RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CAMK2N2Q96S95 79 aa8.69□□□□□ -1.02
COL12A1-205ENST00000425443 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
COL12A1-205ENST00000425443 HAMPP81172 84 aa8.69□□□□□ -1.02
COL12A1-205ENST00000425443 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
COL12A1-205ENST00000425443 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
COL12A1-205ENST00000425443 A0A0J9YWU9 116 aa8.68□□□□□ -1.02
COL12A1-205ENST00000425443 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
COL12A1-205ENST00000425443 Q6ZQY7 126 aa8.68□□□□□ -1.02
COL12A1-205ENST00000425443 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
COL12A1-205ENST00000425443 TRBV10-3A0A0K0K1G6 114 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 LINC00575Q6W349 94 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 ANK2Q01484 3957 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 ESRGQ1W209 222 aa8.67□□□□□ -1.02
COL12A1-205ENST00000425443 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
COL12A1-205ENST00000425443 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
COL12A1-205ENST00000425443 MUC7Q8TAX7 377 aa8.66□□□□□ -1.02
COL12A1-205ENST00000425443 JMJD7-PLA2G4BH0Y9G9 81 aa8.65□□□□□ -1.02
COL12A1-205ENST00000425443 H3BNG1 76 aa8.65□□□□□ -1.02
COL12A1-205ENST00000425443 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.03
COL12A1-205ENST00000425443 M0R378 163 aa8.65□□□□□ -1.03
COL12A1-205ENST00000425443 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
COL12A1-205ENST00000425443 Q6ZQT0 140 aa8.63□□□□□ -1.03
COL12A1-205ENST00000425443 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
COL12A1-205ENST00000425443 PRB2P02812 416 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-205ENST00000425443 MDFIQ99750 246 aa8.63□□□□□ -1.03
COL12A1-205ENST00000425443 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-205ENST00000425443 EGFEM1PQ0D2K5 195 aa8.62□□□□□ -1.03
COL12A1-205ENST00000425443 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
COL12A1-205ENST00000425443 DIRC1Q969H9 104 aa8.6□□□□□ -1.03
COL12A1-205ENST00000425443 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
COL12A1-205ENST00000425443 ZNF73O43830 326 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-205ENST00000425443 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL12A1-205ENST00000425443 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
COL12A1-205ENST00000425443 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-205ENST00000425443 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
COL12A1-205ENST00000425443 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 Q8N9L7 120 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 LOC110117498A0A087WWA1 95 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 Q6ZRP5 223 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 DEFB105AQ8NG35 78 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 COX7BP24311 80 aa8.56□□□□□ -1.04
COL12A1-205ENST00000425443 NDUFC1O43677 76 aa8.55□□□□□ -1.04
COL12A1-205ENST00000425443 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-205ENST00000425443 Q6ZVQ6 151 aa8.55□□□□□ -1.04
COL12A1-205ENST00000425443 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
COL12A1-205ENST00000425443 ATP5EP2Q5VTU8 51 aa8.54□□□□□ -1.04
COL12A1-205ENST00000425443 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
COL12A1-205ENST00000425443 VPREB1P12018 145 aa8.53□□□□□ -1.04
COL12A1-205ENST00000425443 A8MUN3 132 aa8.53□□□□□ -1.04
COL12A1-205ENST00000425443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-205ENST00000425443 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.05
COL12A1-205ENST00000425443 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
COL12A1-205ENST00000425443 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
COL12A1-205ENST00000425443 TRAV22A0A0B4J277 110 aa8.51□□□□□ -1.05
COL12A1-205ENST00000425443 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
COL12A1-205ENST00000425443 ELOF1P60002 83 aaKnown RBP8.5□□□□□ -1.05
COL12A1-205ENST00000425443 UBE2BP63146 152 aa8.49□□□□□ -1.05
COL12A1-205ENST00000425443 STAB2Q8WWQ8 2551 aa8.49□□□□□ -1.05
COL12A1-205ENST00000425443 H3BQ85 93 aa8.49□□□□□ -1.05
COL12A1-205ENST00000425443 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
COL12A1-205ENST00000425443 TRBV7-4A0A0J9YYF1 115 aa8.49□□□□□ -1.05
COL12A1-205ENST00000425443 CMYA5Q8N3K9 4069 aa8.48□□□□□ -1.05
COL12A1-205ENST00000425443 C3orf84H3BNL1 204 aa8.47□□□□□ -1.05
COL12A1-205ENST00000425443 CASC10Q5T4H9 136 aa8.47□□□□□ -1.05
COL12A1-205ENST00000425443 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
COL12A1-205ENST00000425443 FAM168BA1KXE4 195 aa8.46□□□□□ -1.05
COL12A1-205ENST00000425443 TENM2Q9NT68 2774 aa8.46□□□□□ -1.05
COL12A1-205ENST00000425443 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 NDUFS5O43920 106 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 PRR4Q16378 134 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 NREPQ16612 68 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 PDE6GP18545 87 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 Q1T7F1 81 aa8.45□□□□□ -1.06
COL12A1-205ENST00000425443 PRYO14603 147 aa8.44□□□□□ -1.06
COL12A1-205ENST00000425443 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
COL12A1-205ENST00000425443 K7EIL1 84 aa8.43□□□□□ -1.06
COL12A1-205ENST00000425443 DNAH1Q9P2D7 4330 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 CXCL6P80162 114 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
COL12A1-205ENST00000425443 BPY2O14599 106 aa8.41□□□□□ -1.06
COL12A1-205ENST00000425443 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
COL12A1-205ENST00000425443 LCA10Q71F78 164 aa8.39□□□□□ -1.07
COL12A1-205ENST00000425443 LYSTQ99698 3801 aa8.39□□□□□ -1.07
COL12A1-205ENST00000425443 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
COL12A1-205ENST00000425443 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
COL12A1-205ENST00000425443 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
COL12A1-205ENST00000425443 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
COL12A1-205ENST00000425443 BCE1O60756 84 aa8.38□□□□□ -1.07
COL12A1-205ENST00000425443 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
COL12A1-205ENST00000425443 PSCAO43653 123 aa8.37□□□□□ -1.07
COL12A1-205ENST00000425443 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
COL12A1-205ENST00000425443 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
COL12A1-205ENST00000425443 UBE2AP49459 152 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms