RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ESRGQ1W209 222 aa7.46□□□□□ -1.21
USP4-205ENST00000431357 RETNQ9HD89 108 aa7.45□□□□□ -1.22
USP4-205ENST00000431357 NOTCH2Q04721 2471 aa7.45□□□□□ -1.22
USP4-205ENST00000431357 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
USP4-205ENST00000431357 IGKV2D-24A0A075B6R9 120 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 Q6ZRP5 223 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 VWFP04275 2813 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 F8WEM9 126 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 KRTAP10-11P60412 298 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
USP4-205ENST00000431357 KCNQ1DNQ9H478 68 aa7.42□□□□□ -1.22
USP4-205ENST00000431357 DEFB131BA0A096LNP1 70 aa7.42□□□□□ -1.22
USP4-205ENST00000431357 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
USP4-205ENST00000431357 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
USP4-205ENST00000431357 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
USP4-205ENST00000431357 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
USP4-205ENST00000431357 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
USP4-205ENST00000431357 DNAH10OSP0CZ25 163 aa7.4□□□□□ -1.23
USP4-205ENST00000431357 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
USP4-205ENST00000431357 NSD1Q96L73 2696 aaPredicted RBP7.38□□□□□ -1.23
USP4-205ENST00000431357 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
USP4-205ENST00000431357 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
USP4-205ENST00000431357 A0A1B0GW54 56 aa7.37□□□□□ -1.23
USP4-205ENST00000431357 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
USP4-205ENST00000431357 RMI2Q96E14 147 aa7.37□□□□□ -1.23
USP4-205ENST00000431357 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 NREPQ16612 68 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 PRYO14603 147 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 SERTAD4-AS1Q5TG53 156 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 SCXQ7RTU7 201 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
USP4-205ENST00000431357 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
USP4-205ENST00000431357 IGLV5-48A0A075B6I7 105 aa7.35□□□□□ -1.23
USP4-205ENST00000431357 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.23
USP4-205ENST00000431357 Q8N377 158 aa7.34□□□□□ -1.23
USP4-205ENST00000431357 HIVEP1P15822 2718 aa7.34□□□□□ -1.23
USP4-205ENST00000431357 Q1T7F1 81 aa7.34□□□□□ -1.23
USP4-205ENST00000431357 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
USP4-205ENST00000431357 ATRQ13535 2644 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 Q6ZRX8 168 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 SPRR1AP35321 89 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 DEFB105AQ8NG35 78 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
USP4-205ENST00000431357 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
USP4-205ENST00000431357 BPY2O14599 106 aa7.32□□□□□ -1.24
USP4-205ENST00000431357 ETDCA0A1B0GVM5 59 aa7.31□□□□□ -1.24
USP4-205ENST00000431357 IGKV4-1P06312 121 aa7.31□□□□□ -1.24
USP4-205ENST00000431357 FUSP35637 526 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP4-205ENST00000431357 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
USP4-205ENST00000431357 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
USP4-205ENST00000431357 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
USP4-205ENST00000431357 LINC00588Q9Y4M8 146 aa7.3□□□□□ -1.24
USP4-205ENST00000431357 TRRAPQ9Y4A5 3859 aa7.29□□□□□ -1.24
USP4-205ENST00000431357 KRTAP24-1Q3LI83 254 aa7.29□□□□□ -1.24
USP4-205ENST00000431357 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
USP4-205ENST00000431357 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
USP4-205ENST00000431357 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
USP4-205ENST00000431357 TNP2Q05952 138 aa7.28□□□□□ -1.24
USP4-205ENST00000431357 Q9BRP9 147 aa7.28□□□□□ -1.24
USP4-205ENST00000431357 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
USP4-205ENST00000431357 FAM168BA1KXE4 195 aa7.27□□□□□ -1.25
USP4-205ENST00000431357 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
USP4-205ENST00000431357 KTN1-AS1Q86SY8 53 aa7.27□□□□□ -1.25
USP4-205ENST00000431357 Q8N9L7 120 aa7.27□□□□□ -1.25
USP4-205ENST00000431357 Q8NBF4 154 aa7.26□□□□□ -1.25
USP4-205ENST00000431357 A0A1W2PNM2 257 aa7.25□□□□□ -1.25
USP4-205ENST00000431357 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
USP4-205ENST00000431357 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
USP4-205ENST00000431357 KRTAP7-1Q8IUC3 87 aa7.25□□□□□ -1.25
USP4-205ENST00000431357 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
USP4-205ENST00000431357 NDUFS5O43920 106 aa7.24□□□□□ -1.25
USP4-205ENST00000431357 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
USP4-205ENST00000431357 UBE2BP63146 152 aa7.23□□□□□ -1.25
USP4-205ENST00000431357 REG3GQ6UW15 175 aa7.23□□□□□ -1.25
USP4-205ENST00000431357 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
USP4-205ENST00000431357 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
USP4-205ENST00000431357 BAHCC1Q9P281 2608 aa7.2□□□□□ -1.26
USP4-205ENST00000431357 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
USP4-205ENST00000431357 SMIM29Q86T20 159 aa7.18□□□□□ -1.26
USP4-205ENST00000431357 FLNBO75369 2602 aaKnown RBP7.18□□□□□ -1.26
USP4-205ENST00000431357 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
USP4-205ENST00000431357 CMYA5Q8N3K9 4069 aa7.17□□□□□ -1.26
USP4-205ENST00000431357 C16orf90A8MZG2 172 aa7.17□□□□□ -1.26
USP4-205ENST00000431357 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
USP4-205ENST00000431357 PHF5AQ7RTV0 110 aaKnown RBP7.17□□□□□ -1.26
USP4-205ENST00000431357 TENM3Q9P273 2699 aa7.17□□□□□ -1.26
USP4-205ENST00000431357 LCE6AA0A183 80 aa7.16□□□□□ -1.26
USP4-205ENST00000431357 DSCR10P59022 87 aa7.16□□□□□ -1.26
USP4-205ENST00000431357 LINC00476Q8WZB0 136 aa7.16□□□□□ -1.26
USP4-205ENST00000431357 IGLV8-61A0A075B6I0 122 aa7.15□□□□□ -1.27
USP4-205ENST00000431357 K7EIL1 84 aa7.15□□□□□ -1.27
USP4-205ENST00000431357 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.27
USP4-205ENST00000431357 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
USP4-205ENST00000431357 A0A096LNI7 61 aa7.14□□□□□ -1.27
USP4-205ENST00000431357 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
USP4-205ENST00000431357 ANK2Q01484 3957 aa7.14□□□□□ -1.27
USP4-205ENST00000431357 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
USP4-205ENST00000431357 UBE2AP49459 152 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms