RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 HINT1P49773 126 aaPredicted RBP5.32□□□□□ -1.56
HDAC9-211ENST00000430454 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
HDAC9-211ENST00000430454 LINC00310P59036 64 aa5.3□□□□□ -1.56
HDAC9-211ENST00000430454 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
HDAC9-211ENST00000430454 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
HDAC9-211ENST00000430454 E9PLD3 99 aa5.29□□□□□ -1.56
HDAC9-211ENST00000430454 SPINK1P00995 79 aa5.29□□□□□ -1.56
HDAC9-211ENST00000430454 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-211ENST00000430454 DAND5Q8N907 189 aa5.29□□□□□ -1.56
HDAC9-211ENST00000430454 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
HDAC9-211ENST00000430454 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
HDAC9-211ENST00000430454 SYS1-DBNDD2H3BUS1 97 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 AKR1D1P51857 326 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 LINC00483Q53H64 154 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 C3orf22Q8N5N4 141 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
HDAC9-211ENST00000430454 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 C20orf202A1L168 122 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 TIMM17BO60830 172 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 Q6ZRX8 168 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 Q8NBF4 154 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 PPDPFQ9H3Y8 114 aa5.27□□□□□ -1.57
HDAC9-211ENST00000430454 ZNF73O43830 326 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BKO60814 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BJP06899 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BOP23527 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BBP33778 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BDP58876 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BCP62807 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST2H2BEQ16778 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-211ENST00000430454 SLC25A34Q6PIV7 304 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 LINC00518Q8N0U6 118 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BHQ93079 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BNQ99877 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 HIST1H2BMQ99879 126 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 SPANXCQ9NY87 97 aa5.26□□□□□ -1.57
HDAC9-211ENST00000430454 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
HDAC9-211ENST00000430454 OR13C6PQ8NH95 151 aa5.25□□□□□ -1.57
HDAC9-211ENST00000430454 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
HDAC9-211ENST00000430454 ZNF815PA8K554 130 aa5.24□□□□□ -1.57
HDAC9-211ENST00000430454 NPC2P61916 151 aa5.24□□□□□ -1.57
HDAC9-211ENST00000430454 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
HDAC9-211ENST00000430454 DHRS4-AS1Q9P1J3 65 aa5.24□□□□□ -1.57
HDAC9-211ENST00000430454 MOBPQ13875 183 aa5.23□□□□□ -1.57
HDAC9-211ENST00000430454 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
HDAC9-211ENST00000430454 LINC00308Q8TCZ7 52 aa5.23□□□□□ -1.57
HDAC9-211ENST00000430454 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
HDAC9-211ENST00000430454 V9GYY9 64 aa5.23□□□□□ -1.57
HDAC9-211ENST00000430454 SLC25A20O43772 301 aa5.22□□□□□ -1.57
HDAC9-211ENST00000430454 KRTDAPP60985 99 aa5.22□□□□□ -1.57
HDAC9-211ENST00000430454 C9orf153Q5TBE3 101 aa5.22□□□□□ -1.57
HDAC9-211ENST00000430454 SCGB1D4Q6XE38 83 aa5.22□□□□□ -1.57
HDAC9-211ENST00000430454 Q9BRP9 147 aa5.22□□□□□ -1.57
HDAC9-211ENST00000430454 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
HDAC9-211ENST00000430454 SOSTDC1Q6X4U4 206 aa5.21□□□□□ -1.58
HDAC9-211ENST00000430454 Q6ZVH6 145 aa5.21□□□□□ -1.58
HDAC9-211ENST00000430454 MUC2Q02817 5179 aa5.21□□□□□ -1.58
HDAC9-211ENST00000430454 C3orf79P0CE67 100 aa5.2□□□□□ -1.58
HDAC9-211ENST00000430454 IFITM1P13164 125 aa5.2□□□□□ -1.58
HDAC9-211ENST00000430454 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
HDAC9-211ENST00000430454 LAMTOR3Q9UHA4 124 aa5.2□□□□□ -1.58
HDAC9-211ENST00000430454 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
HDAC9-211ENST00000430454 COX7BP24311 80 aa5.19□□□□□ -1.58
HDAC9-211ENST00000430454 LITAFQ99732 161 aa5.19□□□□□ -1.58
HDAC9-211ENST00000430454 LIMD2Q9BT23 127 aa5.19□□□□□ -1.58
HDAC9-211ENST00000430454 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
HDAC9-211ENST00000430454 TAL2Q16559 108 aa5.17□□□□□ -1.58
HDAC9-211ENST00000430454 Q75L30 129 aa5.17□□□□□ -1.58
HDAC9-211ENST00000430454 A6NDN8 102 aa5.16□□□□□ -1.58
HDAC9-211ENST00000430454 SPRR1BP22528 89 aa5.16□□□□□ -1.58
HDAC9-211ENST00000430454 ELOF1P60002 83 aaKnown RBP5.16□□□□□ -1.58
HDAC9-211ENST00000430454 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
HDAC9-211ENST00000430454 Q8N377 158 aa5.16□□□□□ -1.58
HDAC9-211ENST00000430454 ST20-AS1Q8NBB2 130 aa5.16□□□□□ -1.58
HDAC9-211ENST00000430454 NHP2Q9NX24 153 aaKnown RBP5.16□□□□□ -1.58
HDAC9-211ENST00000430454 TRAV13-2A0A0B4J235 113 aa5.15□□□□□ -1.59
HDAC9-211ENST00000430454 TEX49A0A1B0GTD5 131 aa5.15□□□□□ -1.59
HDAC9-211ENST00000430454 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
HDAC9-211ENST00000430454 S100A2P29034 98 aa5.15□□□□□ -1.59
HDAC9-211ENST00000430454 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.59
HDAC9-211ENST00000430454 PRO1933Q9H354 126 aa5.14□□□□□ -1.59
HDAC9-211ENST00000430454 FAT4Q6V0I7 4981 aa5.14□□□□□ -1.59
HDAC9-211ENST00000430454 LCE2BO14633 110 aa5.13□□□□□ -1.59
HDAC9-211ENST00000430454 CD164Q04900 197 aa5.13□□□□□ -1.59
HDAC9-211ENST00000430454 DEFB105AQ8NG35 78 aa5.13□□□□□ -1.59
HDAC9-211ENST00000430454 TTTY13Q9BZ97 58 aa5.13□□□□□ -1.59
HDAC9-211ENST00000430454 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
HDAC9-211ENST00000430454 ASB16-AS1Q495Z4 193 aa5.12□□□□□ -1.59
HDAC9-211ENST00000430454 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
HDAC9-211ENST00000430454 A0A1B0GV72 72 aa5.11□□□□□ -1.59
HDAC9-211ENST00000430454 H7C2G1 150 aa5.11□□□□□ -1.59
HDAC9-211ENST00000430454 ATOH7Q8N100 152 aa5.11□□□□□ -1.59
HDAC9-211ENST00000430454 F8WEM9 126 aa5.1□□□□□ -1.59
HDAC9-211ENST00000430454 PCP2Q8IVA1 136 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms