RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 TEP1Q99973 2627 aaKnown RBP7.58□□□□□ -1.2
LINC01238-203ENST00000429456 J3QL48 77 aa7.56□□□□□ -1.2
LINC01238-203ENST00000429456 LINC01556Q5JQF7 62 aa7.56□□□□□ -1.2
LINC01238-203ENST00000429456 Q6ZRP5 223 aa7.56□□□□□ -1.2
LINC01238-203ENST00000429456 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
LINC01238-203ENST00000429456 IGKV2D-24A0A075B6R9 120 aa7.54□□□□□ -1.2
LINC01238-203ENST00000429456 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
LINC01238-203ENST00000429456 SYCNQ0VAF6 134 aa7.53□□□□□ -1.2
LINC01238-203ENST00000429456 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
LINC01238-203ENST00000429456 DEFB131BA0A096LNP1 70 aa7.52□□□□□ -1.21
LINC01238-203ENST00000429456 KCNQ1DNQ9H478 68 aa7.52□□□□□ -1.21
LINC01238-203ENST00000429456 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
LINC01238-203ENST00000429456 FLNBO75369 2602 aaKnown RBP7.51□□□□□ -1.21
LINC01238-203ENST00000429456 SERTAD4-AS1Q5TG53 156 aa7.5□□□□□ -1.21
LINC01238-203ENST00000429456 C7orf33Q8WU49 177 aa7.5□□□□□ -1.21
LINC01238-203ENST00000429456 DNAH10OSP0CZ25 163 aa7.49□□□□□ -1.21
LINC01238-203ENST00000429456 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
LINC01238-203ENST00000429456 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
LINC01238-203ENST00000429456 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
LINC01238-203ENST00000429456 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
LINC01238-203ENST00000429456 CMYA5Q8N3K9 4069 aa7.48□□□□□ -1.21
LINC01238-203ENST00000429456 PLA2G2DQ9UNK4 145 aa7.47□□□□□ -1.21
LINC01238-203ENST00000429456 ANK2Q01484 3957 aa7.47□□□□□ -1.21
LINC01238-203ENST00000429456 H7BZZ5 65 aa7.47□□□□□ -1.21
LINC01238-203ENST00000429456 Q8N377 158 aa7.47□□□□□ -1.21
LINC01238-203ENST00000429456 A0A0U1RQV1 116 aa7.46□□□□□ -1.21
LINC01238-203ENST00000429456 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
LINC01238-203ENST00000429456 PKD1L1Q8TDX9 2849 aa7.45□□□□□ -1.22
LINC01238-203ENST00000429456 IGLV5-37A0A075B6J1 123 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 DEFB105AQ8NG35 78 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 TM2D3Q9BRN9 247 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 KRTAP4-16G5E9R7 235 aaPredicted RBP7.44□□□□□ -1.22
LINC01238-203ENST00000429456 NREPQ16612 68 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 DHRS4-AS1Q9P1J3 65 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 TENM3Q9P273 2699 aa7.44□□□□□ -1.22
LINC01238-203ENST00000429456 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 Q6ZRX8 168 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 RMI2Q96E14 147 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 IGLV1-50A0A075B6I6 118 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 PRYO14603 147 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 SPRR1AP35321 89 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
LINC01238-203ENST00000429456 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 RPL37AP8A6NKH3 93 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 BPY2O14599 106 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 KRTAP24-1Q3LI83 254 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 CASC10Q5T4H9 136 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 Q9BRP9 147 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 Q8N9L7 120 aa7.42□□□□□ -1.22
LINC01238-203ENST00000429456 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
LINC01238-203ENST00000429456 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
LINC01238-203ENST00000429456 TNP2Q05952 138 aa7.4□□□□□ -1.23
LINC01238-203ENST00000429456 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 A0A1B0GW54 56 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 F8WEM9 126 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 NDUFC1O43677 76 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 CD164Q04900 197 aa7.39□□□□□ -1.23
LINC01238-203ENST00000429456 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC01238-203ENST00000429456 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
LINC01238-203ENST00000429456 F8P00451 2351 aa7.38□□□□□ -1.23
LINC01238-203ENST00000429456 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
LINC01238-203ENST00000429456 BAHCC1Q9P281 2608 aa7.37□□□□□ -1.23
LINC01238-203ENST00000429456 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
LINC01238-203ENST00000429456 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
LINC01238-203ENST00000429456 MRPL55Q7Z7F7 128 aaKnown RBP7.36□□□□□ -1.23
LINC01238-203ENST00000429456 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
LINC01238-203ENST00000429456 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
LINC01238-203ENST00000429456 Q8NBF4 154 aa7.35□□□□□ -1.23
LINC01238-203ENST00000429456 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
LINC01238-203ENST00000429456 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
LINC01238-203ENST00000429456 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
LINC01238-203ENST00000429456 UBE2BP63146 152 aa7.32□□□□□ -1.24
LINC01238-203ENST00000429456 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
LINC01238-203ENST00000429456 FP248Q71RG6 208 aaPredicted RBP7.31□□□□□ -1.24
LINC01238-203ENST00000429456 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
LINC01238-203ENST00000429456 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
LINC01238-203ENST00000429456 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
LINC01238-203ENST00000429456 DSCR10P59022 87 aa7.29□□□□□ -1.24
LINC01238-203ENST00000429456 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
LINC01238-203ENST00000429456 K7EIL1 84 aa7.27□□□□□ -1.24
LINC01238-203ENST00000429456 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.24
LINC01238-203ENST00000429456 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
LINC01238-203ENST00000429456 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
LINC01238-203ENST00000429456 A0A096LNI7 61 aa7.26□□□□□ -1.25
LINC01238-203ENST00000429456 LCE6AA0A183 80 aa7.26□□□□□ -1.25
LINC01238-203ENST00000429456 HIGD2AQ9BW72 106 aa7.26□□□□□ -1.25
LINC01238-203ENST00000429456 C16orf90A8MZG2 172 aa7.26□□□□□ -1.25
LINC01238-203ENST00000429456 MAST4O15021 2626 aa7.25□□□□□ -1.25
LINC01238-203ENST00000429456 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
LINC01238-203ENST00000429456 K7EQZ3 153 aa7.25□□□□□ -1.25
LINC01238-203ENST00000429456 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
LINC01238-203ENST00000429456 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
LINC01238-203ENST00000429456 KRTAP1-5Q9BYS1 174 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms