RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST1H2BCP62807 126 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HERV-K104P63124 156 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST2H2BEQ16778 126 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST1H2BHQ93079 126 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST1H2BNQ99877 126 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 HIST1H2BMQ99879 126 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 NDUFA12Q9UI09 145 aa5.65□□□□□ -1.5
GACAT3-201ENST00000426539 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
GACAT3-201ENST00000426539 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
GACAT3-201ENST00000426539 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
GACAT3-201ENST00000426539 SPINK1P00995 79 aa5.63□□□□□ -1.51
GACAT3-201ENST00000426539 AKR1D1P51857 326 aa5.63□□□□□ -1.51
GACAT3-201ENST00000426539 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
GACAT3-201ENST00000426539 LOC107984156A0A0G2JMH3 177 aa5.62□□□□□ -1.51
GACAT3-201ENST00000426539 MYMXA0A1B0GTQ4 84 aa5.62□□□□□ -1.51
GACAT3-201ENST00000426539 ARL17AQ8IVW1 177 aa5.62□□□□□ -1.51
GACAT3-201ENST00000426539 Q9BRP9 147 aa5.62□□□□□ -1.51
GACAT3-201ENST00000426539 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
GACAT3-201ENST00000426539 MOBPQ13875 183 aa5.61□□□□□ -1.51
GACAT3-201ENST00000426539 Q8N377 158 aa5.61□□□□□ -1.51
GACAT3-201ENST00000426539 IGLV9-49A0A0B4J1Y8 123 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 H0Y8G0 127 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 LEPROTO15243 131 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 HSBP1O75506 76 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 S100A2P29034 98 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 DDTP30046 118 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
GACAT3-201ENST00000426539 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 MAP1LC3CQ9BXW4 147 aa5.6□□□□□ -1.51
GACAT3-201ENST00000426539 TRBV10-2A0A0K0K1G8 114 aa5.59□□□□□ -1.51
GACAT3-201ENST00000426539 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
GACAT3-201ENST00000426539 Q6ZRX8 168 aa5.59□□□□□ -1.51
GACAT3-201ENST00000426539 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
GACAT3-201ENST00000426539 LINC00518Q8N0U6 118 aa5.59□□□□□ -1.51
GACAT3-201ENST00000426539 IGLV6-57P01721 117 aa5.58□□□□□ -1.52
GACAT3-201ENST00000426539 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
GACAT3-201ENST00000426539 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
GACAT3-201ENST00000426539 J3QQQ9 107 aa5.57□□□□□ -1.52
GACAT3-201ENST00000426539 SERF1AO75920 110 aa5.57□□□□□ -1.52
GACAT3-201ENST00000426539 SMIM6P0DI80 62 aa5.57□□□□□ -1.52
GACAT3-201ENST00000426539 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
GACAT3-201ENST00000426539 SOSTDC1Q6X4U4 206 aa5.57□□□□□ -1.52
GACAT3-201ENST00000426539 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
GACAT3-201ENST00000426539 SPANXB1Q9NS25 103 aaPredicted RBP5.57□□□□□ -1.52
GACAT3-201ENST00000426539 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 NDUFC2O95298 119 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 FABP4P15090 132 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 PLNP26678 52 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 S100A12P80511 92 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 C12orf57Q99622 126 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 HIST1H2BLQ99880 126 aa5.56□□□□□ -1.52
GACAT3-201ENST00000426539 SLC25A20O43772 301 aa5.55□□□□□ -1.52
GACAT3-201ENST00000426539 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
GACAT3-201ENST00000426539 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
GACAT3-201ENST00000426539 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
GACAT3-201ENST00000426539 TRAV23DV6A0A075B6W5 121 aa5.54□□□□□ -1.52
GACAT3-201ENST00000426539 DPM2O94777 84 aa5.54□□□□□ -1.52
GACAT3-201ENST00000426539 LGALS3P17931 250 aaKnown RBP5.54□□□□□ -1.52
GACAT3-201ENST00000426539 NMUP48645 174 aa5.54□□□□□ -1.52
GACAT3-201ENST00000426539 S100A7L2Q5SY68 101 aa5.54□□□□□ -1.52
GACAT3-201ENST00000426539 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 ZNF73O43830 326 aaPredicted RBP5.53□□□□□ -1.52
GACAT3-201ENST00000426539 IGKCP01834 107 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 NPC2P61916 151 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 MIEN1Q9BRT3 115 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
GACAT3-201ENST00000426539 HERVK_113P61574 105 aa5.52□□□□□ -1.53
GACAT3-201ENST00000426539 JOSD1Q15040 202 aaPredicted RBP5.52□□□□□ -1.53
GACAT3-201ENST00000426539 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
GACAT3-201ENST00000426539 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
GACAT3-201ENST00000426539 HSPB8Q9UJY1 196 aa5.52□□□□□ -1.53
GACAT3-201ENST00000426539 PYY3Q5JQD4 70 aa5.51□□□□□ -1.53
GACAT3-201ENST00000426539 E9PLD3 99 aa5.5□□□□□ -1.53
GACAT3-201ENST00000426539 SPRR1BP22528 89 aa5.5□□□□□ -1.53
GACAT3-201ENST00000426539 LITAFQ99732 161 aa5.5□□□□□ -1.53
GACAT3-201ENST00000426539 PCP4L1A6NKN8 68 aa5.48□□□□□ -1.53
GACAT3-201ENST00000426539 LINC00308Q8TCZ7 52 aa5.48□□□□□ -1.53
GACAT3-201ENST00000426539 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
GACAT3-201ENST00000426539 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
GACAT3-201ENST00000426539 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
GACAT3-201ENST00000426539 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
GACAT3-201ENST00000426539 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 TIMM17BO60830 172 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
GACAT3-201ENST00000426539 KRTDAPP60985 99 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 MT1HP80294 61 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 OR13C6PQ8NH95 151 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 DHRS4-AS1Q9P1J3 65 aa5.45□□□□□ -1.54
GACAT3-201ENST00000426539 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
GACAT3-201ENST00000426539 C3orf79P0CE67 100 aa5.44□□□□□ -1.54
GACAT3-201ENST00000426539 ELOF1P60002 83 aaKnown RBP5.44□□□□□ -1.54
GACAT3-201ENST00000426539 LIMD2Q9BT23 127 aa5.44□□□□□ -1.54
GACAT3-201ENST00000426539 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
GACAT3-201ENST00000426539 CBY1Q9Y3M2 126 aa5.44□□□□□ -1.54
GACAT3-201ENST00000426539 IGLV8-61A0A075B6I0 122 aa5.43□□□□□ -1.54
GACAT3-201ENST00000426539 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms