RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 HIST1H2BBP33778 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST1H2BDP58876 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST1H2BCP62807 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST2H2BEQ16778 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 FP248Q71RG6 208 aaPredicted RBP14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST1H2BHQ93079 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST1H2BNQ99877 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 HIST1H2BMQ99879 126 aa14.13□□□□□ -0.15
PTPMT1-203ENST00000426530 SPINK1P00995 79 aa14.11□□□□□ -0.15
PTPMT1-203ENST00000426530 ZNF73O43830 326 aaPredicted RBP14.09□□□□□ -0.15
PTPMT1-203ENST00000426530 LITAFQ99732 161 aa14.08□□□□□ -0.16
PTPMT1-203ENST00000426530 KRTAP13-3Q3SY46 172 aa14.07□□□□□ -0.16
PTPMT1-203ENST00000426530 ST20-AS1Q8NBB2 130 aa14.07□□□□□ -0.16
PTPMT1-203ENST00000426530 JOSD1Q15040 202 aaPredicted RBP14.06□□□□□ -0.16
PTPMT1-203ENST00000426530 TTTY13Q9BZ97 58 aa14.06□□□□□ -0.16
PTPMT1-203ENST00000426530 LINC01545Q5VT33 79 aa14.05□□□□□ -0.16
PTPMT1-203ENST00000426530 SSBP3-AS1Q7Z2R9 100 aa14.05□□□□□ -0.16
PTPMT1-203ENST00000426530 LINC00308Q8TCZ7 52 aa14.05□□□□□ -0.16
PTPMT1-203ENST00000426530 C9orf153Q5TBE3 101 aa14.04□□□□□ -0.16
PTPMT1-203ENST00000426530 Q8N377 158 aa14.03□□□□□ -0.16
PTPMT1-203ENST00000426530 OR13C6PQ8NH95 151 aa14.03□□□□□ -0.16
PTPMT1-203ENST00000426530 LCE2AQ5TA79 106 aaPredicted RBP14.02□□□□□ -0.17
PTPMT1-203ENST00000426530 SPANXCQ9NY87 97 aa14.02□□□□□ -0.17
PTPMT1-203ENST00000426530 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
PTPMT1-203ENST00000426530 PET117Q6UWS5 81 aa14.01□□□□□ -0.17
PTPMT1-203ENST00000426530 TIMM17BO60830 172 aa13.99□□□□□ -0.17
PTPMT1-203ENST00000426530 C3orf79P0CE67 100 aa13.99□□□□□ -0.17
PTPMT1-203ENST00000426530 HINT1P49773 126 aaPredicted RBP13.97□□□□□ -0.17
PTPMT1-203ENST00000426530 RPS29P62273 56 aaKnown RBP13.97□□□□□ -0.17
PTPMT1-203ENST00000426530 KRTDAPP60985 99 aa13.95□□□□□ -0.18
PTPMT1-203ENST00000426530 SLC25A20O43772 301 aa13.94□□□□□ -0.18
PTPMT1-203ENST00000426530 CBY1Q9Y3M2 126 aa13.94□□□□□ -0.18
PTPMT1-203ENST00000426530 SPANXDQ9BXN6 97 aa13.93□□□□□ -0.18
PTPMT1-203ENST00000426530 ASB16-AS1Q495Z4 193 aa13.9□□□□□ -0.18
PTPMT1-203ENST00000426530 C5orf52A6NGY3 159 aa13.88□□□□□ -0.19
PTPMT1-203ENST00000426530 C6orf99Q4VX62 202 aa13.88□□□□□ -0.19
PTPMT1-203ENST00000426530 ANKRD39Q53RE8 183 aa13.88□□□□□ -0.19
PTPMT1-203ENST00000426530 KRTAP4-1Q9BYQ7 146 aa13.88□□□□□ -0.19
PTPMT1-203ENST00000426530 DHRS4-AS1Q9P1J3 65 aa13.88□□□□□ -0.19
PTPMT1-203ENST00000426530 SPRR1BP22528 89 aa13.87□□□□□ -0.19
PTPMT1-203ENST00000426530 COX7BP24311 80 aa13.87□□□□□ -0.19
PTPMT1-203ENST00000426530 COA6Q5JTJ3 125 aaKnown RBP13.87□□□□□ -0.19
PTPMT1-203ENST00000426530 HRCT1Q6UXD1 115 aa13.87□□□□□ -0.19
PTPMT1-203ENST00000426530 ATOH7Q8N100 152 aa13.87□□□□□ -0.19
PTPMT1-203ENST00000426530 ELOF1P60002 83 aaKnown RBP13.86□□□□□ -0.19
PTPMT1-203ENST00000426530 SCGB1D4Q6XE38 83 aa13.86□□□□□ -0.19
PTPMT1-203ENST00000426530 KRTAP9-2Q9BYQ4 174 aa13.85□□□□□ -0.19
PTPMT1-203ENST00000426530 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
PTPMT1-203ENST00000426530 SEC61BP60468 96 aaKnown RBP13.82□□□□□ -0.2
PTPMT1-203ENST00000426530 DEFB105AQ8NG35 78 aa13.82□□□□□ -0.2
PTPMT1-203ENST00000426530 C20orf202A1L168 122 aa13.81□□□□□ -0.2
PTPMT1-203ENST00000426530 SLC25A34Q6PIV7 304 aa13.81□□□□□ -0.2
PTPMT1-203ENST00000426530 Q1RN00 199 aa13.8□□□□□ -0.2
PTPMT1-203ENST00000426530 LAMTOR3Q9UHA4 124 aa13.8□□□□□ -0.2
PTPMT1-203ENST00000426530 XP32Q5T750 250 aa13.79□□□□□ -0.2
PTPMT1-203ENST00000426530 PCP2Q8IVA1 136 aa13.79□□□□□ -0.2
PTPMT1-203ENST00000426530 TAL2Q16559 108 aa13.78□□□□□ -0.2
PTPMT1-203ENST00000426530 MUSTN1Q8IVN3 82 aa13.76□□□□□ -0.21
PTPMT1-203ENST00000426530 A6NDN8 102 aa13.75□□□□□ -0.21
PTPMT1-203ENST00000426530 LIMD2Q9BT23 127 aa13.75□□□□□ -0.21
PTPMT1-203ENST00000426530 IFITM1P13164 125 aa13.74□□□□□ -0.21
PTPMT1-203ENST00000426530 COPS9Q8WXC6 57 aa13.72□□□□□ -0.21
PTPMT1-203ENST00000426530 TRBV7-6A0A0J9YX20 115 aa13.71□□□□□ -0.21
PTPMT1-203ENST00000426530 TEX49A0A1B0GTD5 131 aa13.71□□□□□ -0.21
PTPMT1-203ENST00000426530 A0A1B0GWB2 263 aa13.7□□□□□ -0.22
PTPMT1-203ENST00000426530 H7C2G1 150 aa13.7□□□□□ -0.22
PTPMT1-203ENST00000426530 LINC01547P58512 204 aaPredicted RBP13.69□□□□□ -0.22
PTPMT1-203ENST00000426530 SMIM29Q86T20 159 aa13.69□□□□□ -0.22
PTPMT1-203ENST00000426530 A0A0G2JQZ4 141 aa13.68□□□□□ -0.22
PTPMT1-203ENST00000426530 C9orf92A6NGG3 77 aa13.68□□□□□ -0.22
PTPMT1-203ENST00000426530 Q6ZVH6 145 aa13.68□□□□□ -0.22
PTPMT1-203ENST00000426530 PRO1933Q9H354 126 aa13.68□□□□□ -0.22
PTPMT1-203ENST00000426530 IGLV5-48A0A075B6I7 105 aa13.64□□□□□ -0.23
PTPMT1-203ENST00000426530 SMIM11BQ8TCY0 68 aa13.64□□□□□ -0.23
PTPMT1-203ENST00000426530 CD164Q04900 197 aa13.63□□□□□ -0.23
PTPMT1-203ENST00000426530 TRAV13-2A0A0B4J235 113 aa13.61□□□□□ -0.23
PTPMT1-203ENST00000426530 AKR1D1P51857 326 aa13.61□□□□□ -0.23
PTPMT1-203ENST00000426530 HIST3H2BBQ8N257 126 aa13.6□□□□□ -0.23
PTPMT1-203ENST00000426530 HIST1H2BLQ99880 126 aa13.59□□□□□ -0.23
PTPMT1-203ENST00000426530 PCOTHQ58A44 107 aa13.58□□□□□ -0.24
PTPMT1-203ENST00000426530 A4D1N5 150 aa13.57□□□□□ -0.24
PTPMT1-203ENST00000426530 SNRPEP62304 92 aaKnown RBP13.57□□□□□ -0.24
PTPMT1-203ENST00000426530 S100A2P29034 98 aa13.55□□□□□ -0.24
PTPMT1-203ENST00000426530 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
PTPMT1-203ENST00000426530 C1orf195Q5TG92 126 aa13.54□□□□□ -0.24
PTPMT1-203ENST00000426530 IGLV8-61A0A075B6I0 122 aa13.52□□□□□ -0.25
PTPMT1-203ENST00000426530 Q5XG85 94 aa13.52□□□□□ -0.25
PTPMT1-203ENST00000426530 HSBP1L1C9JCN9 74 aa13.5□□□□□ -0.25
PTPMT1-203ENST00000426530 LCE2CQ5TA81 110 aa13.5□□□□□ -0.25
PTPMT1-203ENST00000426530 LINC00575Q6W349 94 aa13.48□□□□□ -0.25
PTPMT1-203ENST00000426530 KRTAP19-2Q3LHN2 52 aa13.47□□□□□ -0.25
PTPMT1-203ENST00000426530 VAMP3Q15836 100 aa13.46□□□□□ -0.25
PTPMT1-203ENST00000426530 Q6ZQY7 126 aa13.46□□□□□ -0.25
PTPMT1-203ENST00000426530 C12orf57Q99622 126 aa13.46□□□□□ -0.25
PTPMT1-203ENST00000426530 F8WEM9 126 aa13.45□□□□□ -0.26
PTPMT1-203ENST00000426530 KRTAP9-6A0A140TA67 174 aa13.42□□□□□ -0.26
PTPMT1-203ENST00000426530 hADV29S1A0JD25 119 aa13.42□□□□□ -0.26
PTPMT1-203ENST00000426530 S100A6P06703 90 aa13.42□□□□□ -0.26
PTPMT1-203ENST00000426530 TCL1BO95988 128 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms