RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 A0A1B0GUT8 65 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 A8MWL6 223 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 AKR1D1P51857 326 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 NDUFA6P56556 154 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 FABP9Q0Z7S8 132 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BKO60814 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BJP06899 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BOP23527 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 S100A2P29034 98 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BBP33778 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BDP58876 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BCP62807 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HERVK_113P63121 156 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST2H2BEQ16778 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 COA6Q5JTJ3 125 aaKnown RBP3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.23□□□□□ -1.89
SDCBP-203ENST00000424270 ZC2HC1BQ5TFG8 222 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BHQ93079 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BNQ99877 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 HIST1H2BMQ99879 126 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 TRAPPC1Q9Y5R8 145 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 V9GYV3 84 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 KMT2DO14686 5537 aa3.23□□□□□ -1.89
SDCBP-203ENST00000424270 SMIM27A0A1W2PRY6 76 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 CKS2P33552 79 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 SEC11AP67812 179 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 C12orf57Q99622 126 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 C20orf78Q9BR46 151 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 CDKN2A-AS1Q9UH64 79 aa3.22□□□□□ -1.89
SDCBP-203ENST00000424270 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 CD164Q04900 197 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 KIAA1644Q3SXP7 199 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 ATP5L2Q7Z4Y8 100 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 SND1-IT1Q9HBX3 110 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 NAT8BQ9UHF3 227 aa3.21□□□□□ -1.9
SDCBP-203ENST00000424270 HIGD1CA8MV81 97 aa3.2□□□□□ -1.9
SDCBP-203ENST00000424270 H7C2G1 150 aa3.2□□□□□ -1.9
SDCBP-203ENST00000424270 MRPL51Q4U2R6 128 aaKnown RBP3.2□□□□□ -1.9
SDCBP-203ENST00000424270 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
SDCBP-203ENST00000424270 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SDCBP-203ENST00000424270 FABP4P15090 132 aa3.19□□□□□ -1.9
SDCBP-203ENST00000424270 TMEM136Q6ZRR5 245 aa3.19□□□□□ -1.9
SDCBP-203ENST00000424270 HIST1H2BLQ99880 126 aa3.19□□□□□ -1.9
SDCBP-203ENST00000424270 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SDCBP-203ENST00000424270 TINCRA0A1B0GVN0 87 aa3.18□□□□□ -1.9
SDCBP-203ENST00000424270 SPINK8P0C7L1 97 aa3.18□□□□□ -1.9
SDCBP-203ENST00000424270 JOSD1Q15040 202 aaPredicted RBP3.18□□□□□ -1.9
SDCBP-203ENST00000424270 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
SDCBP-203ENST00000424270 BAGE3Q86Y29 109 aa3.18□□□□□ -1.9
SDCBP-203ENST00000424270 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
SDCBP-203ENST00000424270 A0A1B0GXF2 115 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 TSTD3H0UI37 97 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 NCR3O14931 201 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 LINC00614P0C842 121 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 PYY3Q5JQD4 70 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 MRPL54Q6P161 138 aaKnown RBP3.17□□□□□ -1.9
SDCBP-203ENST00000424270 MAP1LC3AQ9H492 121 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 ERG28Q9UKR5 140 aa3.17□□□□□ -1.9
SDCBP-203ENST00000424270 A6NDN8 102 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 D6R8Y8 96 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 SERF1AO75920 110 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 FAM104BQ5XKR9 115 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 C2orf66Q6UXQ4 117 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 Q6ZVH6 145 aa3.16□□□□□ -1.9
SDCBP-203ENST00000424270 ZNF625Q96I27 306 aaPredicted RBP3.16□□□□□ -1.9
SDCBP-203ENST00000424270 NPYP01303 97 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 PPBPP02775 128 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 LINC00158P58513 81 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 PCP2Q8IVA1 136 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 Q8NDZ9 215 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 CHCHD1Q96BP2 118 aaKnown RBP3.15□□□□□ -1.91
SDCBP-203ENST00000424270 AMELXQ99217 191 aa3.15□□□□□ -1.91
SDCBP-203ENST00000424270 IGLV5-45A0A087WSX0 123 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 A0A1B0GWB2 263 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 H3BRM9 83 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 COX17Q14061 63 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 SLC25A34Q6PIV7 304 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
SDCBP-203ENST00000424270 C18orf32Q8TCD1 76 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 URB1-AS1Q96HZ7 61 aa3.14□□□□□ -1.91
SDCBP-203ENST00000424270 FAM240AA0A1B0GVK7 77 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 A6NN06 94 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 OBSCN-AS1Q96MR7 158 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 KCNQ1DNQ9H478 68 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 RBM12B-AS1Q9P1G2 102 aa3.13□□□□□ -1.91
SDCBP-203ENST00000424270 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms