431803 ST20-AS1Q8NBB2 130 aa5.21□□□□□ -1.58
CDC42-IT1-201ENST00000431803 LITAFQ99732 161 aa5.21□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SPANXCQ9NY87 97 aa5.2□□□□□ -1.58
CDC42-IT1-201ENST00000431803 CBY1Q9Y3M2 126 aa5.2□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SYS1-DBNDD2H3BUS1 97 aa5.19□□□□□ -1.58
CDC42-IT1-201ENST00000431803 TIMM17BO60830 172 aa5.19□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SPRR1BP22528 89 aa5.19□□□□□ -1.58
CDC42-IT1-201ENST00000431803 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
CDC42-IT1-201ENST00000431803 LINC01547P58512 204 aaPredicted RBP5.18□□□□□ -1.58
CDC42-IT1-201ENST00000431803 LINC01545Q5VT33 79 aa5.17□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SPANXDQ9BXN6 97 aa5.17□□□□□ -1.58
CDC42-IT1-201ENST00000431803 DHRS4-AS1Q9P1J3 65 aa5.17□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BKO60814 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BJP06899 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BOP23527 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BBP33778 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BDP58876 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BCP62807 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST2H2BEQ16778 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SLC25A34Q6PIV7 304 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 SLC7A5P1Q8MH63 180 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BHQ93079 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BNQ99877 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 HIST1H2BMQ99879 126 aa5.16□□□□□ -1.58
CDC42-IT1-201ENST00000431803 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
CDC42-IT1-201ENST00000431803 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
CDC42-IT1-201ENST00000431803 LIMD2Q9BT23 127 aa5.15□□□□□ -1.59
CDC42-IT1-201ENST00000431803 ZNF815PA8K554 130 aa5.14□□□□□ -1.59
CDC42-IT1-201ENST00000431803 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
CDC42-IT1-201ENST00000431803 COX7BP24311 80 aa5.13□□□□□ -1.59
CDC42-IT1-201ENST00000431803 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
CDC42-IT1-201ENST00000431803 C6orf99Q4VX62 202 aa5.13□□□□□ -1.59
CDC42-IT1-201ENST00000431803 LINC00518Q8N0U6 118 aa5.13□□□□□ -1.59
CDC42-IT1-201ENST00000431803 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
CDC42-IT1-201ENST00000431803 TRBV7-6A0A0J9YX20 115 aa5.12□□□□□ -1.59
CDC42-IT1-201ENST00000431803 CD164Q04900 197 aa5.12□□□□□ -1.59
CDC42-IT1-201ENST00000431803 HRCT1Q6UXD1 115 aa5.12□□□□□ -1.59
CDC42-IT1-201ENST00000431803 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
CDC42-IT1-201ENST00000431803 C3orf79P0CE67 100 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms