RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 IGLV10-54A0A075B6I4 117 aa3.48□□□□□ -1.85
PTPN4-203ENST00000430976 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
PTPN4-203ENST00000430976 DMBT1Q9UGM3 2413 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-203ENST00000430976 IGLV11-55A0A075B6I3 123 aa3.48□□□□□ -1.85
PTPN4-203ENST00000430976 CCL18P55774 89 aa3.48□□□□□ -1.85
PTPN4-203ENST00000430976 PRR9Q5T870 116 aa3.47□□□□□ -1.85
PTPN4-203ENST00000430976 IGKV4-1P06312 121 aa3.47□□□□□ -1.85
PTPN4-203ENST00000430976 DEFB133Q30KQ1 61 aa3.47□□□□□ -1.85
PTPN4-203ENST00000430976 DEFB105AQ8NG35 78 aa3.47□□□□□ -1.85
PTPN4-203ENST00000430976 RTL8CO15255 209 aa3.47□□□□□ -1.85
PTPN4-203ENST00000430976 NUPR2A6NF83 97 aa3.46□□□□□ -1.86
PTPN4-203ENST00000430976 OBSCN-AS1Q96MR7 158 aa3.46□□□□□ -1.86
PTPN4-203ENST00000430976 KALRNO60229 2985 aa3.46□□□□□ -1.86
PTPN4-203ENST00000430976 COX6A2Q02221 97 aa3.46□□□□□ -1.86
PTPN4-203ENST00000430976 IGLV7-46A0A075B6I9 117 aa3.45□□□□□ -1.86
PTPN4-203ENST00000430976 A0A1B0GVX0 72 aa3.45□□□□□ -1.86
PTPN4-203ENST00000430976 LINC01565O15544 149 aa3.45□□□□□ -1.86
PTPN4-203ENST00000430976 COL4A4P53420 1690 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-203ENST00000430976 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 PROK1P58294 105 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 I3L2K1 104 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 K7EIM0 57 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 DEFB123Q8N688 67 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 DMXL1Q9Y485 3027 aa3.44□□□□□ -1.86
PTPN4-203ENST00000430976 HECTD1Q9ULT8 2610 aa3.43□□□□□ -1.86
PTPN4-203ENST00000430976 KMT2BQ9UMN6 2715 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-203ENST00000430976 COL4A6Q14031 1691 aa3.43□□□□□ -1.86
PTPN4-203ENST00000430976 MINOS1Q5TGZ0 78 aa3.43□□□□□ -1.86
PTPN4-203ENST00000430976 SPANXA2-OT1Q8N9U9 137 aa3.43□□□□□ -1.86
PTPN4-203ENST00000430976 ITPR3Q14573 2671 aa3.43□□□□□ -1.86
PTPN4-203ENST00000430976 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
PTPN4-203ENST00000430976 BAHCC1Q9P281 2608 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 EPG5Q9HCE0 2579 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 LOC110117498A0A087WWA1 95 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 M0QY20 66 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 BOD1L1Q8NFC6 3051 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 LCE2BO14633 110 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
PTPN4-203ENST00000430976 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
PTPN4-203ENST00000430976 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
PTPN4-203ENST00000430976 C9orf163Q8N9P6 203 aa3.41□□□□□ -1.86
PTPN4-203ENST00000430976 CEP295Q9C0D2 2601 aa3.4□□□□□ -1.86
PTPN4-203ENST00000430976 POLQO75417 2590 aa3.4□□□□□ -1.86
PTPN4-203ENST00000430976 USP9YO00507 2555 aaPredicted RBP3.4□□□□□ -1.87
PTPN4-203ENST00000430976 SPINK14Q6IE38 97 aa3.4□□□□□ -1.87
PTPN4-203ENST00000430976 DMXL2Q8TDJ6 3036 aa3.4□□□□□ -1.87
PTPN4-203ENST00000430976 SPINK13Q1W4C9 94 aa3.4□□□□□ -1.87
PTPN4-203ENST00000430976 RPL37AP61513 92 aaKnown RBP3.39□□□□□ -1.87
PTPN4-203ENST00000430976 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
PTPN4-203ENST00000430976 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 C5orf56Q8N8D9 126 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 SPTY2D1-AS1A0A0U1RR47 76 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 ODF3BA8MYP8 253 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 IGLV7-43P04211 117 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 FAM104AQ969W3 186 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 LINC00959A0A1B0GUT2 108 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
PTPN4-203ENST00000430976 LRBAP50851 2863 aa3.38□□□□□ -1.87
PTPN4-203ENST00000430976 MUC22E2RYF6 1773 aaPredicted RBP3.38□□□□□ -1.87
PTPN4-203ENST00000430976 LINC00315P59091 139 aa3.38□□□□□ -1.87
PTPN4-203ENST00000430976 LINC00612Q8N6U2 182 aa3.37□□□□□ -1.87
PTPN4-203ENST00000430976 ACANP16112 2415 aa3.37□□□□□ -1.87
PTPN4-203ENST00000430976 A0A087X002 238 aa3.37□□□□□ -1.87
PTPN4-203ENST00000430976 K7EQZ3 153 aa3.37□□□□□ -1.87
PTPN4-203ENST00000430976 IGLV1-40P01703 118 aa3.37□□□□□ -1.87
PTPN4-203ENST00000430976 CNBPP62633 177 aaKnown RBP3.37□□□□□ -1.87
PTPN4-203ENST00000430976 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
PTPN4-203ENST00000430976 TEP1Q99973 2627 aaKnown RBP3.36□□□□□ -1.87
PTPN4-203ENST00000430976 ZNF861PO60384 105 aa3.36□□□□□ -1.87
PTPN4-203ENST00000430976 WWC2-AS2Q96NR7 200 aa3.35□□□□□ -1.87
PTPN4-203ENST00000430976 CELSR2Q9HCU4 2923 aa3.35□□□□□ -1.87
PTPN4-203ENST00000430976 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
PTPN4-203ENST00000430976 KCNQ1DNQ9H478 68 aa3.35□□□□□ -1.87
PTPN4-203ENST00000430976 ITPR1Q14643 2758 aa3.35□□□□□ -1.87
PTPN4-203ENST00000430976 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
PTPN4-203ENST00000430976 Q6ZSN1 163 aa3.34□□□□□ -1.87
PTPN4-203ENST00000430976 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.87
PTPN4-203ENST00000430976 COL12A1Q99715 3063 aa3.34□□□□□ -1.87
PTPN4-203ENST00000430976 TACC2O95359 2948 aa3.34□□□□□ -1.87
PTPN4-203ENST00000430976 G3V318 75 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 CCL19Q99731 98 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 MAST4O15021 2626 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 Q5W150 140 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
PTPN4-203ENST00000430976 C6orf48Q9UBA6 75 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 ATRQ13535 2644 aa3.33□□□□□ -1.88
PTPN4-203ENST00000430976 A0A096LNT2 108 aa3.32□□□□□ -1.88
PTPN4-203ENST00000430976 LAMA5O15230 3695 aa3.32□□□□□ -1.88
PTPN4-203ENST00000430976 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-203ENST00000430976 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
PTPN4-203ENST00000430976 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
PTPN4-203ENST00000430976 SPINK1P00995 79 aa3.31□□□□□ -1.88
PTPN4-203ENST00000430976 HRES1P13985 223 aa3.31□□□□□ -1.88
PTPN4-203ENST00000430976 DEFB114Q30KQ6 69 aa3.31□□□□□ -1.88
PTPN4-203ENST00000430976 RHPN1-AS1Q9BWJ2 59 aa3.31□□□□□ -1.88
PTPN4-203ENST00000430976 COX17Q14061 63 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 RNF5Q99942 180 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms