RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TOMM6Q96B49 74 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 AMELXQ99217 191 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 TMEM14CQ9P0S9 112 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 IGHV1-3A0A0C4DH29 117 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 C8orf87E5RJ46 101 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 M0R378 163 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 COX7A2LO14548 114 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 UBE2L6O14933 153 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 SH2D1AO60880 128 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 NDUFA3O95167 84 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 DNAL4O96015 105 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 SS18Q15532 418 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 C10orf113Q5VZT2 155 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 LINC00337Q8N6G1 96 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 OBSCN-AS1Q96MR7 158 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 SCGB3A1Q96QR1 104 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 SORL1Q92673 2214 aa2.51□□□□□ -2.01
HMGB3-203ENST00000430118 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
HMGB3-203ENST00000430118 IGIPA6NJ69 53 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 E7EUB6 86 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 H3BUA1 57 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 LEPROTO15243 131 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 ZNF73O43830 326 aaPredicted RBP2.5□□□□□ -2.01
HMGB3-203ENST00000430118 TRGV3P03979 118 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 MIFP14174 115 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 ZNF80P51504 273 aaPredicted RBP2.5□□□□□ -2.01
HMGB3-203ENST00000430118 PRCDQ00LT1 54 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 DEFB135Q30KP9 77 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 LYZL1Q6UWQ5 148 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 UNQ9165/PRO28630Q6UXU0 137 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 LCA10Q71F78 164 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 UBE2DNLQ8IWF7 75 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 Q8N6K4 173 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 RNF5Q99942 180 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 SMIM2Q9BVW6 85 aa2.5□□□□□ -2.01
HMGB3-203ENST00000430118 C11orf68Q9H3H3 251 aaKnown RBP2.5□□□□□ -2.01
HMGB3-203ENST00000430118 DMBT1Q9UGM3 2413 aaPredicted RBP2.49□□□□□ -2.01
HMGB3-203ENST00000430118 MUC4Q99102 2169 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 IGKV1OR2-108A0A075B7D4 117 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 F8WEM9 126 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 G3V318 75 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 M0R381 172 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 M0R3E3 92 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 PPP1R17O96001 155 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 LINC00474Q9P2X8 69 aa2.49□□□□□ -2.01
HMGB3-203ENST00000430118 TRAV10A0A0B4J240 114 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 I3L3M4 83 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 TMEM256-PLSCR3K7ERE1 68 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 RTL8CO15255 209 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 FXYD7P58549 80 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 PDE6HQ13956 83 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 MIAQ16674 131 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 C1orf134Q5TEV5 83 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 PATE2Q6UY27 113 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 ATP11AUNQ6ZP68 121 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 C7orf65Q6ZTY9 151 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 MUSTN1Q8IVN3 82 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 DIRC1Q969H9 104 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 KLK12Q9UKR0 248 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
HMGB3-203ENST00000430118 IGLV4-60A0A075B6I1 120 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 A0A087WVE0 104 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 TRAV8-3A0A0A6YYJ7 113 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 M0R2N4 97 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 RNASE4P34096 147 aaKnown RBP2.47□□□□□ -2.01
HMGB3-203ENST00000430118 TSPEAR-AS2P59090 65 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 SPINK9Q5DT21 86 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 CLEC2BQ92478 149 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 LEAP2Q969E1 77 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 USMG5Q96IX5 58 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 WFDC10AQ9H1F0 79 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 APLNQ9ULZ1 77 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 C22orf24Q9Y442 160 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
HMGB3-203ENST00000430118 IGKV1D-37A0A075B6S9 117 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 IGKV3D-7A0A0C4DH55 119 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 A6NN06 94 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 BAALC-AS2P0C853 105 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 RPL28P46779 137 aaKnown RBP2.46□□□□□ -2.02
HMGB3-203ENST00000430118 CRIP1P50238 77 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 ASB16-AS1Q495Z4 193 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 ZNF833PQ6ZTB9 187 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 CYP4F30PQ9H0H9 118 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 LINC00574Q9H8X3 128 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
HMGB3-203ENST00000430118 hDV103S1A0JD37 113 aa2.45□□□□□ -2.02
HMGB3-203ENST00000430118 A8MUN3 132 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms