RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 PRB2P02812 416 aaPredicted RBP9.45□□□□□ -0.9
ERCC3-202ENST00000426778 RMI2Q96E14 147 aa9.45□□□□□ -0.9
ERCC3-202ENST00000426778 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
ERCC3-202ENST00000426778 M0R378 163 aa9.44□□□□□ -0.9
ERCC3-202ENST00000426778 EGFEM1PQ0D2K5 195 aa9.44□□□□□ -0.9
ERCC3-202ENST00000426778 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
ERCC3-202ENST00000426778 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
ERCC3-202ENST00000426778 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
ERCC3-202ENST00000426778 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
ERCC3-202ENST00000426778 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
ERCC3-202ENST00000426778 MGAM2Q2M2H8 2515 aa9.42□□□□□ -0.9
ERCC3-202ENST00000426778 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
ERCC3-202ENST00000426778 BPY2O14599 106 aa9.41□□□□□ -0.9
ERCC3-202ENST00000426778 SYCNQ0VAF6 134 aa9.4□□□□□ -0.9
ERCC3-202ENST00000426778 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
ERCC3-202ENST00000426778 NKAPP1Q8N9T2 125 aa9.39□□□□□ -0.91
ERCC3-202ENST00000426778 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
ERCC3-202ENST00000426778 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
ERCC3-202ENST00000426778 TRAV7A0A075B6U4 112 aa9.38□□□□□ -0.91
ERCC3-202ENST00000426778 H7BZZ5 65 aa9.37□□□□□ -0.91
ERCC3-202ENST00000426778 PDE6GP18545 87 aa9.37□□□□□ -0.91
ERCC3-202ENST00000426778 C11orf45Q8TAV5 145 aa9.36□□□□□ -0.91
ERCC3-202ENST00000426778 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
ERCC3-202ENST00000426778 CXCL6P80162 114 aa9.36□□□□□ -0.91
ERCC3-202ENST00000426778 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
ERCC3-202ENST00000426778 FAM236DA0A1B0GTK5 79 aa9.35□□□□□ -0.91
ERCC3-202ENST00000426778 F8WEM9 126 aa9.35□□□□□ -0.91
ERCC3-202ENST00000426778 FAM236CP0DP71 79 aa9.35□□□□□ -0.91
ERCC3-202ENST00000426778 Q8N377 158 aa9.35□□□□□ -0.91
ERCC3-202ENST00000426778 A0A0G2JQZ4 141 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 HRCT1Q6UXD1 115 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 NREPQ16612 68 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
ERCC3-202ENST00000426778 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
ERCC3-202ENST00000426778 WIPF1O43516 503 aa9.32□□□□□ -0.92
ERCC3-202ENST00000426778 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
ERCC3-202ENST00000426778 Q9BRP9 147 aa9.31□□□□□ -0.92
ERCC3-202ENST00000426778 Q5XG85 94 aa9.31□□□□□ -0.92
ERCC3-202ENST00000426778 H3BNG1 76 aa9.3□□□□□ -0.92
ERCC3-202ENST00000426778 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
ERCC3-202ENST00000426778 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
ERCC3-202ENST00000426778 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
ERCC3-202ENST00000426778 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
ERCC3-202ENST00000426778 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
ERCC3-202ENST00000426778 H3BQ85 93 aa9.28□□□□□ -0.92
ERCC3-202ENST00000426778 KRTAP24-1Q3LI83 254 aa9.28□□□□□ -0.92
ERCC3-202ENST00000426778 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
ERCC3-202ENST00000426778 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
ERCC3-202ENST00000426778 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
ERCC3-202ENST00000426778 DNAH3Q8TD57 4116 aa9.26□□□□□ -0.93
ERCC3-202ENST00000426778 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
ERCC3-202ENST00000426778 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
ERCC3-202ENST00000426778 A0A1W2PNM2 257 aa9.25□□□□□ -0.93
ERCC3-202ENST00000426778 Q6ZRX8 168 aa9.25□□□□□ -0.93
ERCC3-202ENST00000426778 UBE2BP63146 152 aa9.25□□□□□ -0.93
ERCC3-202ENST00000426778 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
ERCC3-202ENST00000426778 FAM30AQ9NZY2 134 aa9.24□□□□□ -0.93
ERCC3-202ENST00000426778 DNAH10OSP0CZ25 163 aa9.24□□□□□ -0.93
ERCC3-202ENST00000426778 DEFB116Q30KQ4 102 aa9.24□□□□□ -0.93
ERCC3-202ENST00000426778 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
ERCC3-202ENST00000426778 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
ERCC3-202ENST00000426778 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
ERCC3-202ENST00000426778 IGLV1-50A0A075B6I6 118 aa9.23□□□□□ -0.93
ERCC3-202ENST00000426778 SMIM29Q86T20 159 aa9.22□□□□□ -0.93
ERCC3-202ENST00000426778 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
ERCC3-202ENST00000426778 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
ERCC3-202ENST00000426778 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.93
ERCC3-202ENST00000426778 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-202ENST00000426778 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.94
ERCC3-202ENST00000426778 IGLV5-48A0A075B6I7 105 aa9.2□□□□□ -0.94
ERCC3-202ENST00000426778 BCE1O60756 84 aa9.2□□□□□ -0.94
ERCC3-202ENST00000426778 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
ERCC3-202ENST00000426778 PRLHP81277 87 aa9.19□□□□□ -0.94
ERCC3-202ENST00000426778 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
ERCC3-202ENST00000426778 SERP1Q9Y6X1 66 aa9.19□□□□□ -0.94
ERCC3-202ENST00000426778 DHRS4-AS1Q9P1J3 65 aa9.18□□□□□ -0.94
ERCC3-202ENST00000426778 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.16□□□□□ -0.94
ERCC3-202ENST00000426778 K7EQZ3 153 aa9.16□□□□□ -0.94
ERCC3-202ENST00000426778 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
ERCC3-202ENST00000426778 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
ERCC3-202ENST00000426778 FAM229BQ4G0N7 80 aa9.15□□□□□ -0.94
ERCC3-202ENST00000426778 PRYO14603 147 aa9.15□□□□□ -0.95
ERCC3-202ENST00000426778 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.95
ERCC3-202ENST00000426778 TNP2Q05952 138 aa9.15□□□□□ -0.95
ERCC3-202ENST00000426778 Q8NBF4 154 aa9.14□□□□□ -0.95
ERCC3-202ENST00000426778 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
ERCC3-202ENST00000426778 SPRR1AP35321 89 aa9.14□□□□□ -0.95
ERCC3-202ENST00000426778 A0A096LNI7 61 aa9.13□□□□□ -0.95
ERCC3-202ENST00000426778 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
ERCC3-202ENST00000426778 DSCR10P59022 87 aa9.12□□□□□ -0.95
ERCC3-202ENST00000426778 REG3GQ6UW15 175 aa9.12□□□□□ -0.95
ERCC3-202ENST00000426778 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
ERCC3-202ENST00000426778 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
ERCC3-202ENST00000426778 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
ERCC3-202ENST00000426778 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
ERCC3-202ENST00000426778 PRR4Q16378 134 aa9.11□□□□□ -0.95
ERCC3-202ENST00000426778 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
ERCC3-202ENST00000426778 F8WDY8 70 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms