RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
PTCH1-207ENST00000429896 SMIM29Q86T20 159 aa8.67□□□□□ -1.02
PTCH1-207ENST00000429896 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
PTCH1-207ENST00000429896 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
PTCH1-207ENST00000429896 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
PTCH1-207ENST00000429896 ATRQ13535 2644 aa8.65□□□□□ -1.02
PTCH1-207ENST00000429896 SMIM26A0A096LP01 95 aa8.65□□□□□ -1.03
PTCH1-207ENST00000429896 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.03
PTCH1-207ENST00000429896 LIMD2Q9BT23 127 aa8.64□□□□□ -1.03
PTCH1-207ENST00000429896 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
PTCH1-207ENST00000429896 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
PTCH1-207ENST00000429896 MAST4O15021 2626 aa8.62□□□□□ -1.03
PTCH1-207ENST00000429896 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
PTCH1-207ENST00000429896 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
PTCH1-207ENST00000429896 FRYLO94915 3013 aa8.61□□□□□ -1.03
PTCH1-207ENST00000429896 A0A087WTM6 91 aa8.61□□□□□ -1.03
PTCH1-207ENST00000429896 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
PTCH1-207ENST00000429896 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
PTCH1-207ENST00000429896 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
PTCH1-207ENST00000429896 FLNCQ14315 2725 aa8.59□□□□□ -1.03
PTCH1-207ENST00000429896 GCN1Q92616 2671 aaKnown RBP8.59□□□□□ -1.03
PTCH1-207ENST00000429896 TEP1Q99973 2627 aaKnown RBP8.59□□□□□ -1.03
PTCH1-207ENST00000429896 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-207ENST00000429896 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
PTCH1-207ENST00000429896 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
PTCH1-207ENST00000429896 TMEM254Q8TBM7 123 aa8.58□□□□□ -1.04
PTCH1-207ENST00000429896 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
PTCH1-207ENST00000429896 CELSR3Q9NYQ7 3312 aa8.57□□□□□ -1.04
PTCH1-207ENST00000429896 A0A1B0GU69 56 aa8.57□□□□□ -1.04
PTCH1-207ENST00000429896 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
PTCH1-207ENST00000429896 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-207ENST00000429896 Q6ZRP5 223 aa8.56□□□□□ -1.04
PTCH1-207ENST00000429896 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
PTCH1-207ENST00000429896 FREM2Q5SZK8 3169 aa8.56□□□□□ -1.04
PTCH1-207ENST00000429896 ATMQ13315 3056 aa8.55□□□□□ -1.04
PTCH1-207ENST00000429896 Q96NJ1 140 aa8.55□□□□□ -1.04
PTCH1-207ENST00000429896 MYO15AQ9UKN7 3530 aa8.55□□□□□ -1.04
PTCH1-207ENST00000429896 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
PTCH1-207ENST00000429896 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
PTCH1-207ENST00000429896 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
PTCH1-207ENST00000429896 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
PTCH1-207ENST00000429896 J3QL48 77 aa8.53□□□□□ -1.04
PTCH1-207ENST00000429896 LITAFQ99732 161 aa8.51□□□□□ -1.05
PTCH1-207ENST00000429896 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
PTCH1-207ENST00000429896 LINC00313P59037 77 aa8.51□□□□□ -1.05
PTCH1-207ENST00000429896 EPM2AB3EWF7 344 aa8.51□□□□□ -1.05
PTCH1-207ENST00000429896 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
PTCH1-207ENST00000429896 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
PTCH1-207ENST00000429896 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
PTCH1-207ENST00000429896 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
PTCH1-207ENST00000429896 COL12A1Q99715 3063 aa8.47□□□□□ -1.05
PTCH1-207ENST00000429896 ACYP2P14621 99 aa8.46□□□□□ -1.06
PTCH1-207ENST00000429896 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
PTCH1-207ENST00000429896 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.06
PTCH1-207ENST00000429896 TNP2Q05952 138 aa8.45□□□□□ -1.06
PTCH1-207ENST00000429896 BCE1O60756 84 aa8.45□□□□□ -1.06
PTCH1-207ENST00000429896 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
PTCH1-207ENST00000429896 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
PTCH1-207ENST00000429896 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-207ENST00000429896 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
PTCH1-207ENST00000429896 CXCL6P80162 114 aa8.44□□□□□ -1.06
PTCH1-207ENST00000429896 TEX15Q9BXT5 2789 aa8.44□□□□□ -1.06
PTCH1-207ENST00000429896 KALRNO60229 2985 aa8.43□□□□□ -1.06
PTCH1-207ENST00000429896 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
PTCH1-207ENST00000429896 LCE6AA0A183 80 aa8.42□□□□□ -1.06
PTCH1-207ENST00000429896 VPREB1P12018 145 aa8.42□□□□□ -1.06
PTCH1-207ENST00000429896 ATP11AUNQ6ZP68 121 aa8.42□□□□□ -1.06
PTCH1-207ENST00000429896 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
PTCH1-207ENST00000429896 UTP20O75691 2785 aaKnown RBP8.41□□□□□ -1.06
PTCH1-207ENST00000429896 Q6ZRX8 168 aa8.41□□□□□ -1.06
PTCH1-207ENST00000429896 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
PTCH1-207ENST00000429896 APCP25054 2843 aa8.41□□□□□ -1.06
PTCH1-207ENST00000429896 A0A0G2JQZ4 141 aa8.4□□□□□ -1.06
PTCH1-207ENST00000429896 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
PTCH1-207ENST00000429896 Q8NBF4 154 aa8.39□□□□□ -1.07
PTCH1-207ENST00000429896 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
PTCH1-207ENST00000429896 SPEGQ15772 3267 aa8.39□□□□□ -1.07
PTCH1-207ENST00000429896 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
PTCH1-207ENST00000429896 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
PTCH1-207ENST00000429896 DSCR10P59022 87 aa8.38□□□□□ -1.07
PTCH1-207ENST00000429896 NBEAQ8NFP9 2946 aa8.38□□□□□ -1.07
PTCH1-207ENST00000429896 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
PTCH1-207ENST00000429896 ANAPC11Q9NYG5 84 aa8.37□□□□□ -1.07
PTCH1-207ENST00000429896 Q6ZQT0 140 aa8.36□□□□□ -1.07
PTCH1-207ENST00000429896 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
PTCH1-207ENST00000429896 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
PTCH1-207ENST00000429896 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
PTCH1-207ENST00000429896 IGLV6-57P01721 117 aa8.35□□□□□ -1.07
PTCH1-207ENST00000429896 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
PTCH1-207ENST00000429896 ITPR2Q14571 2701 aa8.34□□□□□ -1.07
PTCH1-207ENST00000429896 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
PTCH1-207ENST00000429896 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
PTCH1-207ENST00000429896 KCNQ1DNQ9H478 68 aa8.32□□□□□ -1.08
PTCH1-207ENST00000429896 ADGRG4Q8IZF6 3080 aa8.32□□□□□ -1.08
PTCH1-207ENST00000429896 K7EQZ3 153 aa8.32□□□□□ -1.08
PTCH1-207ENST00000429896 DMDP11532 3685 aa8.32□□□□□ -1.08
PTCH1-207ENST00000429896 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
PTCH1-207ENST00000429896 TRAV22A0A0B4J277 110 aa8.31□□□□□ -1.08
PTCH1-207ENST00000429896 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-207ENST00000429896 LRBAP50851 2863 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms