RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 LINC00310P59036 64 aa8.13□□□□□ -1.11
ATG4B-209ENST00000425239 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
ATG4B-209ENST00000425239 J3QQQ9 107 aa8.12□□□□□ -1.11
ATG4B-209ENST00000425239 SPRR1BP22528 89 aa8.12□□□□□ -1.11
ATG4B-209ENST00000425239 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
ATG4B-209ENST00000425239 ADAMTSL4-AS1Q5T5F5 129 aa8.12□□□□□ -1.11
ATG4B-209ENST00000425239 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 ZNF73O43830 326 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 JOSD1Q15040 202 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-209ENST00000425239 C9orf153Q5TBE3 101 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
ATG4B-209ENST00000425239 HSBP1O75506 76 aa8.09□□□□□ -1.11
ATG4B-209ENST00000425239 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
ATG4B-209ENST00000425239 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
ATG4B-209ENST00000425239 H0Y8G0 127 aa8.08□□□□□ -1.12
ATG4B-209ENST00000425239 NMUP48645 174 aa8.08□□□□□ -1.12
ATG4B-209ENST00000425239 KRTAP10-6P60371 365 aaPredicted RBP8.08□□□□□ -1.12
ATG4B-209ENST00000425239 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
ATG4B-209ENST00000425239 PLNP26678 52 aa8.07□□□□□ -1.12
ATG4B-209ENST00000425239 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
ATG4B-209ENST00000425239 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
ATG4B-209ENST00000425239 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
ATG4B-209ENST00000425239 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
ATG4B-209ENST00000425239 MIEN1Q9BRT3 115 aa8.06□□□□□ -1.12
ATG4B-209ENST00000425239 SERF1AO75920 110 aa8.05□□□□□ -1.12
ATG4B-209ENST00000425239 NPC2P61916 151 aa8.05□□□□□ -1.12
ATG4B-209ENST00000425239 DPM2O94777 84 aa8.04□□□□□ -1.12
ATG4B-209ENST00000425239 S100A6P06703 90 aa8.04□□□□□ -1.12
ATG4B-209ENST00000425239 COA6Q5JTJ3 125 aaKnown RBP8.04□□□□□ -1.12
ATG4B-209ENST00000425239 HRCT1Q6UXD1 115 aa8.04□□□□□ -1.12
ATG4B-209ENST00000425239 LITAFQ99732 161 aa8.04□□□□□ -1.12
ATG4B-209ENST00000425239 LGALS3P17931 250 aaKnown RBP8.03□□□□□ -1.12
ATG4B-209ENST00000425239 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
ATG4B-209ENST00000425239 IGKCP01834 107 aa8.02□□□□□ -1.13
ATG4B-209ENST00000425239 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
ATG4B-209ENST00000425239 E9PLD3 99 aa8□□□□□ -1.13
ATG4B-209ENST00000425239 HERVK_113P61574 105 aa8□□□□□ -1.13
ATG4B-209ENST00000425239 CD164Q04900 197 aa8□□□□□ -1.13
ATG4B-209ENST00000425239 Q5XG85 94 aa8□□□□□ -1.13
ATG4B-209ENST00000425239 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
ATG4B-209ENST00000425239 FABP4P15090 132 aa7.99□□□□□ -1.13
ATG4B-209ENST00000425239 SPANXCQ9NY87 97 aa7.99□□□□□ -1.13
ATG4B-209ENST00000425239 DHRS4-AS1Q9P1J3 65 aa7.99□□□□□ -1.13
ATG4B-209ENST00000425239 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
ATG4B-209ENST00000425239 HINT1P49773 126 aaPredicted RBP7.98□□□□□ -1.13
ATG4B-209ENST00000425239 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
ATG4B-209ENST00000425239 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
ATG4B-209ENST00000425239 SMIM29Q86T20 159 aa7.98□□□□□ -1.13
ATG4B-209ENST00000425239 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
ATG4B-209ENST00000425239 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
ATG4B-209ENST00000425239 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
ATG4B-209ENST00000425239 S100A2P29034 98 aa7.96□□□□□ -1.14
ATG4B-209ENST00000425239 HIST3H2BBQ8N257 126 aa7.96□□□□□ -1.14
ATG4B-209ENST00000425239 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
ATG4B-209ENST00000425239 H7C2G1 150 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 TIMM17BO60830 172 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
ATG4B-209ENST00000425239 Q1RN00 199 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 OR13C6PQ8NH95 151 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 SPANXDQ9BXN6 97 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 PRO1933Q9H354 126 aa7.94□□□□□ -1.14
ATG4B-209ENST00000425239 A0A0G2JQZ4 141 aa7.93□□□□□ -1.14
ATG4B-209ENST00000425239 C6orf99Q4VX62 202 aa7.93□□□□□ -1.14
ATG4B-209ENST00000425239 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
ATG4B-209ENST00000425239 COX7BP24311 80 aa7.92□□□□□ -1.14
ATG4B-209ENST00000425239 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
ATG4B-209ENST00000425239 TAL2Q16559 108 aa7.91□□□□□ -1.14
ATG4B-209ENST00000425239 DEFB105AQ8NG35 78 aa7.91□□□□□ -1.14
ATG4B-209ENST00000425239 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
ATG4B-209ENST00000425239 TRBV7-6A0A0J9YX20 115 aa7.9□□□□□ -1.14
ATG4B-209ENST00000425239 AKR1D1P51857 326 aa7.9□□□□□ -1.14
ATG4B-209ENST00000425239 TTTY13Q9BZ97 58 aa7.9□□□□□ -1.14
ATG4B-209ENST00000425239 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
ATG4B-209ENST00000425239 M0R2T5 61 aa7.88□□□□□ -1.15
ATG4B-209ENST00000425239 KRTDAPP60985 99 aa7.88□□□□□ -1.15
ATG4B-209ENST00000425239 LINC00518Q8N0U6 118 aa7.88□□□□□ -1.15
ATG4B-209ENST00000425239 C3orf79P0CE67 100 aa7.87□□□□□ -1.15
ATG4B-209ENST00000425239 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
ATG4B-209ENST00000425239 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
ATG4B-209ENST00000425239 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
ATG4B-209ENST00000425239 C20orf202A1L168 122 aa7.84□□□□□ -1.15
ATG4B-209ENST00000425239 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
ATG4B-209ENST00000425239 USH2AO75445 5202 aa7.84□□□□□ -1.15
ATG4B-209ENST00000425239 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
ATG4B-209ENST00000425239 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
ATG4B-209ENST00000425239 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
ATG4B-209ENST00000425239 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
ATG4B-209ENST00000425239 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
ATG4B-209ENST00000425239 A4D1N5 150 aa7.76□□□□□ -1.17
ATG4B-209ENST00000425239 TCL1BO95988 128 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms